RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 VEZTQ9HBM0 779 aa24.83■■□□□ 1.56
TSPAN3-202ENST00000346495 HERC5Q9UII4 1024 aaKnown RBP24.83■■□□□ 1.56
TSPAN3-202ENST00000346495 WNT10BO00744 389 aa24.82■■□□□ 1.56
TSPAN3-202ENST00000346495 U2AF2P26368 475 aaKnown RBP eCLIP24.82■■□□□ 1.56
TSPAN3-202ENST00000346495 CAVIN1Q6NZI2 390 aaKnown RBP24.82■■□□□ 1.56
TSPAN3-202ENST00000346495 ARHGAP27Q6ZUM4 889 aa24.82■■□□□ 1.56
TSPAN3-202ENST00000346495 STAG2Q8N3U4 1231 aa24.82■■□□□ 1.56
TSPAN3-202ENST00000346495 CNTNAP1P78357 1384 aa24.82■■□□□ 1.56
TSPAN3-202ENST00000346495 MYH4Q9Y623 1939 aa24.81■■□□□ 1.56
TSPAN3-202ENST00000346495 FAM196BA6NMK8 535 aa24.81■■□□□ 1.56
TSPAN3-202ENST00000346495 PARP1P09874 1014 aaKnown RBP24.81■■□□□ 1.56
TSPAN3-202ENST00000346495 MYSM1Q5VVJ2 828 aa24.81■■□□□ 1.56
TSPAN3-202ENST00000346495 USP28Q96RU2 1077 aa24.81■■□□□ 1.56
TSPAN3-202ENST00000346495 CLIP2Q9UDT6 1046 aa24.81■■□□□ 1.56
TSPAN3-202ENST00000346495 MTMR7Q9Y216 660 aa24.81■■□□□ 1.56
TSPAN3-202ENST00000346495 GJA3Q9Y6H8 435 aa24.81■■□□□ 1.56
TSPAN3-202ENST00000346495 SLURP2P0DP57 97 aa24.8■■□□□ 1.56
TSPAN3-202ENST00000346495 GMPSP49915 693 aaPredicted RBP24.8■■□□□ 1.56
TSPAN3-202ENST00000346495 RCOR1Q9UKL0 485 aa24.8■■□□□ 1.56
TSPAN3-202ENST00000346495 SCG2P13521 617 aa24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 PFKFB3Q16875 520 aaPredicted RBP24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 TMEM179Q6ZVK1 233 aa24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 SYAP1Q96A49 352 aaPredicted RBP24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 FOXP1Q9H334 677 aaPredicted RBP24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 RTEL1Q9NZ71 1219 aa24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 KCNJ14Q9UNX9 436 aa24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 hCG_1642624A0A1W2PR95 340 aa24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 SHTN1A0MZ66 631 aa24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 KLRF2D3W0D1 207 aa24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 LMNB1P20700 586 aa24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 SMARCA1P28370 1054 aa24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 TNNI2P48788 182 aa24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 NBPF9Q3BBW0 867 aa24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 DIS3L2Q8IYB7 885 aaKnown RBP24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 KANSL2Q9H9L4 492 aa24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.79■■□□□ 1.56
TSPAN3-202ENST00000346495 GOLGA6L4A6NEF3 574 aa24.78■■□□□ 1.56
TSPAN3-202ENST00000346495 CEBPZQ03701 1054 aaKnown RBP24.78■■□□□ 1.56
TSPAN3-202ENST00000346495 ABCB5Q2M3G0 1257 aa24.78■■□□□ 1.56
TSPAN3-202ENST00000346495 MICALL2Q8IY33 904 aa24.78■■□□□ 1.56
TSPAN3-202ENST00000346495 LRRC47Q8N1G4 583 aaKnown RBP24.78■■□□□ 1.56
TSPAN3-202ENST00000346495 PHF20Q9BVI0 1012 aa24.78■■□□□ 1.56
TSPAN3-202ENST00000346495 SPZ1Q9BXG8 430 aa24.78■■□□□ 1.56
TSPAN3-202ENST00000346495 VPS54Q9P1Q0 977 aa24.78■■□□□ 1.56
TSPAN3-202ENST00000346495 NYAP2Q9P242 653 aa24.78■■□□□ 1.56
TSPAN3-202ENST00000346495 CNOT7Q9UIV1 285 aaKnown RBP24.78■■□□□ 1.56
TSPAN3-202ENST00000346495 ZNF541Q9H0D2 1346 aa24.77■■□□□ 1.56
TSPAN3-202ENST00000346495 PDHBP11177 359 aa24.77■■□□□ 1.56
TSPAN3-202ENST00000346495 ASPRV1Q53RT3 343 aa24.77■■□□□ 1.56
TSPAN3-202ENST00000346495 RBM26Q5T8P6 1007 aaKnown RBP24.77■■□□□ 1.56
TSPAN3-202ENST00000346495 USP17L2Q6R6M4 530 aa24.77■■□□□ 1.56
TSPAN3-202ENST00000346495 CLEC10AQ8IUN9 316 aa24.77■■□□□ 1.56
TSPAN3-202ENST00000346495 POLR3EQ9NVU0 708 aa24.77■■□□□ 1.56
TSPAN3-202ENST00000346495 SBF1O95248 1867 aa24.77■■□□□ 1.56
TSPAN3-202ENST00000346495 SNHG28P0DPA3 235 aa24.76■■□□□ 1.55
TSPAN3-202ENST00000346495 NOSTRINQ8IVI9 506 aa24.76■■□□□ 1.55
TSPAN3-202ENST00000346495 MKL1Q969V6 931 aa24.76■■□□□ 1.55
TSPAN3-202ENST00000346495 USP17L5A8MUK1 530 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 BTBD18B2RXH4 712 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 TBC1D12O60347 775 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 YEATS4O95619 227 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 GOLGA8HP0CJ92 632 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 SYT17Q9BSW7 474 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 FTOQ9C0B1 505 aaKnown RBP eCLIP24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 BRMS1Q9HCU9 246 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 CABP5Q9NP86 173 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 SH3GLB2Q9NR46 395 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 TMEM63CQ9P1W3 806 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 KRT2P35908 639 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 NASPP49321 788 aaPredicted RBP24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 ATP2B2Q01814 1243 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 TNFAIP1Q13829 316 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 SHISA4Q96DD7 197 aa24.75■■□□□ 1.55
TSPAN3-202ENST00000346495 CYTH3O43739 400 aa24.74■■□□□ 1.55
TSPAN3-202ENST00000346495 GDF11O95390 407 aa24.74■■□□□ 1.55
TSPAN3-202ENST00000346495 SEPT2Q15019 361 aa24.74■■□□□ 1.55
TSPAN3-202ENST00000346495 ZSCAN23Q3MJ62 389 aa24.74■■□□□ 1.55
TSPAN3-202ENST00000346495 ANO1Q5XXA6 986 aa24.74■■□□□ 1.55
TSPAN3-202ENST00000346495 PIBF1Q8WXW3 757 aa24.74■■□□□ 1.55
TSPAN3-202ENST00000346495 TMEM39BQ9GZU3 492 aa24.74■■□□□ 1.55
TSPAN3-202ENST00000346495 BAZ2BQ9UIF8 2168 aaKnown RBP24.73■■□□□ 1.55
TSPAN3-202ENST00000346495 EEF2P13639 858 aaKnown RBP24.73■■□□□ 1.55
TSPAN3-202ENST00000346495 ICA1Q05084 483 aa24.73■■□□□ 1.55
TSPAN3-202ENST00000346495 STK38Q15208 465 aa24.73■■□□□ 1.55
TSPAN3-202ENST00000346495 SLC35G1Q2M3R5 365 aa24.73■■□□□ 1.55
TSPAN3-202ENST00000346495 TPRNQ4KMQ1 711 aa24.73■■□□□ 1.55
TSPAN3-202ENST00000346495 RASGRP2Q7LDG7 609 aa24.73■■□□□ 1.55
TSPAN3-202ENST00000346495 FAM177A1Q8N128 213 aaPredicted RBP24.73■■□□□ 1.55
TSPAN3-202ENST00000346495 LINC00301Q8NCQ3 95 aa24.73■■□□□ 1.55
TSPAN3-202ENST00000346495 PGBD1Q96JS3 809 aa24.73■■□□□ 1.55
TSPAN3-202ENST00000346495 CLIC4Q9Y696 253 aa24.73■■□□□ 1.55
TSPAN3-202ENST00000346495 H7C1D1 291 aa24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 KIF4BQ2VIQ3 1234 aa24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 KCNG4Q8TDN1 519 aa24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 PGAP2Q9UHJ9 254 aa24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 EGFRP00533 1210 aa24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 CALML3P27482 149 aa24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 NLRP5P59047 1200 aa24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 ZNF445P59923 1031 aa24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 ZNF543Q08ER8 600 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms