RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 PNMA1Q8ND90 353 aa15.33■□□□□ 0.04
SPAST-201ENST00000315285 SAR1BQ9Y6B6 198 aa15.33■□□□□ 0.04
SPAST-201ENST00000315285 CLTCL1P53675 1640 aa15.33■□□□□ 0.04
SPAST-201ENST00000315285 PSDA5PKW4 1024 aaPredicted RBP15.33■□□□□ 0.04
SPAST-201ENST00000315285 DPCR1Q3MIW9 517 aa15.33■□□□□ 0.04
SPAST-201ENST00000315285 CCDC114Q96M63 670 aa15.33■□□□□ 0.04
SPAST-201ENST00000315285 FTOQ9C0B1 505 aaKnown RBP eCLIP15.33■□□□□ 0.04
SPAST-201ENST00000315285 CEP83Q9Y592 693 aa15.33■□□□□ 0.04
SPAST-201ENST00000315285 SFMBT2Q5VUG0 894 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 C2CD5Q86YS7 1000 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 ARHGEF10LQ9HCE6 1279 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.32■□□□□ 0.04
SPAST-201ENST00000315285 ABCC3O15438 1527 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 DCAF8L1A6NGE4 600 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 NDUFAB1O14561 156 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 PPP6R2O75170 966 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 INF2Q27J81 1249 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 RBM26Q5T8P6 1007 aaKnown RBP15.32■□□□□ 0.04
SPAST-201ENST00000315285 TBC1D22AQ8WUA7 517 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 UIMC1Q96RL1 719 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 RASSF4Q9H2L5 321 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 SAMD15Q9P1V8 674 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 BIN2Q9UBW5 565 aaPredicted RBP15.32■□□□□ 0.04
SPAST-201ENST00000315285 STK24Q9Y6E0 443 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 ARHGEF35A5YM69 484 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 GTPBP6O43824 516 aaPredicted RBP15.32■□□□□ 0.04
SPAST-201ENST00000315285 CEP104O60308 925 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 CHRNDQ07001 517 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 BRD3Q15059 726 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 WHAMMP3Q1A5X7 153 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 NUCKS1Q9H1E3 243 aaKnown RBP15.32■□□□□ 0.04
SPAST-201ENST00000315285 KCNK9Q9NPC2 374 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 NLRC4Q9NPP4 1024 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 TSKSQ9UJT2 592 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 GTF2A1P52655 376 aaPredicted RBP15.32■□□□□ 0.04
SPAST-201ENST00000315285 CFAP221Q4G0U5 840 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 RPGRIP1Q96KN7 1286 aa15.32■□□□□ 0.04
SPAST-201ENST00000315285 ACTN4O43707 911 aaKnown RBP15.31■□□□□ 0.04
SPAST-201ENST00000315285 DDAH1O94760 285 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 PTGDRQ13258 359 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 EFCAB8A8MWE9 144 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 FLOT1O75955 427 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 KRT5P13647 590 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 DNM2P50570 870 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 BIRC3Q13489 604 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 LINC00301Q8NCQ3 95 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 SYMPKQ92797 1274 aaKnown RBP15.31■□□□□ 0.04
SPAST-201ENST00000315285 KIFAP3Q92845 792 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 LRRC45Q96CN5 670 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 NT5C3AQ9H0P0 336 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 H7C1D1 291 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 SND1Q7KZF4 910 aaKnown RBP eCLIP15.31■□□□□ 0.04
SPAST-201ENST00000315285 KIAA1524Q8TCG1 905 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 CACTINQ8WUQ7 758 aaKnown RBP15.31■□□□□ 0.04
SPAST-201ENST00000315285 TSNARE1Q96NA8 513 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.31■□□□□ 0.04
SPAST-201ENST00000315285 SMTNP53814 917 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 PAK2Q13177 524 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 FAM98CQ17RN3 349 aaKnown RBP15.31■□□□□ 0.04
SPAST-201ENST00000315285 LMTK3Q96Q04 1460 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 STX10O60499 249 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 KIF23Q02241 960 aaPredicted RBP15.31■□□□□ 0.04
SPAST-201ENST00000315285 KLHL7Q8IXQ5 586 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 FNBP1Q96RU3 617 aa15.31■□□□□ 0.04
SPAST-201ENST00000315285 UTP11Q9Y3A2 253 aaKnown RBP15.31■□□□□ 0.04
SPAST-201ENST00000315285 ERBB3P21860 1342 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 CCDC169A6NNP5 214 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 B4DLN1 442 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 DPP8Q6V1X1 898 aaPredicted RBP15.3■□□□□ 0.04
SPAST-201ENST00000315285 JDP2Q8WYK2 163 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 OSBP2Q969R2 916 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 FOXP1Q9H334 677 aaPredicted RBP15.3■□□□□ 0.04
SPAST-201ENST00000315285 ATG3Q9NT62 314 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 ZBTB16Q05516 673 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 RPS6KA1Q15418 735 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 WDR44Q5JSH3 913 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 B4GALNT4Q76KP1 1039 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 GPKOWQ92917 476 aaPredicted RBP eCLIP15.3■□□□□ 0.04
SPAST-201ENST00000315285 A0A087WWV3 80 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 A6NNZ2 444 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 IKBKBO14920 756 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 RESTQ13127 1097 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 TUBB8Q3ZCM7 444 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 DPH6Q7L8W6 267 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 ASAP1Q9ULH1 1129 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 GCNT3O95395 438 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 MYCNP04198 464 aaPredicted RBP15.3■□□□□ 0.04
SPAST-201ENST00000315285 OR52Z1P0C646 297 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 PCP11498 1178 aaKnown RBP15.3■□□□□ 0.04
SPAST-201ENST00000315285 TECP42680 631 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 CCDC6Q16204 474 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 USH1GQ495M9 461 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 MFSD14BQ5SR56 506 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 CEP57Q86XR8 500 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 UBL4BQ8N7F7 174 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 TMEM87AQ8NBN3 555 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 MSANTD4Q8NCY6 345 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 TRIM31Q9BZY9 425 aa15.3■□□□□ 0.04
SPAST-201ENST00000315285 KLRF2D3W0D1 207 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 ADD2P35612 726 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms