RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 RIOK1Q9BRS2 568 aaKnown RBP27.47■■□□□ 1.99
VLDLR-201ENST00000382096 RPAP3Q9H6T3 665 aaPredicted RBP27.47■■□□□ 1.99
VLDLR-201ENST00000382096 RAB11FIP3O75154 756 aa27.46■■□□□ 1.99
VLDLR-201ENST00000382096 ATP2B2Q01814 1243 aa27.46■■□□□ 1.99
VLDLR-201ENST00000382096 NPLOC4Q8TAT6 608 aa27.46■■□□□ 1.99
VLDLR-201ENST00000382096 SENP6Q9GZR1 1112 aaPredicted RBP27.46■■□□□ 1.99
VLDLR-201ENST00000382096 ZNFX1Q9P2E3 1918 aaKnown RBP27.44■■□□□ 1.98
VLDLR-201ENST00000382096 DNM1LO00429 736 aa27.44■■□□□ 1.98
VLDLR-201ENST00000382096 GABPAQ06546 454 aa27.44■■□□□ 1.98
VLDLR-201ENST00000382096 IFIT2P09913 472 aaKnown RBP27.43■■□□□ 1.98
VLDLR-201ENST00000382096 CYBAP13498 195 aa27.43■■□□□ 1.98
VLDLR-201ENST00000382096 CNGA1P29973 690 aa27.43■■□□□ 1.98
VLDLR-201ENST00000382096 CYP2C19P33261 490 aa27.43■■□□□ 1.98
VLDLR-201ENST00000382096 TRPV1Q8NER1 839 aa27.43■■□□□ 1.98
VLDLR-201ENST00000382096 PDE6AP16499 860 aa27.42■■□□□ 1.98
VLDLR-201ENST00000382096 SEPT2Q15019 361 aa27.42■■□□□ 1.98
VLDLR-201ENST00000382096 FAM109BQ6ICB4 259 aaPredicted RBP27.42■■□□□ 1.98
VLDLR-201ENST00000382096 EYSQ5T1H1 3165 aa27.41■■□□□ 1.98
VLDLR-201ENST00000382096 MAGEB6P1A0A0J9YX57 407 aa27.41■■□□□ 1.98
VLDLR-201ENST00000382096 APBB1O00213 710 aa27.41■■□□□ 1.98
VLDLR-201ENST00000382096 POLR3DP05423 398 aaPredicted RBP27.41■■□□□ 1.98
VLDLR-201ENST00000382096 SLC9C2Q5TAH2 1124 aa27.41■■□□□ 1.98
VLDLR-201ENST00000382096 LBHD1Q9BQE6 289 aaPredicted RBP27.41■■□□□ 1.98
VLDLR-201ENST00000382096 BAZ2AQ9UIF9 1905 aaKnown RBP27.41■■□□□ 1.98
VLDLR-201ENST00000382096 COL11A1P12107 1806 aaPredicted RBP27.41■■□□□ 1.98
VLDLR-201ENST00000382096 A0A1W2PRG0 241 aa27.4■■□□□ 1.98
VLDLR-201ENST00000382096 TCRBV5S4A2TA0A5A2 114 aa27.4■■□□□ 1.98
VLDLR-201ENST00000382096 POTEB2H3BUK9 544 aa27.4■■□□□ 1.98
VLDLR-201ENST00000382096 STRNO43815 780 aa27.4■■□□□ 1.98
VLDLR-201ENST00000382096 COG2Q14746 738 aa27.4■■□□□ 1.98
VLDLR-201ENST00000382096 OLFML2BQ68BL8 750 aa27.4■■□□□ 1.98
VLDLR-201ENST00000382096 MOV10L1Q9BXT6 1211 aaKnown RBP27.4■■□□□ 1.98
VLDLR-201ENST00000382096 HOXC10Q9NYD6 342 aa27.4■■□□□ 1.98
VLDLR-201ENST00000382096 GOLIM4O00461 696 aa27.39■■□□□ 1.98
VLDLR-201ENST00000382096 ADORA2AP29274 412 aa27.39■■□□□ 1.98
VLDLR-201ENST00000382096 ATN1P54259 1190 aaPredicted RBP27.39■■□□□ 1.98
VLDLR-201ENST00000382096 SHCBP1Q8NEM2 672 aa27.39■■□□□ 1.98
VLDLR-201ENST00000382096 CRNKL1Q9BZJ0 848 aaKnown RBP27.39■■□□□ 1.98
VLDLR-201ENST00000382096 RTP1P59025 263 aa27.38■■□□□ 1.97
VLDLR-201ENST00000382096 EVX2Q03828 476 aa27.38■■□□□ 1.97
VLDLR-201ENST00000382096 C20orf194Q5TEA3 1177 aa27.38■■□□□ 1.97
VLDLR-201ENST00000382096 DPP9Q86TI2 863 aa27.38■■□□□ 1.97
VLDLR-201ENST00000382096 DNAJC2Q99543 621 aaKnown RBP27.38■■□□□ 1.97
VLDLR-201ENST00000382096 SPATC1LQ9H0A9 340 aa27.38■■□□□ 1.97
VLDLR-201ENST00000382096 MCM9Q9NXL9 1143 aa27.38■■□□□ 1.97
VLDLR-201ENST00000382096 PLXNA1Q9UIW2 1896 aa27.38■■□□□ 1.97
VLDLR-201ENST00000382096 ZNF532Q9HCE3 1301 aa27.38■■□□□ 1.97
VLDLR-201ENST00000382096 MYH7P12883 1935 aa27.37■■□□□ 1.97
VLDLR-201ENST00000382096 ATP5JP18859 108 aa27.37■■□□□ 1.97
VLDLR-201ENST00000382096 TANGO6Q9C0B7 1094 aa27.37■■□□□ 1.97
VLDLR-201ENST00000382096 PRKAG2Q9UGJ0 569 aa27.37■■□□□ 1.97
VLDLR-201ENST00000382096 MPHOSPH10O00566 681 aaKnown RBP27.36■■□□□ 1.97
VLDLR-201ENST00000382096 MB21D1Q8N884 522 aa27.36■■□□□ 1.97
VLDLR-201ENST00000382096 ARRDC4Q8NCT1 418 aa27.36■■□□□ 1.97
VLDLR-201ENST00000382096 GUCD1Q96NT3 240 aa27.36■■□□□ 1.97
VLDLR-201ENST00000382096 SMCHD1A6NHR9 2005 aa27.36■■□□□ 1.97
VLDLR-201ENST00000382096 ERCC3P19447 782 aa27.35■■□□□ 1.97
VLDLR-201ENST00000382096 GJC2Q5T442 439 aaPredicted RBP27.35■■□□□ 1.97
VLDLR-201ENST00000382096 TMEM179Q6ZVK1 233 aa27.35■■□□□ 1.97
VLDLR-201ENST00000382096 DCP1AQ9NPI6 582 aaPredicted RBP27.35■■□□□ 1.97
VLDLR-201ENST00000382096 PAG1Q9NWQ8 432 aa27.35■■□□□ 1.97
VLDLR-201ENST00000382096 SEPT4O43236 478 aa27.34■■□□□ 1.97
VLDLR-201ENST00000382096 KIAA1755Q5JYT7 1200 aa27.34■■□□□ 1.97
VLDLR-201ENST00000382096 HAUS7Q99871 368 aa27.34■■□□□ 1.97
VLDLR-201ENST00000382096 KBTBD13C9JR72 458 aa27.33■■□□□ 1.97
VLDLR-201ENST00000382096 COBLO75128 1261 aa27.33■■□□□ 1.97
VLDLR-201ENST00000382096 SLC39A5Q6ZMH5 540 aa27.33■■□□□ 1.97
VLDLR-201ENST00000382096 ABRAQ8N0Z2 381 aa27.33■■□□□ 1.97
VLDLR-201ENST00000382096 LCORLQ8N3X6 602 aa27.33■■□□□ 1.97
VLDLR-201ENST00000382096 SDR42E1Q8WUS8 393 aa27.33■■□□□ 1.97
VLDLR-201ENST00000382096 BOLA2Q9H3K6 86 aa27.33■■□□□ 1.97
VLDLR-201ENST00000382096 MROH8Q9H579 483 aa27.33■■□□□ 1.97
VLDLR-201ENST00000382096 SLC5A4Q9NY91 659 aa27.33■■□□□ 1.97
VLDLR-201ENST00000382096 SWAP70Q9UH65 585 aa27.33■■□□□ 1.97
VLDLR-201ENST00000382096 ATP11BQ9Y2G3 1177 aa27.33■■□□□ 1.97
VLDLR-201ENST00000382096 DSG3P32926 999 aa27.32■■□□□ 1.96
VLDLR-201ENST00000382096 ADD2P35612 726 aa27.32■■□□□ 1.96
VLDLR-201ENST00000382096 SNX17Q15036 470 aa27.32■■□□□ 1.96
VLDLR-201ENST00000382096 SLC44A5Q8NCS7 719 aa27.32■■□□□ 1.96
VLDLR-201ENST00000382096 LRRCC1Q9C099 1032 aa27.32■■□□□ 1.96
VLDLR-201ENST00000382096 PRUNE2Q8WUY3 3088 aa27.31■■□□□ 1.96
VLDLR-201ENST00000382096 CDH23Q9H251 3354 aa27.31■■□□□ 1.96
VLDLR-201ENST00000382096 VCANP13611 3396 aa27.3■■□□□ 1.96
VLDLR-201ENST00000382096 CYP2D6P10635 497 aa27.3■■□□□ 1.96
VLDLR-201ENST00000382096 ANO1Q5XXA6 986 aa27.3■■□□□ 1.96
VLDLR-201ENST00000382096 SIAH1Q8IUQ4 282 aa27.3■■□□□ 1.96
VLDLR-201ENST00000382096 SH2D4AQ9H788 454 aa27.3■■□□□ 1.96
VLDLR-201ENST00000382096 TMX2Q9Y320 296 aa27.3■■□□□ 1.96
VLDLR-201ENST00000382096 FLOT1O75955 427 aa27.29■■□□□ 1.96
VLDLR-201ENST00000382096 ZNF697Q5TEC3 545 aa27.29■■□□□ 1.96
VLDLR-201ENST00000382096 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.29■■□□□ 1.96
VLDLR-201ENST00000382096 ATG4CQ96DT6 458 aa27.29■■□□□ 1.96
VLDLR-201ENST00000382096 MAML3Q96JK9 1138 aa27.29■■□□□ 1.96
VLDLR-201ENST00000382096 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.29■■□□□ 1.96
VLDLR-201ENST00000382096 ARHGEF10LQ9HCE6 1279 aa27.29■■□□□ 1.96
VLDLR-201ENST00000382096 ICA1Q05084 483 aa27.28■■□□□ 1.96
VLDLR-201ENST00000382096 PLS1Q14651 629 aa27.28■■□□□ 1.96
VLDLR-201ENST00000382096 UBE3CQ15386 1083 aa27.28■■□□□ 1.96
VLDLR-201ENST00000382096 TRIM60Q495X7 471 aa27.28■■□□□ 1.96
VLDLR-201ENST00000382096 C1orf53Q5VUE5 145 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms