RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 RASA3Q14644 834 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 SLC35G1Q2M3R5 365 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 KIF4BQ2VIQ3 1234 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 KRT40Q6A162 431 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 FAM173BQ6P4H8 233 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 CDAN1Q8IWY9 1227 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 TMEM87AQ8NBN3 555 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 KANSL2Q9H9L4 492 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.74□□□□□ -0.37
ECM1-201ENST00000346569 RNF181Q9P0P0 153 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 ASTN2O75129 1339 aaPredicted RBP12.73□□□□□ -0.37
ECM1-201ENST00000346569 CNTNAP5Q8WYK1 1306 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 TRAK2O60296 914 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 PRPF40AO75400 957 aaKnown RBP12.73□□□□□ -0.37
ECM1-201ENST00000346569 DDNO94850 711 aaPredicted RBP12.73□□□□□ -0.37
ECM1-201ENST00000346569 EPS15P42566 896 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 FOSBP53539 338 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 HIRAP54198 1017 aaPredicted RBP12.73□□□□□ -0.37
ECM1-201ENST00000346569 SEPT2Q15019 361 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 ABCB5Q2M3G0 1257 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 SHROOM1Q2M3G4 852 aaPredicted RBP12.73□□□□□ -0.37
ECM1-201ENST00000346569 FOXD4L6Q3SYB3 417 aaPredicted RBP12.73□□□□□ -0.37
ECM1-201ENST00000346569 C9orf131Q5VYM1 1079 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 FOXD4L3Q6VB84 417 aaPredicted RBP12.73□□□□□ -0.37
ECM1-201ENST00000346569 TMEM179Q6ZVK1 233 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 USP48Q86UV5 1035 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 SHISA4Q96DD7 197 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 LZTS2Q9BRK4 669 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 TRIM34Q9BYJ4 488 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 HACL1Q9UJ83 578 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 CNPY2Q9Y2B0 182 aa12.73□□□□□ -0.37
ECM1-201ENST00000346569 GREB1LQ9C091 1923 aaPredicted RBP12.73□□□□□ -0.37
ECM1-201ENST00000346569 USP17L5A8MUK1 530 aa12.72□□□□□ -0.37
ECM1-201ENST00000346569 MPHOSPH10O00566 681 aaKnown RBP12.72□□□□□ -0.37
ECM1-201ENST00000346569 CYTH3O43739 400 aa12.72□□□□□ -0.37
ECM1-201ENST00000346569 PDHBP11177 359 aa12.72□□□□□ -0.37
ECM1-201ENST00000346569 EEF2P13639 858 aaKnown RBP12.72□□□□□ -0.37
ECM1-201ENST00000346569 VEGFAP15692 232 aaPredicted RBP12.72□□□□□ -0.37
ECM1-201ENST00000346569 U2AF2P26368 475 aaKnown RBP eCLIP12.72□□□□□ -0.37
ECM1-201ENST00000346569 KIF23Q02241 960 aaPredicted RBP12.72□□□□□ -0.37
ECM1-201ENST00000346569 TNFAIP1Q13829 316 aa12.72□□□□□ -0.37
ECM1-201ENST00000346569 SKOR2Q2VWA4 1001 aaPredicted RBP12.72□□□□□ -0.37
ECM1-201ENST00000346569 ATL3Q6DD88 541 aa12.72□□□□□ -0.37
ECM1-201ENST00000346569 CLEC10AQ8IUN9 316 aa12.72□□□□□ -0.37
ECM1-201ENST00000346569 TRPM4Q8TD43 1214 aa12.72□□□□□ -0.37
ECM1-201ENST00000346569 PHF20L1A8MW92 1017 aa12.71□□□□□ -0.37
ECM1-201ENST00000346569 KLRF2D3W0D1 207 aa12.71□□□□□ -0.37
ECM1-201ENST00000346569 AKAP17AQ02040 695 aaKnown RBP12.71□□□□□ -0.37
ECM1-201ENST00000346569 USP17L2Q6R6M4 530 aa12.71□□□□□ -0.37
ECM1-201ENST00000346569 SPZ1Q9BXG8 430 aa12.71□□□□□ -0.37
ECM1-201ENST00000346569 DEFB129Q9H1M3 183 aa12.71□□□□□ -0.37
ECM1-201ENST00000346569 RIOX1Q9H6W3 641 aa12.71□□□□□ -0.37
ECM1-201ENST00000346569 GDPD2Q9HCC8 539 aa12.71□□□□□ -0.37
ECM1-201ENST00000346569 CABP5Q9NP86 173 aa12.71□□□□□ -0.37
ECM1-201ENST00000346569 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.37
ECM1-201ENST00000346569 hCG_1642624A0A1W2PR95 340 aa12.71□□□□□ -0.38
ECM1-201ENST00000346569 KIF28PB7ZC32 967 aa12.71□□□□□ -0.38
ECM1-201ENST00000346569 GDF11O95390 407 aa12.71□□□□□ -0.38
ECM1-201ENST00000346569 GH2P01242 217 aa12.71□□□□□ -0.38
ECM1-201ENST00000346569 MMP1P03956 469 aa12.71□□□□□ -0.38
ECM1-201ENST00000346569 PARP1P09874 1014 aaKnown RBP12.71□□□□□ -0.38
ECM1-201ENST00000346569 CAP2P40123 477 aa12.71□□□□□ -0.38
ECM1-201ENST00000346569 KRT85P78386 507 aa12.71□□□□□ -0.38
ECM1-201ENST00000346569 PFKFB3Q16875 520 aaPredicted RBP12.71□□□□□ -0.38
ECM1-201ENST00000346569 MIGA2Q7L4E1 593 aa12.71□□□□□ -0.38
ECM1-201ENST00000346569 BRAPQ7Z569 592 aa12.71□□□□□ -0.38
ECM1-201ENST00000346569 RBM27Q9P2N5 1060 aaKnown RBP12.71□□□□□ -0.38
ECM1-201ENST00000346569 RCOR1Q9UKL0 485 aa12.71□□□□□ -0.38
ECM1-201ENST00000346569 SCAF8Q9UPN6 1271 aaKnown RBP12.71□□□□□ -0.38
ECM1-201ENST00000346569 TCHHQ07283 1943 aa12.7□□□□□ -0.38
ECM1-201ENST00000346569 GOLGA8HP0CJ92 632 aa12.7□□□□□ -0.38
ECM1-201ENST00000346569 SCG2P13521 617 aa12.7□□□□□ -0.38
ECM1-201ENST00000346569 C1QTNF8P60827 252 aa12.7□□□□□ -0.38
ECM1-201ENST00000346569 ZNF543Q08ER8 600 aa12.7□□□□□ -0.38
ECM1-201ENST00000346569 TRIM29Q14134 588 aa12.7□□□□□ -0.38
ECM1-201ENST00000346569 NPY5RQ15761 445 aa12.7□□□□□ -0.38
ECM1-201ENST00000346569 ASPRV1Q53RT3 343 aa12.7□□□□□ -0.38
ECM1-201ENST00000346569 RASGRP2Q7LDG7 609 aa12.7□□□□□ -0.38
ECM1-201ENST00000346569 LRRC47Q8N1G4 583 aaKnown RBP12.7□□□□□ -0.38
ECM1-201ENST00000346569 PHF20Q9BVI0 1012 aa12.7□□□□□ -0.38
ECM1-201ENST00000346569 SYNPO2Q9UMS6 1093 aa12.7□□□□□ -0.38
ECM1-201ENST00000346569 KCNJ14Q9UNX9 436 aa12.7□□□□□ -0.38
ECM1-201ENST00000346569 A0A1W2PRG0 241 aa12.69□□□□□ -0.38
ECM1-201ENST00000346569 BTBD18B2RXH4 712 aa12.69□□□□□ -0.38
ECM1-201ENST00000346569 GADD45BO75293 160 aaPredicted RBP12.69□□□□□ -0.38
ECM1-201ENST00000346569 ICA1Q05084 483 aa12.69□□□□□ -0.38
ECM1-201ENST00000346569 KLHL40Q2TBA0 621 aa12.69□□□□□ -0.38
ECM1-201ENST00000346569 GPATCH4Q5T3I0 446 aaKnown RBP12.69□□□□□ -0.38
ECM1-201ENST00000346569 NBPF12Q5TAG4 269 aaPredicted RBP12.69□□□□□ -0.38
ECM1-201ENST00000346569 ANGEL2Q5VTE6 544 aaKnown RBP12.69□□□□□ -0.38
ECM1-201ENST00000346569 MYSM1Q5VVJ2 828 aa12.69□□□□□ -0.38
ECM1-201ENST00000346569 DPY19L2Q6NUT2 758 aa12.69□□□□□ -0.38
ECM1-201ENST00000346569 APOBEC3FQ8IUX4 373 aaKnown RBP12.69□□□□□ -0.38
ECM1-201ENST00000346569 LEO1Q8WVC0 666 aaPredicted RBP12.69□□□□□ -0.38
ECM1-201ENST00000346569 SCAND2PQ9GZW5 306 aaPredicted RBP12.69□□□□□ -0.38
ECM1-201ENST00000346569 FOXP1Q9H334 677 aaPredicted RBP12.69□□□□□ -0.38
ECM1-201ENST00000346569 SH3GLB2Q9NR46 395 aa12.69□□□□□ -0.38
ECM1-201ENST00000346569 ADARB2Q9NS39 739 aaKnown RBP12.69□□□□□ -0.38
ECM1-201ENST00000346569 ZNF112Q9UJU3 913 aa12.69□□□□□ -0.38
ECM1-201ENST00000346569 CFAP45Q9UL16 551 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms