RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 OATP04181 439 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 KRT13P13646 458 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 RCN2Q14257 317 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 PPP2R5EQ16537 467 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 CCT8L2Q96SF2 557 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 KRT23Q9C075 422 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 DCTPP1Q9H773 170 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 IL1RAPL2Q9NP60 686 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 WDR46O15213 610 aaKnown RBP13.91□□□□□ -0.18
BRPF3-201ENST00000339717 RTN3O95197 1032 aaPredicted RBP13.91□□□□□ -0.18
BRPF3-201ENST00000339717 DDX58O95786 925 aaKnown RBP13.91□□□□□ -0.18
BRPF3-201ENST00000339717 POLR3DP05423 398 aaPredicted RBP13.91□□□□□ -0.18
BRPF3-201ENST00000339717 ATP5JP18859 108 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 PDE6CP51160 858 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 ADKP55263 362 aaKnown RBP13.91□□□□□ -0.18
BRPF3-201ENST00000339717 TPD52P55327 224 aaPredicted RBP13.91□□□□□ -0.18
BRPF3-201ENST00000339717 OGFOD1Q8N543 542 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 WDR60Q8WVS4 1066 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 SPATA17Q96L03 361 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 KIAA1468Q9P260 1216 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 ATP6V1G1O75348 118 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 ACADSP16219 412 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 SOGA3Q5TF21 947 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 ARHGAP5Q13017 1502 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 USP27XA6NNY8 438 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 ADCY3O60266 1144 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 TSPAN9O75954 239 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 KRT9P35527 623 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 TMPOP42166 694 aaKnown RBP13.91□□□□□ -0.18
BRPF3-201ENST00000339717 CCDC15Q0P6D6 951 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 TEFQ10587 303 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 KPNB1Q14974 876 aaKnown RBP13.91□□□□□ -0.18
BRPF3-201ENST00000339717 TMTC2Q8N394 836 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 FAM192AQ9GZU8 254 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 ATXN10Q9UBB4 475 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 TSPYL4Q9UJ04 414 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 C15orf41Q9Y2V0 281 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 ABCA10Q8WWZ4 1543 aa13.91□□□□□ -0.18
BRPF3-201ENST00000339717 IKBKBO14920 756 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 EIF3BP55884 814 aaKnown RBP13.9□□□□□ -0.18
BRPF3-201ENST00000339717 NUGGCQ68CJ6 796 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 POTEEQ6S8J3 1075 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 KIRREL3Q8IZU9 778 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 DRAXINQ8NBI3 349 aaPredicted RBP13.9□□□□□ -0.18
BRPF3-201ENST00000339717 DDX23Q9BUQ8 820 aaKnown RBP13.9□□□□□ -0.18
BRPF3-201ENST00000339717 SPG7Q9UQ90 795 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 BZW2Q9Y6E2 419 aaKnown RBP13.9□□□□□ -0.18
BRPF3-201ENST00000339717 SNAPC4Q5SXM2 1469 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 KIAA0586Q9BVV6 1533 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 BMP15O95972 392 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 SMCR8Q8TEV9 937 aaPredicted RBP13.9□□□□□ -0.18
BRPF3-201ENST00000339717 NUDCD1Q96RS6 583 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 ANKRD2Q9GZV1 360 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 RNF14Q9UBS8 474 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 R3HDM2Q9Y2K5 976 aaKnown RBP13.9□□□□□ -0.18
BRPF3-201ENST00000339717 GOLGA8AA7E2F4 631 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 GOLGA8BA8MQT2 603 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 COQ7Q99807 217 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 HAUS8Q9BT25 410 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 PFKFB2O60825 505 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 LMNB1P20700 586 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 SF3A3Q12874 501 aaKnown RBP eCLIP13.9□□□□□ -0.183e-7■■■■□ 23.5
BRPF3-201ENST00000339717 CUL4AQ13619 759 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 THEMIS2Q5TEJ8 643 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 LONP2Q86WA8 852 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 EVI5LQ96CN4 794 aa13.9□□□□□ -0.18
BRPF3-201ENST00000339717 TROQ12816 1431 aaPredicted RBP13.9□□□□□ -0.19
BRPF3-201ENST00000339717 IRF6O14896 467 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 TBL3Q12788 808 aaKnown RBP13.89□□□□□ -0.19
BRPF3-201ENST00000339717 FNBP4Q8N3X1 1017 aaPredicted RBP13.89□□□□□ -0.19
BRPF3-201ENST00000339717 TRIML2Q8N7C3 387 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 NAF1Q96HR8 494 aaKnown RBP13.89□□□□□ -0.19
BRPF3-201ENST00000339717 TMCO1Q9UM00 188 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 A0A1B0GVL5 298 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 CCDC159P0C7I6 412 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 ANKRD44Q8N8A2 993 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 SH3GL2Q99962 352 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 PRELID1Q9Y255 219 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 NFE2L3Q9Y4A8 694 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 PSMA7O14818 248 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 TRIM37O94972 964 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 FAM107AO95990 144 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 MSH2P43246 934 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 PPP4R3AQ6IN85 833 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 SCYL3Q8IZE3 742 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 NR1I2O75469 434 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 TRAPPC9Q96Q05 1148 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 ECT2Q9H8V3 914 aa13.89□□□□□ -0.19
BRPF3-201ENST00000339717 EIF4E1BA6NMX2 242 aaKnown RBP13.88□□□□□ -0.19
BRPF3-201ENST00000339717 ARHGEF9O43307 516 aa13.88□□□□□ -0.19
BRPF3-201ENST00000339717 MSL3P1P0C860 447 aa13.88□□□□□ -0.19
BRPF3-201ENST00000339717 ANKRD20A4Q4UJ75 823 aa13.88□□□□□ -0.19
BRPF3-201ENST00000339717 ANKRD20A8PQ5CZ79 823 aa13.88□□□□□ -0.19
BRPF3-201ENST00000339717 ANKRD20A2Q5SQ80 823 aa13.88□□□□□ -0.19
BRPF3-201ENST00000339717 ANKRD20A1Q5TYW2 823 aa13.88□□□□□ -0.19
BRPF3-201ENST00000339717 BBOF1Q8ND07 529 aa13.88□□□□□ -0.19
BRPF3-201ENST00000339717 FERMT1Q9BQL6 677 aa13.88□□□□□ -0.19
BRPF3-201ENST00000339717 NVLO15381 856 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms