RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 CEP112Q8N8E3 955 aa9.99□□□□□ -0.81
CD28-201ENST00000324106 RAB3IL1Q8TBN0 382 aa9.99□□□□□ -0.81
CD28-201ENST00000324106 ATP6V0A1Q93050 837 aa9.99□□□□□ -0.81
CD28-201ENST00000324106 NAP1L3Q99457 506 aaPredicted RBP9.99□□□□□ -0.81
CD28-201ENST00000324106 KCNH3Q9ULD8 1083 aa9.99□□□□□ -0.81
CD28-201ENST00000324106 CD19P15391 556 aa9.99□□□□□ -0.81
CD28-201ENST00000324106 HOXD10P28358 340 aa9.99□□□□□ -0.81
CD28-201ENST00000324106 EP400NLQ6ZTU2 488 aa9.99□□□□□ -0.81
CD28-201ENST00000324106 NOC4LQ9BVI4 516 aaKnown RBP9.99□□□□□ -0.81
CD28-201ENST00000324106 TRMT1Q9NXH9 659 aaKnown RBP9.99□□□□□ -0.81
CD28-201ENST00000324106 ASNSP08243 561 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 BCRP11274 1271 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 PODNQ7Z5L7 613 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 RNF169Q8NCN4 708 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 ODR4Q5SWX8 454 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 KRT40Q6A162 431 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 FAM160B2Q86V87 743 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 SLC17A8Q8NDX2 589 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 TTLL1O95922 423 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 SYT1P21579 422 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 STX17P56962 302 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 INF2Q27J81 1249 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 SPECC1LQ69YQ0 1117 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 TPH2Q8IWU9 490 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 IPO4Q8TEX9 1081 aaKnown RBP9.98□□□□□ -0.81
CD28-201ENST00000324106 RPS6KC1Q96S38 1066 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 BCCIPQ9P287 314 aaKnown RBP eCLIP9.98□□□□□ -0.81
CD28-201ENST00000324106 PCDHA1Q9Y5I3 950 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 A0A1W2PRG0 241 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 E7EWF7 191 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 ABCD1P33897 745 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 CCDC84Q86UT8 332 aaPredicted RBP9.98□□□□□ -0.81
CD28-201ENST00000324106 CABP7Q86V35 215 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 MLKLQ8NB16 471 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 RETREG2Q8NC44 543 aa9.98□□□□□ -0.81
CD28-201ENST00000324106 hCG_1984214I3L0E3 225 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 TNKSO95271 1327 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 KRT19P08727 400 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 PTGS1P23219 599 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 CSGALNACT2Q8N6G5 542 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 ZNF713Q8N859 430 aaPredicted RBP9.97□□□□□ -0.81
CD28-201ENST00000324106 ZNF274Q96GC6 653 aaPredicted RBP9.97□□□□□ -0.81
CD28-201ENST00000324106 FAM204AQ9H8W3 233 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 MRPL44Q9H9J2 332 aaKnown RBP9.97□□□□□ -0.81
CD28-201ENST00000324106 PCDHA12Q9UN75 941 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 TNNQ9UQP3 1299 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.97□□□□□ -0.81
CD28-201ENST00000324106 SEL1L2Q5TEA6 688 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 MAATS1Q7Z4T9 603 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 PLA2G4DQ86XP0 818 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 BLIDQ8IZY5 108 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 FANCBQ8NB91 859 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 LEO1Q8WVC0 666 aaPredicted RBP9.97□□□□□ -0.81
CD28-201ENST00000324106 IQCDQ96DY2 449 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 CCDC114Q96M63 670 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 ZNF830Q96NB3 372 aaPredicted RBP9.97□□□□□ -0.81
CD28-201ENST00000324106 NUP58Q9BVL2 599 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 BSDC1Q9NW68 430 aaPredicted RBP9.97□□□□□ -0.81
CD28-201ENST00000324106 MTRF1LQ9UGC7 380 aaKnown RBP9.97□□□□□ -0.81
CD28-201ENST00000324106 PLEKHG2Q9H7P9 1386 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 CTAGE15A4D2H0 777 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 GCNT3O95395 438 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 CTAGE8P0CG41 777 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 PHKA1P46020 1223 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 TXNRD1Q16881 649 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 XKR9Q5GH70 373 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 CTAGE6Q86UF2 777 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 CTAGE4Q8IX94 777 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 TSGA10Q9BZW7 698 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 FBXO40Q9UH90 709 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 ZNF142P52746 1687 aaPredicted RBP9.97□□□□□ -0.81
CD28-201ENST00000324106 NCAPD2Q15021 1401 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 ABCC4O15439 1325 aa9.97□□□□□ -0.81
CD28-201ENST00000324106 GNA14O95837 355 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 TNNC2P02585 160 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 LRRC47Q8N1G4 583 aaKnown RBP9.96□□□□□ -0.81
CD28-201ENST00000324106 EAF2Q96CJ1 260 aaPredicted RBP9.96□□□□□ -0.81
CD28-201ENST00000324106 AGTPBP1Q9UPW5 1226 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 SPOPO43791 374 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 C21orf2O43822 256 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 TNNI1P19237 187 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 CALCOCO2Q13137 446 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 LRRC24Q50LG9 513 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 NEK8Q86SG6 692 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 APOBEC3FQ8IUX4 373 aaKnown RBP9.96□□□□□ -0.81
CD28-201ENST00000324106 DNAJC25Q9H1X3 360 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 LRFN2Q9ULH4 789 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 SNX14Q9Y5W7 946 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 TNS3Q68CZ2 1445 aa9.96□□□□□ -0.81
CD28-201ENST00000324106 LIG4P49917 911 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 TYRO3Q06418 890 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 MICALCLQ6ZW33 695 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 MAEAQ7L5Y9 396 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 SKAP1Q86WV1 359 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 NUCKS1Q9H1E3 243 aaKnown RBP9.96□□□□□ -0.82
CD28-201ENST00000324106 RNF181Q9P0P0 153 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 ZNF215Q9UL58 517 aaPredicted RBP9.96□□□□□ -0.82
CD28-201ENST00000324106 AGLP35573 1532 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 N4BP1O75113 896 aaKnown RBP9.96□□□□□ -0.82
CD28-201ENST00000324106 ZBTB7AO95365 584 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms