RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 DDB1Q16531 1140 aa10.72□□□□□ -0.69
H3F3A-201ENST00000366813 KIAA0319Q5VV43 1072 aa10.72□□□□□ -0.69
H3F3A-201ENST00000366813 CDPF1Q6NVV7 123 aa10.72□□□□□ -0.69
H3F3A-201ENST00000366813 CRYBG1Q9Y4K1 1723 aa10.72□□□□□ -0.69
H3F3A-201ENST00000366813 KIF1BO60333 1816 aa10.72□□□□□ -0.69
H3F3A-201ENST00000366813 ATP7BP35670 1465 aa10.71□□□□□ -0.69
H3F3A-201ENST00000366813 IFT172Q9UG01 1749 aa10.71□□□□□ -0.69
H3F3A-201ENST00000366813 GPR182O15218 404 aa10.71□□□□□ -0.69
H3F3A-201ENST00000366813 SPINK2P20155 84 aa10.71□□□□□ -0.69
H3F3A-201ENST00000366813 DTX1Q86Y01 620 aa10.71□□□□□ -0.69
H3F3A-201ENST00000366813 DMRTB1Q96MA1 342 aa10.71□□□□□ -0.69
H3F3A-201ENST00000366813 CORO1BQ9BR76 489 aa10.71□□□□□ -0.69
H3F3A-201ENST00000366813 KRTAP9-2Q9BYQ4 174 aa10.71□□□□□ -0.69
H3F3A-201ENST00000366813 OAS3Q9Y6K5 1087 aaKnown RBP10.71□□□□□ -0.69
H3F3A-201ENST00000366813 PARP4Q9UKK3 1724 aaKnown RBP10.7□□□□□ -0.7
H3F3A-201ENST00000366813 TOMM70O94826 608 aa10.7□□□□□ -0.7
H3F3A-201ENST00000366813 ORC1Q13415 861 aa10.7□□□□□ -0.7
H3F3A-201ENST00000366813 NPAS4Q8IUM7 802 aa10.7□□□□□ -0.7
H3F3A-201ENST00000366813 C2CD4AQ8NCU7 369 aaPredicted RBP10.7□□□□□ -0.7
H3F3A-201ENST00000366813 YTHDC2Q9H6S0 1430 aaKnown RBP10.69□□□□□ -0.7
H3F3A-201ENST00000366813 TREHO43280 583 aa10.69□□□□□ -0.7
H3F3A-201ENST00000366813 F13BP05160 661 aa10.69□□□□□ -0.7
H3F3A-201ENST00000366813 NGDNQ8NEJ9 315 aaKnown RBP10.69□□□□□ -0.7
H3F3A-201ENST00000366813 PRR36Q9H6K5 1346 aa10.69□□□□□ -0.7
H3F3A-201ENST00000366813 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.68□□□□□ -0.7
H3F3A-201ENST00000366813 PAX4O43316 350 aa10.68□□□□□ -0.7
H3F3A-201ENST00000366813 DSC3Q14574 896 aa10.68□□□□□ -0.7
H3F3A-201ENST00000366813 AKAP4Q5JQC9 854 aa10.68□□□□□ -0.7
H3F3A-201ENST00000366813 DYMQ7RTS9 669 aa10.68□□□□□ -0.7
H3F3A-201ENST00000366813 ALKBH8Q96BT7 664 aaKnown RBP10.68□□□□□ -0.7
H3F3A-201ENST00000366813 PRAM1Q96QH2 718 aa10.68□□□□□ -0.7
H3F3A-201ENST00000366813 NIF3L1Q9GZT8 377 aa10.68□□□□□ -0.7
H3F3A-201ENST00000366813 NPHS2Q9NP85 383 aa10.68□□□□□ -0.7
H3F3A-201ENST00000366813 ANKARQ7Z5J8 1434 aa10.68□□□□□ -0.7
H3F3A-201ENST00000366813 GADD45BO75293 160 aaPredicted RBP10.67□□□□□ -0.7
H3F3A-201ENST00000366813 ADH5P11766 374 aa10.67□□□□□ -0.7
H3F3A-201ENST00000366813 HOXA10P31260 410 aaPredicted RBP10.67□□□□□ -0.7
H3F3A-201ENST00000366813 TBC1D32Q96NH3 1257 aa10.67□□□□□ -0.7
H3F3A-201ENST00000366813 NRSN2Q9GZP1 204 aa10.67□□□□□ -0.7
H3F3A-201ENST00000366813 PPLO60437 1756 aa10.67□□□□□ -0.7
H3F3A-201ENST00000366813 AATKQ6ZMQ8 1374 aa10.66□□□□□ -0.7
H3F3A-201ENST00000366813 ADAMTS4O75173 837 aa10.66□□□□□ -0.7
H3F3A-201ENST00000366813 METTL22Q9BUU2 404 aaPredicted RBP10.66□□□□□ -0.7
H3F3A-201ENST00000366813 HIRIP3Q9BW71 556 aaPredicted RBP10.66□□□□□ -0.7
H3F3A-201ENST00000366813 KNDC1Q76NI1 1749 aa10.66□□□□□ -0.7
H3F3A-201ENST00000366813 WDR90Q96KV7 1748 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 ROCK1Q13464 1354 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 LRRC37A3O60309 1634 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 KRTAP9-6A0A140TA67 174 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 HSPA1AP0DMV8 641 aaKnown RBP10.65□□□□□ -0.7
H3F3A-201ENST00000366813 HSPA1BP0DMV9 641 aaKnown RBP10.65□□□□□ -0.7
H3F3A-201ENST00000366813 RAB6AP20340 208 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 PLCB3Q01970 1234 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 FMR1Q06787 632 aaKnown RBP eCLIP10.65□□□□□ -0.7
H3F3A-201ENST00000366813 MAP7Q14244 749 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 COL19A1Q14993 1142 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 CCDC74AQ96AQ1 378 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 DNAJC25Q9H1X3 360 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 ZNF576Q9H609 170 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 CRB1P82279 1406 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 PNPLA7Q6ZV29 1317 aa10.65□□□□□ -0.7
H3F3A-201ENST00000366813 PHRF1Q9P1Y6 1649 aaKnown RBP10.65□□□□□ -0.71
H3F3A-201ENST00000366813 EIF1AYO14602 144 aaKnown RBP10.64□□□□□ -0.71
H3F3A-201ENST00000366813 B3GALT4O96024 378 aa10.64□□□□□ -0.71
H3F3A-201ENST00000366813 NFICP08651 508 aa10.64□□□□□ -0.71
H3F3A-201ENST00000366813 FOSL1P15407 271 aa10.64□□□□□ -0.71
H3F3A-201ENST00000366813 TAL1P17542 331 aaPredicted RBP10.64□□□□□ -0.71
H3F3A-201ENST00000366813 PDE3AQ14432 1141 aa10.64□□□□□ -0.71
H3F3A-201ENST00000366813 CPSF6Q16630 551 aaKnown RBP eCLIP10.64□□□□□ -0.71
H3F3A-201ENST00000366813 RGL3Q3MIN7 710 aa10.64□□□□□ -0.71
H3F3A-201ENST00000366813 EZH1Q92800 747 aaPredicted RBP10.64□□□□□ -0.71
H3F3A-201ENST00000366813 ACSBG1Q96GR2 724 aa10.64□□□□□ -0.71
H3F3A-201ENST00000366813 ANGEL1Q9UNK9 670 aaKnown RBP10.64□□□□□ -0.71
H3F3A-201ENST00000366813 AP4E1Q9UPM8 1137 aa10.64□□□□□ -0.71
H3F3A-201ENST00000366813 ACTL7BQ9Y614 415 aa10.64□□□□□ -0.71
H3F3A-201ENST00000366813 BCL9O00512 1426 aa10.64□□□□□ -0.71
H3F3A-201ENST00000366813 COL5A2P05997 1499 aaPredicted RBP10.64□□□□□ -0.71
H3F3A-201ENST00000366813 CYP26A1O43174 497 aa10.63□□□□□ -0.71
H3F3A-201ENST00000366813 CTSBP07858 339 aa10.63□□□□□ -0.71
H3F3A-201ENST00000366813 ITPKAP23677 461 aa10.63□□□□□ -0.71
H3F3A-201ENST00000366813 ITGAEP38570 1179 aa10.63□□□□□ -0.71
H3F3A-201ENST00000366813 ASPAP45381 313 aa10.63□□□□□ -0.71
H3F3A-201ENST00000366813 DUSP27Q5VZP5 1158 aa10.63□□□□□ -0.71
H3F3A-201ENST00000366813 NMRK2Q9NPI5 230 aa10.63□□□□□ -0.71
H3F3A-201ENST00000366813 POGKQ9P215 609 aa10.63□□□□□ -0.71
H3F3A-201ENST00000366813 PRKAG2Q9UGJ0 569 aa10.63□□□□□ -0.71
H3F3A-201ENST00000366813 PAPPAQ13219 1627 aa10.63□□□□□ -0.71
H3F3A-201ENST00000366813 TOPAZ1Q8N9V7 1692 aa10.63□□□□□ -0.71
H3F3A-201ENST00000366813 LMO7Q8WWI1 1683 aa10.63□□□□□ -0.71
H3F3A-201ENST00000366813 P4HBP07237 508 aaKnown RBP10.62□□□□□ -0.71
H3F3A-201ENST00000366813 TOM1L2Q6ZVM7 507 aa10.62□□□□□ -0.71
H3F3A-201ENST00000366813 ZAR1Q86SH2 424 aa10.62□□□□□ -0.71
H3F3A-201ENST00000366813 SHISA5Q8N114 240 aa10.62□□□□□ -0.71
H3F3A-201ENST00000366813 TRIM56Q9BRZ2 755 aaKnown RBP10.62□□□□□ -0.71
H3F3A-201ENST00000366813 PPP4R2Q9NY27 417 aa10.62□□□□□ -0.71
H3F3A-201ENST00000366813 TRAK1Q9UPV9 953 aa10.62□□□□□ -0.71
H3F3A-201ENST00000366813 CPDO75976 1380 aa10.62□□□□□ -0.71
H3F3A-201ENST00000366813 ECEL1O95672 775 aa10.61□□□□□ -0.71
H3F3A-201ENST00000366813 ADMP35318 185 aa10.61□□□□□ -0.71
H3F3A-201ENST00000366813 PTPN12Q05209 780 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms