RNA–Protein interactions for RNA: ENST00000351986.10

NPM1-202, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-202ENST00000351986 FAAP100Q0VG06 881 aa7.78□□□□□ -1.16
NPM1-202ENST00000351986 CCDC27Q2M243 656 aa7.78□□□□□ -1.16
NPM1-202ENST00000351986 KIAA0319Q5VV43 1072 aa7.78□□□□□ -1.16
NPM1-202ENST00000351986 LIN37Q96GY3 246 aaPredicted RBP7.78□□□□□ -1.16
NPM1-202ENST00000351986 NPHS2Q9NP85 383 aa7.78□□□□□ -1.16
NPM1-202ENST00000351986 TMEM94Q12767 1356 aa7.78□□□□□ -1.16
NPM1-202ENST00000351986 NRXN3Q9Y4C0 1643 aa7.78□□□□□ -1.16
NPM1-202ENST00000351986 TECPR2O15040 1411 aa7.78□□□□□ -1.16
NPM1-202ENST00000351986 DCCP43146 1447 aa7.78□□□□□ -1.16
NPM1-202ENST00000351986 PTCH1Q13635 1447 aa7.78□□□□□ -1.16
NPM1-202ENST00000351986 METP08581 1390 aa7.77□□□□□ -1.17
NPM1-202ENST00000351986 BRD1O95696 1058 aa7.77□□□□□ -1.17
NPM1-202ENST00000351986 AP3B2Q13367 1082 aa7.77□□□□□ -1.17
NPM1-202ENST00000351986 PHLDB3Q6NSJ2 640 aa7.77□□□□□ -1.17
NPM1-202ENST00000351986 ZSWIM9Q86XI8 627 aa7.77□□□□□ -1.17
NPM1-202ENST00000351986 ATXN3LQ9H3M9 355 aa7.77□□□□□ -1.17
NPM1-202ENST00000351986 C19orf44Q9H6X5 657 aa7.77□□□□□ -1.17
NPM1-202ENST00000351986 C14orf93Q9H972 538 aaKnown RBP7.77□□□□□ -1.17
NPM1-202ENST00000351986 PCDHGC5Q9Y5F6 944 aa7.77□□□□□ -1.17
NPM1-202ENST00000351986 MYO5BQ9ULV0 1848 aa7.77□□□□□ -1.17
NPM1-202ENST00000351986 FAM135BQ49AJ0 1406 aa7.77□□□□□ -1.17
NPM1-202ENST00000351986 SYNGAP1Q96PV0 1343 aa7.77□□□□□ -1.17
NPM1-202ENST00000351986 CHD2O14647 1828 aaKnown RBP7.76□□□□□ -1.17
NPM1-202ENST00000351986 ABCC11Q96J66 1382 aa7.76□□□□□ -1.17
NPM1-202ENST00000351986 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.76□□□□□ -1.17
NPM1-202ENST00000351986 NEFMP07197 916 aa7.76□□□□□ -1.17
NPM1-202ENST00000351986 CANXP27824 592 aaKnown RBP7.76□□□□□ -1.17
NPM1-202ENST00000351986 ORC1Q13415 861 aa7.76□□□□□ -1.17
NPM1-202ENST00000351986 ANGEL2Q5VTE6 544 aaKnown RBP7.76□□□□□ -1.17
NPM1-202ENST00000351986 FYB2Q5VWT5 728 aa7.76□□□□□ -1.17
NPM1-202ENST00000351986 LCNL1Q6ZST4 164 aa7.76□□□□□ -1.17
NPM1-202ENST00000351986 TOP6BLQ8N6T0 577 aa7.76□□□□□ -1.17
NPM1-202ENST00000351986 HEXIM2Q96MH2 286 aaKnown RBP7.76□□□□□ -1.17
NPM1-202ENST00000351986 ABCB6Q9NP58 842 aa7.76□□□□□ -1.17
NPM1-202ENST00000351986 PTPRUQ92729 1446 aa7.76□□□□□ -1.17
NPM1-202ENST00000351986 ADGRF5Q8IZF2 1346 aa7.76□□□□□ -1.17
NPM1-202ENST00000351986 STRCP1A6NGW2 1772 aa7.75□□□□□ -1.17
NPM1-202ENST00000351986 PPLO60437 1756 aa7.75□□□□□ -1.17
NPM1-202ENST00000351986 TMEM265A0A087WTH1 108 aa7.75□□□□□ -1.17
NPM1-202ENST00000351986 UNCXA6NJT0 531 aa7.75□□□□□ -1.17
NPM1-202ENST00000351986 SLFN14P0C7P3 912 aa7.75□□□□□ -1.17
NPM1-202ENST00000351986 KCNMB1Q16558 191 aa7.75□□□□□ -1.17
NPM1-202ENST00000351986 RGL3Q3MIN7 710 aa7.75□□□□□ -1.17
NPM1-202ENST00000351986 SLC23A3Q6PIS1 610 aa7.75□□□□□ -1.17
NPM1-202ENST00000351986 C1QL4Q86Z23 238 aa7.75□□□□□ -1.17
NPM1-202ENST00000351986 FLAD1Q8NFF5 587 aa7.75□□□□□ -1.17
NPM1-202ENST00000351986 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
NPM1-202ENST00000351986 MSH6P52701 1360 aa7.74□□□□□ -1.17
NPM1-202ENST00000351986 DHX57Q6P158 1386 aaKnown RBP7.74□□□□□ -1.17
NPM1-202ENST00000351986 RAP1GAPP47736 663 aa7.74□□□□□ -1.17
NPM1-202ENST00000351986 SF3B2Q13435 895 aaKnown RBP7.74□□□□□ -1.17
NPM1-202ENST00000351986 KIF4BQ2VIQ3 1234 aa7.74□□□□□ -1.17
NPM1-202ENST00000351986 CWC22Q9HCG8 908 aaKnown RBP7.74□□□□□ -1.17
NPM1-202ENST00000351986 XRN1Q8IZH2 1706 aaKnown RBP7.74□□□□□ -1.17
NPM1-202ENST00000351986 CLSPNQ9HAW4 1339 aa7.74□□□□□ -1.17
NPM1-202ENST00000351986 LRPPRCP42704 1394 aaKnown RBP7.73□□□□□ -1.17
NPM1-202ENST00000351986 ISL2Q96A47 359 aa7.73□□□□□ -1.17
NPM1-202ENST00000351986 MKNK2Q9HBH9 465 aa7.73□□□□□ -1.17
NPM1-202ENST00000351986 PCOLCE2Q9UKZ9 415 aa7.73□□□□□ -1.17
NPM1-202ENST00000351986 SETD1AO15047 1707 aaKnown RBP7.72□□□□□ -1.17
NPM1-202ENST00000351986 IFT172Q9UG01 1749 aa7.72□□□□□ -1.17
NPM1-202ENST00000351986 ADGRL3Q9HAR2 1447 aa7.72□□□□□ -1.17
NPM1-202ENST00000351986 GSTP1P09211 210 aaKnown RBP7.72□□□□□ -1.17
NPM1-202ENST00000351986 ZP2Q05996 745 aa7.72□□□□□ -1.17
NPM1-202ENST00000351986 IKZF1Q13422 519 aa7.72□□□□□ -1.17
NPM1-202ENST00000351986 PRR23BQ6ZRT6 265 aa7.72□□□□□ -1.17
NPM1-202ENST00000351986 TNKS2Q9H2K2 1166 aa7.72□□□□□ -1.17
NPM1-202ENST00000351986 SSU72Q9NP77 194 aaKnown RBP7.72□□□□□ -1.17
NPM1-202ENST00000351986 CTNND2Q9UQB3 1225 aa7.72□□□□□ -1.17
NPM1-202ENST00000351986 LAMC1P11047 1609 aa7.71□□□□□ -1.17
NPM1-202ENST00000351986 ECM1Q16610 540 aa7.71□□□□□ -1.18
NPM1-202ENST00000351986 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.18
NPM1-202ENST00000351986 LCE5AQ5TCM9 118 aa7.71□□□□□ -1.18
NPM1-202ENST00000351986 LILRA6Q6PI73 481 aa7.71□□□□□ -1.18
NPM1-202ENST00000351986 SND1Q7KZF4 910 aaKnown RBP eCLIP7.71□□□□□ -1.18
NPM1-202ENST00000351986 FAM214BQ7L5A3 538 aa7.71□□□□□ -1.18
NPM1-202ENST00000351986 LRRC56Q8IYG6 542 aaPredicted RBP7.71□□□□□ -1.18
NPM1-202ENST00000351986 STK35Q8TDR2 534 aa7.71□□□□□ -1.18
NPM1-202ENST00000351986 KCNB2Q92953 911 aa7.71□□□□□ -1.18
NPM1-202ENST00000351986 ROBO2Q9HCK4 1378 aa7.71□□□□□ -1.18
NPM1-202ENST00000351986 YTHDC2Q9H6S0 1430 aaKnown RBP7.7□□□□□ -1.18
NPM1-202ENST00000351986 DLC1Q96QB1 1528 aa7.7□□□□□ -1.18
NPM1-202ENST00000351986 TMEM238LA0A1B0GVL6 79 aa7.7□□□□□ -1.18
NPM1-202ENST00000351986 ATF3P18847 181 aa7.7□□□□□ -1.18
NPM1-202ENST00000351986 SYDE1Q6ZW31 735 aaPredicted RBP7.7□□□□□ -1.18
NPM1-202ENST00000351986 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.7□□□□□ -1.18
NPM1-202ENST00000351986 TOX2Q96NM4 488 aa7.7□□□□□ -1.18
NPM1-202ENST00000351986 KCNK12Q9HB15 430 aa7.7□□□□□ -1.18
NPM1-202ENST00000351986 ADGRB1O14514 1584 aa7.7□□□□□ -1.18
NPM1-202ENST00000351986 XIRP1Q702N8 1843 aaKnown RBP7.69□□□□□ -1.18
NPM1-202ENST00000351986 RBAK-RBAKDNI3L0D1 243 aa7.69□□□□□ -1.18
NPM1-202ENST00000351986 CPNE3O75131 537 aaKnown RBP7.69□□□□□ -1.18
NPM1-202ENST00000351986 GADD45BO75293 160 aaPredicted RBP7.69□□□□□ -1.18
NPM1-202ENST00000351986 PTPN12Q05209 780 aaKnown RBP7.69□□□□□ -1.18
NPM1-202ENST00000351986 UBE3DQ7Z6J8 389 aa7.69□□□□□ -1.18
NPM1-202ENST00000351986 PDZD3Q86UT5 571 aa7.69□□□□□ -1.18
NPM1-202ENST00000351986 SPACA3Q8IXA5 215 aa7.69□□□□□ -1.18
NPM1-202ENST00000351986 BHLHE22Q8NFJ8 381 aaPredicted RBP7.69□□□□□ -1.18
NPM1-202ENST00000351986 FAM53CQ9NYF3 392 aa7.69□□□□□ -1.18
NPM1-202ENST00000351986 USTQ9Y2C2 406 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms