RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 IRF5Q13568 498 aa12.38□□□□□ -0.43
YBX3-203ENST00000366286 MTFR1Q15390 333 aa12.38□□□□□ -0.43
YBX3-203ENST00000366286 PLEKHM2Q8IWE5 1019 aa12.38□□□□□ -0.43
YBX3-203ENST00000366286 NACAP1Q9BZK3 213 aa12.38□□□□□ -0.43
YBX3-203ENST00000366286 TANGO6Q9C0B7 1094 aa12.38□□□□□ -0.43
YBX3-203ENST00000366286 NAPBQ9H115 298 aa12.38□□□□□ -0.43
YBX3-203ENST00000366286 SH2D4AQ9H788 454 aa12.38□□□□□ -0.43
YBX3-203ENST00000366286 ZNFX1Q9P2E3 1918 aaKnown RBP12.38□□□□□ -0.43
YBX3-203ENST00000366286 MKI67P46013 3256 aaKnown RBP12.38□□□□□ -0.43
YBX3-203ENST00000366286 PLXNA1Q9UIW2 1896 aa12.38□□□□□ -0.43
YBX3-203ENST00000366286 A0A0D9SFI3 127 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 TRIM6-TRIM34B2RNG4 842 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 EEF2P13639 858 aaKnown RBP12.37□□□□□ -0.43
YBX3-203ENST00000366286 ATP2B2Q01814 1243 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 Q3C1V9 767 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 LBX2Q6XYB7 198 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 SPICE1Q8N0Z3 855 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 PXYLP1Q8TE99 480 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 LPAR1Q92633 364 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 FAM227BQ96M60 508 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.37□□□□□ -0.43
YBX3-203ENST00000366286 PORCNQ9H237 461 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 VCPKMTQ9H867 229 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 KANSL2Q9H9L4 492 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 MKNK2Q9HBH9 465 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 BIN2Q9UBW5 565 aaPredicted RBP12.37□□□□□ -0.43
YBX3-203ENST00000366286 TMX2Q9Y320 296 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 RABGAP1Q9Y3P9 1069 aa12.37□□□□□ -0.43
YBX3-203ENST00000366286 PLIN4Q96Q06 1357 aa12.36□□□□□ -0.43
YBX3-203ENST00000366286 PRDM1O75626 825 aa12.36□□□□□ -0.43
YBX3-203ENST00000366286 INHAP05111 366 aa12.36□□□□□ -0.43
YBX3-203ENST00000366286 CCL5P13501 91 aa12.36□□□□□ -0.43
YBX3-203ENST00000366286 MAPK4P31152 587 aa12.36□□□□□ -0.43
YBX3-203ENST00000366286 UBXN2AP68543 259 aa12.36□□□□□ -0.43
YBX3-203ENST00000366286 VPS53Q5VIR6 699 aa12.36□□□□□ -0.43
YBX3-203ENST00000366286 RILPL2Q969X0 211 aa12.36□□□□□ -0.43
YBX3-203ENST00000366286 OSBPL3Q9H4L5 887 aa12.36□□□□□ -0.43
YBX3-203ENST00000366286 HELLSQ9NRZ9 838 aa12.36□□□□□ -0.43
YBX3-203ENST00000366286 BTBD7Q9P203 1132 aa12.36□□□□□ -0.43
YBX3-203ENST00000366286 WDR46O15213 610 aaKnown RBP12.35□□□□□ -0.43
YBX3-203ENST00000366286 PPARAQ07869 468 aa12.35□□□□□ -0.43
YBX3-203ENST00000366286 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
YBX3-203ENST00000366286 GPR142Q7Z601 462 aa12.35□□□□□ -0.43
YBX3-203ENST00000366286 SOCS4Q8WXH5 440 aa12.35□□□□□ -0.43
YBX3-203ENST00000366286 SHISA4Q96DD7 197 aa12.35□□□□□ -0.43
YBX3-203ENST00000366286 UNC93B1Q9H1C4 597 aa12.35□□□□□ -0.43
YBX3-203ENST00000366286 GJD2Q9UKL4 321 aa12.35□□□□□ -0.43
YBX3-203ENST00000366286 PDE4DIPQ5VU43 2346 aa12.35□□□□□ -0.43
YBX3-203ENST00000366286 ALPK3Q96L96 1907 aa12.35□□□□□ -0.43
YBX3-203ENST00000366286 IGKV6D-41A0A0C4DH26 115 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 RAD21O60216 631 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 FLOT1O75955 427 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 CCNA1P78396 465 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 PDE4BQ07343 736 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 COG2Q14746 738 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 MCMDC2Q4G0Z9 681 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 ZNF589Q86UQ0 364 aaPredicted RBP12.34□□□□□ -0.43
YBX3-203ENST00000366286 TICAM2Q86XR7 235 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 CCAR1Q8IX12 1150 aaKnown RBP12.34□□□□□ -0.43
YBX3-203ENST00000366286 NUDT12Q9BQG2 462 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 RNF208Q9H0X6 261 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 ZNF287Q9HBT7 754 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 GOPCQ9HD26 462 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 CCDC171Q6TFL3 1326 aa12.34□□□□□ -0.43
YBX3-203ENST00000366286 HMGCRP04035 888 aa12.33□□□□□ -0.44
YBX3-203ENST00000366286 SLC3A2P08195 630 aaKnown RBP12.33□□□□□ -0.44
YBX3-203ENST00000366286 CYP2B6P20813 491 aa12.33□□□□□ -0.44
YBX3-203ENST00000366286 DSG3P32926 999 aa12.33□□□□□ -0.44
YBX3-203ENST00000366286 CTDSPL2Q05D32 466 aa12.33□□□□□ -0.44
YBX3-203ENST00000366286 MORN1Q5T089 497 aa12.33□□□□□ -0.44
YBX3-203ENST00000366286 FAM83BQ5T0W9 1011 aa12.33□□□□□ -0.44
YBX3-203ENST00000366286 WDR78Q5VTH9 848 aa12.33□□□□□ -0.44
YBX3-203ENST00000366286 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
YBX3-203ENST00000366286 PLEKHH3Q7Z736 793 aa12.33□□□□□ -0.44
YBX3-203ENST00000366286 ZNF444Q8N0Y2 327 aaPredicted RBP12.33□□□□□ -0.44
YBX3-203ENST00000366286 TRIB2Q92519 343 aa12.33□□□□□ -0.44
YBX3-203ENST00000366286 ATG4CQ96DT6 458 aa12.33□□□□□ -0.44
YBX3-203ENST00000366286 CEP95Q96GE4 821 aa12.33□□□□□ -0.44
YBX3-203ENST00000366286 CWC22Q9HCG8 908 aaKnown RBP12.33□□□□□ -0.44
YBX3-203ENST00000366286 NYAP2Q9P242 653 aa12.33□□□□□ -0.44
YBX3-203ENST00000366286 GJB1P08034 283 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 TSPY3P0CV98 308 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 TSPY8P0CW00 308 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 SDSP20132 328 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 PDE4AP27815 886 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 RGS2P41220 211 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 GJA8P48165 433 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 TRIM32Q13049 653 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 FAM47AQ5JRC9 791 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 USP6NLQ92738 828 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 APBA2Q99767 749 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 FBXO28Q9NVF7 368 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 HOXC10Q9NYD6 342 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.32□□□□□ -0.44
YBX3-203ENST00000366286 TACC3Q9Y6A5 838 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 ZMYM6O95789 1325 aa12.32□□□□□ -0.44
YBX3-203ENST00000366286 NDUFB10O96000 172 aa12.31□□□□□ -0.44
YBX3-203ENST00000366286 HSPD1P10809 573 aaKnown RBP12.31□□□□□ -0.44
YBX3-203ENST00000366286 XRCC5P13010 732 aaKnown RBP12.31□□□□□ -0.44
YBX3-203ENST00000366286 ZKSCAN1P17029 563 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms