RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 OAS2P29728 719 aaKnown RBP10.18□□□□□ -0.78
GPNMB-202ENST00000381990 CDC27P30260 824 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 RCAN1P53805 252 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 SP8Q8IXZ3 490 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 TBC1D16Q8TBP0 767 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 UBAC1Q9BSL1 405 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 DCP1AQ9NPI6 582 aaPredicted RBP10.18□□□□□ -0.78
GPNMB-202ENST00000381990 HPSEQ9Y251 543 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 TNS1Q9HBL0 1735 aaKnown RBP10.17□□□□□ -0.78
GPNMB-202ENST00000381990 USP17L12C9JPN9 530 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 USP17L21D6R901 530 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 PPEF1O14829 653 aaPredicted RBP10.17□□□□□ -0.78
GPNMB-202ENST00000381990 POLR3GO15318 223 aaPredicted RBP10.17□□□□□ -0.78
GPNMB-202ENST00000381990 RXRAP19793 462 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 PPP2R3AQ06190 1150 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 BRD3Q15059 726 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 TMEM139Q8IV31 216 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 STK11IPQ8N1F8 1099 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 GOLGA1Q92805 767 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 LTBP1Q14766 1721 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 MYH2Q9UKX2 1941 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 LAMB1P07942 1786 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 CYP2D7A0A087X1C5 515 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 POLR3DP05423 398 aaPredicted RBP10.17□□□□□ -0.78
GPNMB-202ENST00000381990 LDHCP07864 332 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 NPR1P16066 1061 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 KIF23Q02241 960 aaPredicted RBP10.17□□□□□ -0.78
GPNMB-202ENST00000381990 NTRK3Q16288 839 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 SBK1Q52WX2 424 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 GOLGA5Q8TBA6 731 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 BAG1Q99933 345 aaPredicted RBP10.17□□□□□ -0.78
GPNMB-202ENST00000381990 ZKSCAN3Q9BRR0 538 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 FAM217BQ9NTX9 383 aaPredicted RBP10.17□□□□□ -0.78
GPNMB-202ENST00000381990 ARPP21Q9UBL0 812 aaPredicted RBP10.17□□□□□ -0.78
GPNMB-202ENST00000381990 POLLQ9UGP5 575 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 FEZ2Q9UHY8 353 aaPredicted RBP10.17□□□□□ -0.78
GPNMB-202ENST00000381990 HOOK1Q9UJC3 728 aaKnown RBP10.17□□□□□ -0.78
GPNMB-202ENST00000381990 ATP6V0A2Q9Y487 856 aa10.17□□□□□ -0.78
GPNMB-202ENST00000381990 POTEB2H3BUK9 544 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 FANCGO15287 622 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 SASH3O75995 380 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 SRGNP10124 158 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 TXLNAP40222 546 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 TUBB2AQ13885 445 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 SEC23AQ15436 765 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 ZSCAN26Q16670 478 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 IPO4Q8TEX9 1081 aaKnown RBP10.16□□□□□ -0.78
GPNMB-202ENST00000381990 HNRNPLLQ8WVV9 542 aaKnown RBP10.16□□□□□ -0.78
GPNMB-202ENST00000381990 MYL10Q9BUA6 226 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 TUBB2BQ9BVA1 445 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 STK36Q9NRP7 1315 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 C6orf229H3BNL8 230 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 SMIM22K7EJ46 135 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 ORC4O43929 436 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 BAG3O95817 575 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 MMP10P09238 476 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 PDE6BP35913 854 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 IARSP41252 1262 aaKnown RBP10.16□□□□□ -0.78
GPNMB-202ENST00000381990 PPP4CP60510 307 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 GNG11P61952 73 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 TBX2Q13207 712 aaPredicted RBP10.16□□□□□ -0.78
GPNMB-202ENST00000381990 KRBA2Q6ZNG9 492 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 CERS3Q8IU89 383 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 IQUBQ8NA54 791 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 SMARCE1Q969G3 411 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 FUT8Q9BYC5 575 aa10.16□□□□□ -0.78
GPNMB-202ENST00000381990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.16□□□□□ -0.78
GPNMB-202ENST00000381990 CCDC196A0A1B0GTZ2 297 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 SEC31AO94979 1220 aaKnown RBP10.15□□□□□ -0.78
GPNMB-202ENST00000381990 IFNAR1P17181 557 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 RTN1Q16799 776 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 OTUD7BQ6GQQ9 843 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 ZNF654Q8IZM8 581 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 NEK11Q8NG66 645 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 ALG1Q9BT22 464 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.15□□□□□ -0.78
GPNMB-202ENST00000381990 DACH1Q9UI36 760 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 MROH7-TTC4A0A0A0MT08 1334 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 TNKSO95271 1327 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 RANBP6O60518 1105 aaKnown RBP10.15□□□□□ -0.78
GPNMB-202ENST00000381990 ALDH1B1P30837 517 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 PPP2R5BQ15173 497 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 GRIK5Q16478 980 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 SPECC1LQ69YQ0 1117 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 IQCA1Q86XH1 822 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 TBC1D22AQ8WUA7 517 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 PHKBQ93100 1093 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 KIFC2Q96AC6 838 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 ZSCAN10Q96SZ4 725 aaPredicted RBP10.15□□□□□ -0.78
GPNMB-202ENST00000381990 PARD6BQ9BYG5 372 aa10.15□□□□□ -0.78
GPNMB-202ENST00000381990 MAP2K7O14733 419 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 FMNL1O95466 1100 aaPredicted RBP10.14□□□□□ -0.79
GPNMB-202ENST00000381990 KCNA4P22459 653 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 SSRP1Q08945 709 aaKnown RBP10.14□□□□□ -0.79
GPNMB-202ENST00000381990 GNL2Q13823 731 aaKnown RBP10.14□□□□□ -0.79
GPNMB-202ENST00000381990 DIXDC1Q155Q3 683 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 RESP18Q5W5W9 173 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 ENAHQ8N8S7 591 aaPredicted RBP10.14□□□□□ -0.79
GPNMB-202ENST00000381990 DPF2Q92785 391 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 RASSF4Q9H2L5 321 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms