RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 ATP6V1G1O75348 118 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 DMPKQ09013 629 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 PARD6BQ9BYG5 372 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 STRN4Q9NRL3 753 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 RTEL1Q9NZ71 1219 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 CLIC4Q9Y696 253 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 CCDC160A6NGH7 325 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 EIF4A1P60842 406 aaKnown RBP13.11□□□□□ -0.31
NPHS1-202ENST00000378910 PTPN21Q16825 1174 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 SRGAP1Q7Z6B7 1085 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 NSUN7Q8NE18 718 aaKnown RBP13.11□□□□□ -0.31
NPHS1-202ENST00000378910 MORC4Q8TE76 937 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 CTNND2Q9UQB3 1225 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 FHOD1Q9Y613 1164 aa13.11□□□□□ -0.31
NPHS1-202ENST00000378910 B4E1Z4 1266 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 COQ9O75208 318 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 LACTBP83111 547 aaPredicted RBP13.1□□□□□ -0.31
NPHS1-202ENST00000378910 TRIM14Q14142 442 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 CCDC152Q4G0S7 254 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 GKAP1Q5VSY0 366 aaPredicted RBP13.1□□□□□ -0.31
NPHS1-202ENST00000378910 SND1Q7KZF4 910 aaKnown RBP eCLIP13.1□□□□□ -0.31
NPHS1-202ENST00000378910 MPHOSPH6Q99547 160 aaKnown RBP13.1□□□□□ -0.31
NPHS1-202ENST00000378910 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
NPHS1-202ENST00000378910 CDC23Q9UJX2 597 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 ZNF232Q9UNY5 417 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 PPP1R7Q15435 360 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 ZNF827Q17R98 1081 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 GRAMD4Q6IC98 578 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 CC2D1AQ6P1N0 951 aaPredicted RBP13.1□□□□□ -0.31
NPHS1-202ENST00000378910 DSCC1Q9BVC3 393 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 TCEAL9Q9UHQ7 104 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 hCG_2014768A0A024R1R8 64 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 OGFOD1Q8N543 542 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 WWC3Q9ULE0 1092 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 RNMTO43148 476 aaKnown RBP13.1□□□□□ -0.31
NPHS1-202ENST00000378910 TMED1Q13445 227 aa13.1□□□□□ -0.31
NPHS1-202ENST00000378910 ZNF589Q86UQ0 364 aaPredicted RBP13.1□□□□□ -0.31
NPHS1-202ENST00000378910 POGZQ7Z3K3 1410 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 VWA3AA6NCI4 1184 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 IKBKBO14920 756 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 SH3BP5O60239 455 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 STARD3NLO95772 234 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 CYP21A2P08686 494 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 CUL4BQ13620 913 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 CCDC6Q16204 474 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 TSNAXIP1Q2TAA8 658 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 ZNF483Q8TF39 744 aaPredicted RBP13.09□□□□□ -0.31
NPHS1-202ENST00000378910 CALML4Q96GE6 196 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 RHBDL2Q9NX52 303 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 TAB2Q9NYJ8 693 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 SATB2Q9UPW6 733 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 MAPK8IP1Q9UQF2 711 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 PCDHA5Q9Y5H7 936 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 RPS6KL1Q9Y6S9 549 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 KRT38O76015 456 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 UQCRFS1P1P0C7P4 283 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 MYBPC2Q14324 1141 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 THEMIS2Q5TEJ8 643 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 RCSD1Q6JBY9 416 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 CPLX4Q7Z7G2 160 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 MFN1Q8IWA4 741 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 ESR2Q92731 530 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 TEKT1Q969V4 418 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 SERTAD1Q9UHV2 236 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 GCOM1H8Y6P7 765 aaPredicted RBP13.09□□□□□ -0.31
NPHS1-202ENST00000378910 MYZAPP0CAP1 466 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 IKQ13123 557 aaPredicted RBP13.09□□□□□ -0.31
NPHS1-202ENST00000378910 PPFIA1Q13136 1202 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 JAKMIP2Q96AA8 810 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 SPATA17Q96L03 361 aa13.09□□□□□ -0.31
NPHS1-202ENST00000378910 VIMP08670 466 aaKnown RBP13.08□□□□□ -0.31
NPHS1-202ENST00000378910 IMPDH2P12268 514 aa13.08□□□□□ -0.31
NPHS1-202ENST00000378910 FERP16591 822 aa13.08□□□□□ -0.31
NPHS1-202ENST00000378910 PDIA3P30101 505 aaKnown RBP13.08□□□□□ -0.31
NPHS1-202ENST00000378910 RAB34Q9BZG1 259 aa13.08□□□□□ -0.31
NPHS1-202ENST00000378910 RNF40O75150 1001 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 TROVE2P10155 538 aaKnown RBP eCLIP13.08□□□□□ -0.32
NPHS1-202ENST00000378910 GNAT1P11488 350 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 ATP1A3P13637 1013 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 ASIC1P78348 528 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 TBC1D8BQ0IIM8 1120 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 IFT88Q13099 833 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 AATKQ6ZMQ8 1374 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 ASXL2Q76L83 1435 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 CCDC170Q8IYT3 715 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 PRDM11Q9NQV5 511 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.08□□□□□ -0.32
NPHS1-202ENST00000378910 ARHGEF10O15013 1369 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 RASSF10A6NK89 507 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 KRT2P35908 639 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 USP5P45974 858 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 GCKRQ14397 625 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 C8orf74Q6P047 294 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 ANKS4BQ8N8V4 417 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 LMBR1Q8WVP7 490 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 APPBP2Q92624 585 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 TMEM87BQ96K49 555 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 MYL10Q9BUA6 226 aa13.08□□□□□ -0.32
NPHS1-202ENST00000378910 METTL22Q9BUU2 404 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms