RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 TIAM2Q8IVF5 1701 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 MYH3P11055 1940 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 IL1R1P14778 569 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 ZAP70P43403 619 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 MTX1Q13505 466 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 NAIF1Q69YI7 327 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-201ENST00000318023 WWC2Q6AWC2 1192 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 CLASRPQ8N2M8 674 aaKnown RBP10.72□□□□□ -0.69
CAPN3-201ENST00000318023 AGBL3Q8NEM8 1001 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 GMLQ99445 158 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 JPH2Q9BR39 696 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-201ENST00000318023 VPS33BQ9H267 617 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 IL25Q9H293 177 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 HMG20BQ9P0W2 317 aa10.72□□□□□ -0.69
CAPN3-201ENST00000318023 UBE2Q2LH0YL09 131 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 ATP8B1O43520 1251 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 MCAMP43121 646 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 CRKP46108 304 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 APLP1P51693 650 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 LONRF2Q1L5Z9 754 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 CST9Q5W186 159 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 KCNV1Q6PIU1 500 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 CDC37L1Q7L3B6 337 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 ZSCAN29Q8IWY8 852 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-201ENST00000318023 PRPF38AQ8NAV1 312 aaKnown RBP10.71□□□□□ -0.69
CAPN3-201ENST00000318023 PARD6BQ9BYG5 372 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 ZSWIM4Q9H7M6 989 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 NEBLO76041 1014 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 LDHBP07195 334 aaKnown RBP10.71□□□□□ -0.69
CAPN3-201ENST00000318023 AK2P54819 239 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 CPLX2Q6PUV4 134 aaKnown RBP10.71□□□□□ -0.69
CAPN3-201ENST00000318023 MIGA2Q7L4E1 593 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 MIGA1Q8NAN2 632 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 MRFAP1L1Q96HT8 127 aa10.71□□□□□ -0.69
CAPN3-201ENST00000318023 IRS2Q9Y4H2 1338 aa10.71□□□□□ -0.7
CAPN3-201ENST00000318023 BECN2A8MW95 431 aa10.71□□□□□ -0.7
CAPN3-201ENST00000318023 EFCAB8A8MWE9 144 aa10.71□□□□□ -0.7
CAPN3-201ENST00000318023 ERLIN2O94905 339 aa10.71□□□□□ -0.7
CAPN3-201ENST00000318023 CPP00450 1065 aa10.71□□□□□ -0.7
CAPN3-201ENST00000318023 HNRNPH1P31943 449 aaKnown RBP10.71□□□□□ -0.7
CAPN3-201ENST00000318023 HUNKP57058 714 aa10.71□□□□□ -0.7
CAPN3-201ENST00000318023 TMEM39BQ9GZU3 492 aa10.71□□□□□ -0.7
CAPN3-201ENST00000318023 TPM1P09493 284 aa10.7□□□□□ -0.7
CAPN3-201ENST00000318023 RPS12P25398 132 aaKnown RBP10.7□□□□□ -0.7
CAPN3-201ENST00000318023 RUFY3Q7L099 469 aa10.7□□□□□ -0.7
CAPN3-201ENST00000318023 RPAP2Q8IXW5 612 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-201ENST00000318023 STK11IPQ8N1F8 1099 aa10.7□□□□□ -0.7
CAPN3-201ENST00000318023 SPATA5Q8NB90 893 aa10.7□□□□□ -0.7
CAPN3-201ENST00000318023 BICD2Q8TD16 824 aa10.7□□□□□ -0.7
CAPN3-201ENST00000318023 DEFB129Q9H1M3 183 aa10.7□□□□□ -0.7
CAPN3-201ENST00000318023 SUGCTQ9HAC7 445 aa10.7□□□□□ -0.7
CAPN3-201ENST00000318023 MYO1BO43795 1136 aa10.7□□□□□ -0.7
CAPN3-201ENST00000318023 PAX7P23759 505 aa10.7□□□□□ -0.7
CAPN3-201ENST00000318023 PDE1AP54750 535 aa10.7□□□□□ -0.7
CAPN3-201ENST00000318023 ETF1P62495 437 aaKnown RBP10.7□□□□□ -0.7
CAPN3-201ENST00000318023 IQCB1Q15051 598 aa10.7□□□□□ -0.7
CAPN3-201ENST00000318023 RASA3Q14644 834 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 TEKT1Q969V4 418 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 TMEM88BA6NKF7 163 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 FAM196BA6NMK8 535 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 AOC2O75106 756 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 KRT85P78386 507 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 APOBRQ0VD83 1088 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 FSTL1Q12841 308 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 NFIAQ12857 509 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 NBPF12Q5TAG4 269 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-201ENST00000318023 CNNM3Q8NE01 707 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 GIMAP7Q8NHV1 300 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 ERCC4Q92889 916 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-201ENST00000318023 CDCA5Q96FF9 252 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 ZIC5Q96T25 663 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 CLSTN2Q9H4D0 955 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 LTBP1Q14766 1721 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 A0A087WUV0 522 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-201ENST00000318023 ANAPC15P60006 121 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 ARMCX5Q6P1M9 558 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 GBP6Q6ZN66 633 aa10.69□□□□□ -0.7
CAPN3-201ENST00000318023 SPDYE2BA6NHP3 402 aa10.68□□□□□ -0.7
CAPN3-201ENST00000318023 SPDYE6P0CI01 402 aa10.68□□□□□ -0.7
CAPN3-201ENST00000318023 LRRFIP1Q32MZ4 808 aaKnown RBP10.68□□□□□ -0.7
CAPN3-201ENST00000318023 LRRCC1Q9C099 1032 aa10.68□□□□□ -0.7
CAPN3-201ENST00000318023 RABEP2Q9H5N1 569 aa10.68□□□□□ -0.7
CAPN3-201ENST00000318023 AATFQ9NY61 560 aaKnown RBP eCLIP10.68□□□□□ -0.7
CAPN3-201ENST00000318023 DENND2AQ9ULE3 1009 aa10.68□□□□□ -0.7
CAPN3-201ENST00000318023 ANGEL1Q9UNK9 670 aaKnown RBP10.68□□□□□ -0.7
CAPN3-201ENST00000318023 COL1A1P02452 1464 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-201ENST00000318023 TMC6Q7Z403 805 aa10.68□□□□□ -0.7
CAPN3-201ENST00000318023 WDR66Q8TBY9 1149 aa10.68□□□□□ -0.7
CAPN3-201ENST00000318023 CCDC102AQ96A19 550 aa10.68□□□□□ -0.7
CAPN3-201ENST00000318023 CLIC6Q96NY7 704 aa10.68□□□□□ -0.7
CAPN3-201ENST00000318023 PIH1D3Q9NQM4 214 aaKnown RBP10.68□□□□□ -0.7
CAPN3-201ENST00000318023 USP40Q9NVE5 1235 aa10.68□□□□□ -0.7
CAPN3-201ENST00000318023 TULP1O00294 542 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-201ENST00000318023 CHMLP26374 656 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 ZNF280AP59817 542 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-201ENST00000318023 MECOMQ03112 1051 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 SARM1Q6SZW1 724 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 NBPF11Q86T75 865 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 ZFPM1Q8IX07 1006 aa10.67□□□□□ -0.7
CAPN3-201ENST00000318023 GPR161Q8N6U8 529 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms