RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 NBPF26B4DH59 902 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 SH3BP5O60239 455 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 KIF5CO60282 957 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 ZNF189O75820 626 aaPredicted RBP11.12□□□□□ -0.63
SIN3A-201ENST00000360439 TRIM42Q8IWZ5 723 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 NBPF15Q8N660 670 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
SIN3A-201ENST00000360439 UIMC1Q96RL1 719 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 PYM1Q9BRP8 204 aaKnown RBP11.12□□□□□ -0.63
SIN3A-201ENST00000360439 BSDC1Q9NW68 430 aaPredicted RBP11.12□□□□□ -0.63
SIN3A-201ENST00000360439 PDE8BO95263 885 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 PTH1RQ03431 593 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 ACBD5Q5T8D3 534 aaPredicted RBP11.12□□□□□ -0.63
SIN3A-201ENST00000360439 RC3H1Q5TC82 1133 aaKnown RBP11.12□□□□□ -0.63
SIN3A-201ENST00000360439 AOPEPQ8N6M6 819 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 IL17RAQ96F46 866 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 GPR101Q96P66 508 aaPredicted RBP11.12□□□□□ -0.63
SIN3A-201ENST00000360439 ARMT1Q9H993 441 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 RNF181Q9P0P0 153 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 LEMD3Q9Y2U8 911 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 GOLGA8AA7E2F4 631 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 PPFIA3O75145 1194 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 CPA1P15085 419 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 LMNB1P20700 586 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 EFCAB13Q8IY85 973 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 ZNF710Q8N1W2 664 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 KIAA1524Q8TCG1 905 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 CUL5Q93034 780 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 MTRQ99707 1265 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 USP40Q9NVE5 1235 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 ORC3Q9UBD5 711 aaPredicted RBP11.11□□□□□ -0.63
SIN3A-201ENST00000360439 TPCN1Q9ULQ1 816 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 KIF5BP33176 963 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 TXLNAP40222 546 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 MSL3Q8N5Y2 521 aaKnown RBP11.11□□□□□ -0.63
SIN3A-201ENST00000360439 FAM227BQ96M60 508 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 MCM3P25205 808 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 MAPKAPK5Q8IW41 473 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 TCP10L2B9ZVM9 353 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 CCDC102BQ68D86 513 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 POTEDQ86YR6 584 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 RASEFQ8IZ41 740 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 SIGLEC1Q9BZZ2 1709 aa11.11□□□□□ -0.63
SIN3A-201ENST00000360439 SPTLC2O15270 562 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 PFKFB2O60825 505 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 ACTN2P35609 894 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 PSMC4P43686 418 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 NOP2P46087 812 aaKnown RBP11.1□□□□□ -0.63
SIN3A-201ENST00000360439 TNFAIP1Q13829 316 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 UBE4AQ14139 1066 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 ZYXQ15942 572 aaKnown RBP11.1□□□□□ -0.63
SIN3A-201ENST00000360439 KRT23Q9C075 422 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 BUB1BO60566 1050 aaPredicted RBP11.1□□□□□ -0.63
SIN3A-201ENST00000360439 SSRP1Q08945 709 aaKnown RBP11.1□□□□□ -0.63
SIN3A-201ENST00000360439 MRGBPQ9NV56 204 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 RABL2BQ9UNT1 228 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 A0A087WUV0 522 aaPredicted RBP11.1□□□□□ -0.63
SIN3A-201ENST00000360439 KRT18P05783 430 aaKnown RBP11.1□□□□□ -0.63
SIN3A-201ENST00000360439 WTAPQ15007 396 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 GNPTABQ3T906 1256 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 IFIT1BQ5T764 474 aaKnown RBP11.1□□□□□ -0.63
SIN3A-201ENST00000360439 TTLL11Q8NHH1 800 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 LRRC2Q9BYS8 371 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 SNUPNO95149 360 aaKnown RBP11.1□□□□□ -0.63
SIN3A-201ENST00000360439 TRIM21P19474 475 aaKnown RBP11.1□□□□□ -0.63
SIN3A-201ENST00000360439 CYP2C19P33261 490 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 SYKP43405 635 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 NECTIN1Q15223 517 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 CNNM3Q8NE01 707 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 TGFBRAP1Q8WUH2 860 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 TCEANC2Q96MN5 208 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 BRIP1Q9BX63 1249 aa11.1□□□□□ -0.63
SIN3A-201ENST00000360439 MKRN1Q9UHC7 482 aaKnown RBP11.1□□□□□ -0.63
SIN3A-201ENST00000360439 VIMP08670 466 aaKnown RBP11.09□□□□□ -0.63
SIN3A-201ENST00000360439 IQCEQ6IPM2 695 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 KBTBD3Q8NAB2 608 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 FBXO18Q8NFZ0 1043 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 ABTB1Q969K4 478 aaPredicted RBP11.09□□□□□ -0.63
SIN3A-201ENST00000360439 ZNF274Q96GC6 653 aaPredicted RBP11.09□□□□□ -0.63
SIN3A-201ENST00000360439 DESP17661 470 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 DEUP1Q05D60 604 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 NAA30Q147X3 362 aaPredicted RBP11.09□□□□□ -0.63
SIN3A-201ENST00000360439 SLC16A10Q8TF71 515 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 HOOK2Q96ED9 719 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 ZNF277Q9NRM2 450 aaPredicted RBP11.09□□□□□ -0.63
SIN3A-201ENST00000360439 ADCY9O60503 1353 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 KNDC1Q76NI1 1749 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 CLRN2A0PK11 232 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 OATP04181 439 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 METAP2P50579 478 aaKnown RBP eCLIP11.09□□□□□ -0.63
SIN3A-201ENST00000360439 CIAPIN1Q6FI81 312 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 CEP112Q8N8E3 955 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 STK24Q9Y6E0 443 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 SKAP2O75563 359 aaPredicted RBP11.09□□□□□ -0.63
SIN3A-201ENST00000360439 TRMT1LQ7Z2T5 733 aaKnown RBP11.09□□□□□ -0.63
SIN3A-201ENST00000360439 MON2Q7Z3U7 1717 aa11.09□□□□□ -0.63
SIN3A-201ENST00000360439 YEATS4O95619 227 aa11.08□□□□□ -0.64
SIN3A-201ENST00000360439 BMP15O95972 392 aa11.08□□□□□ -0.64
SIN3A-201ENST00000360439 NKX1-1Q15270 411 aaPredicted RBP11.08□□□□□ -0.64
SIN3A-201ENST00000360439 APBB1IPQ7Z5R6 666 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms