RNA–Protein interactions for RNA: ENST00000365052.1

RNU1-43P-201, Transcript of RNA, U1 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU1-43P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-43P-201ENST00000365052 PRPF38BQ5VTL8 546 aaKnown RBP6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 GPR142Q7Z601 462 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 IFNL3Q8IZI9 196 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 ZNF444Q8N0Y2 327 aaPredicted RBP6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 NKX2-3Q8TAU0 364 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 PXYLP1Q8TE99 480 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 TRIB2Q92519 343 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 RILPL2Q969X0 211 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 SHISA4Q96DD7 197 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 C12orf42Q96LP6 360 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 CCDC17Q96LX7 622 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 LNPKQ9C0E8 428 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 INCENPQ9NQS7 918 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 HOXC10Q9NYD6 342 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 CLIP2Q9UDT6 1046 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 TMX2Q9Y320 296 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 RABGAP1Q9Y3P9 1069 aa6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 KIAA0100Q14667 2235 aaKnown RBP6.33□□□□□ -1.4
RNU1-43P-201ENST00000365052 TTC41PQ6P2S7 1318 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 TRIM6-TRIM34B2RNG4 842 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 FLOT1O75955 427 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 ZFYP08048 801 aaPredicted RBP6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 PTPREP23469 700 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 CNGA1P29973 690 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 MAPK4P31152 587 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 DSG3P32926 999 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 CCNA1P78396 465 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 CTDSPL2Q05D32 466 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 CACNB2Q08289 660 aaPredicted RBP6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 LRRFIP1Q32MZ4 808 aaKnown RBP6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 SBK1Q52WX2 424 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 FAM47AQ5JRC9 791 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 ZMYM1Q5SVZ6 1142 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 LBX2Q6XYB7 198 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 NCAPG2Q86XI2 1143 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 NPLOC4Q8TAT6 608 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 GCC1Q96CN9 775 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 ATG4CQ96DT6 458 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 PAWRQ96IZ0 340 aaKnown RBP6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 NUP88Q99567 741 aaPredicted RBP6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 RWDD1Q9H446 243 aaPredicted RBP6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 VCPKMTQ9H867 229 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 EPB41L4AQ9HCS5 686 aaPredicted RBP6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 HMX1Q9NP08 348 aaPredicted RBP6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 FBXO28Q9NVF7 368 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 ARPP21Q9UBL0 812 aaPredicted RBP6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 MTMR7Q9Y216 660 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 IVNS1ABPQ9Y6Y0 642 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 HTTP42858 3142 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 MYH8P13535 1937 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 PLXNB2O15031 1838 aa6.32□□□□□ -1.4
RNU1-43P-201ENST00000365052 RPTORQ8N122 1335 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 H0YGN5 161 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 FARP2O94887 1054 aaPredicted RBP6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 HMGCRP04035 888 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 GNAT2P19087 354 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 RASA1P20936 1047 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 CCND3P30281 292 aaPredicted RBP6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 RGS2P41220 211 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 PDE1AP54750 535 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 MAP2K5Q13163 448 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 HDAC1Q13547 482 aaPredicted RBP6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 PRAMEF19Q5SWL8 479 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 MORN1Q5T089 497 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 FAM83BQ5T0W9 1011 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 ANO1Q5XXA6 986 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 DPP9Q86TI2 863 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 DIS3LQ8TF46 1054 aaKnown RBP6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 GTF3C2Q8WUA4 911 aaPredicted RBP6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 USP6NLQ92738 828 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 MOV10L1Q9BXT6 1211 aaKnown RBP6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 SPATC1LQ9H0A9 340 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 NAPBQ9H115 298 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 SH2D4AQ9H788 454 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 KANSL2Q9H9L4 492 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 TOMM22Q9NS69 142 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 FLRT1Q9NZU1 646 aa6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 ISY1Q9ULR0 285 aaKnown RBP6.31□□□□□ -1.4
RNU1-43P-201ENST00000365052 DDX60LQ5H9U9 1706 aaKnown RBP6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 SALL3Q9BXA9 1300 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 BRCA2P51587 3418 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 SLC15A5A6NIM6 579 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 F5H6K3 240 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 WDR46O15213 610 aaKnown RBP6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 COBLO75128 1261 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 MYCNP04198 464 aaPredicted RBP6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 PRKAR2AP13861 404 aaKnown RBP6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 ZKSCAN1P17029 563 aaPredicted RBP6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 ERCC3P19447 782 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 CYP2C19P33261 490 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 TFAP4Q01664 338 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 KLRC3Q07444 240 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 PPARAQ07869 468 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 TMEM132BQ14DG7 1078 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 RRP12Q5JTH9 1297 aaKnown RBP6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 VPS53Q5VIR6 699 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 GIMAP6Q6P9H5 292 aa6.3□□□□□ -1.4
RNU1-43P-201ENST00000365052 CPXCR1Q8N123 301 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms