RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 RANBP2P49792 3224 aaKnown RBP15.39■□□□□ 0.05
CD44-203ENST00000278386 SZT2Q5T011 3432 aa15.38■□□□□ 0.05
CD44-203ENST00000278386 ICA1Q05084 483 aa15.38■□□□□ 0.05
CD44-203ENST00000278386 C20orf194Q5TEA3 1177 aa15.38■□□□□ 0.05
CD44-203ENST00000278386 MFSD14CQ5VZR4 134 aa15.38■□□□□ 0.05
CD44-203ENST00000278386 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
CD44-203ENST00000278386 LBX2Q6XYB7 198 aa15.38■□□□□ 0.05
CD44-203ENST00000278386 CLEC10AQ8IUN9 316 aa15.38■□□□□ 0.05
CD44-203ENST00000278386 SH2D4AQ9H788 454 aa15.38■□□□□ 0.05
CD44-203ENST00000278386 ZNFX1Q9P2E3 1918 aaKnown RBP15.38■□□□□ 0.05
CD44-203ENST00000278386 MYH4Q9Y623 1939 aa15.38■□□□□ 0.05
CD44-203ENST00000278386 PLXNA1Q9UIW2 1896 aa15.37■□□□□ 0.05
CD44-203ENST00000278386 A0A1W2PRG0 241 aa15.37■□□□□ 0.05
CD44-203ENST00000278386 SLC15A5A6NIM6 579 aa15.37■□□□□ 0.05
CD44-203ENST00000278386 SMARCA5O60264 1052 aaPredicted RBP15.37■□□□□ 0.05
CD44-203ENST00000278386 PTPREP23469 700 aa15.37■□□□□ 0.05
CD44-203ENST00000278386 GRB14Q14449 540 aa15.37■□□□□ 0.05
CD44-203ENST00000278386 PRO3102Q9H379 93 aa15.37■□□□□ 0.05
CD44-203ENST00000278386 ATP8A2Q9NTI2 1148 aa15.37■□□□□ 0.05
CD44-203ENST00000278386 STAP2Q9UGK3 403 aa15.37■□□□□ 0.05
CD44-203ENST00000278386 GREB1LQ9C091 1923 aaPredicted RBP15.37■□□□□ 0.05
CD44-203ENST00000278386 CYP2D7A0A087X1C5 515 aa15.36■□□□□ 0.05
CD44-203ENST00000278386 A0A1W2PPC1 479 aa15.36■□□□□ 0.05
CD44-203ENST00000278386 CHGBP05060 677 aa15.36■□□□□ 0.05
CD44-203ENST00000278386 AKR1B1P15121 316 aa15.36■□□□□ 0.05
CD44-203ENST00000278386 SYN1P17600 705 aa15.36■□□□□ 0.05
CD44-203ENST00000278386 MNX1P50219 401 aaPredicted RBP15.36■□□□□ 0.05
CD44-203ENST00000278386 ATP2B2Q01814 1243 aa15.36■□□□□ 0.05
CD44-203ENST00000278386 PLS1Q14651 629 aa15.36■□□□□ 0.05
CD44-203ENST00000278386 ZSCAN25Q6NSZ9 544 aa15.36■□□□□ 0.05
CD44-203ENST00000278386 SLC4A4Q9Y6R1 1079 aa15.36■□□□□ 0.05
CD44-203ENST00000278386 PFASO15067 1338 aa15.36■□□□□ 0.05
CD44-203ENST00000278386 FLOT1O75955 427 aa15.35■□□□□ 0.05
CD44-203ENST00000278386 CNGA1P29973 690 aa15.35■□□□□ 0.05
CD44-203ENST00000278386 COG2Q14746 738 aa15.35■□□□□ 0.05
CD44-203ENST00000278386 UBE3CQ15386 1083 aa15.35■□□□□ 0.05
CD44-203ENST00000278386 SPICE1Q8N0Z3 855 aa15.35■□□□□ 0.05
CD44-203ENST00000278386 GPATCH3Q96I76 525 aa15.35■□□□□ 0.05
CD44-203ENST00000278386 MOV10L1Q9BXT6 1211 aaKnown RBP15.35■□□□□ 0.05
CD44-203ENST00000278386 HOXC10Q9NYD6 342 aa15.35■□□□□ 0.05
CD44-203ENST00000278386 FLRT1Q9NZU1 646 aa15.35■□□□□ 0.05
CD44-203ENST00000278386 USP17L12C9JPN9 530 aa15.34■□□□□ 0.05
CD44-203ENST00000278386 USP17L21D6R901 530 aa15.34■□□□□ 0.05
CD44-203ENST00000278386 RAD21O60216 631 aa15.34■□□□□ 0.05
CD44-203ENST00000278386 CDK8P49336 464 aa15.34■□□□□ 0.05
CD44-203ENST00000278386 KIAA1755Q5JYT7 1200 aa15.34■□□□□ 0.05
CD44-203ENST00000278386 C12orf60Q5U649 245 aa15.34■□□□□ 0.05
CD44-203ENST00000278386 C16orf86Q6ZW13 317 aa15.34■□□□□ 0.05
CD44-203ENST00000278386 DPP9Q86TI2 863 aa15.34■□□□□ 0.05
CD44-203ENST00000278386 NPLOC4Q8TAT6 608 aa15.34■□□□□ 0.05
CD44-203ENST00000278386 LPAR1Q92633 364 aa15.34■□□□□ 0.05
CD44-203ENST00000278386 CCDC17Q96LX7 622 aa15.34■□□□□ 0.05
CD44-203ENST00000278386 SPATC1LQ9H0A9 340 aa15.34■□□□□ 0.05
CD44-203ENST00000278386 SMIM22K7EJ46 135 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 WDR46O15213 610 aaKnown RBP15.33■□□□□ 0.04
CD44-203ENST00000278386 HOXC6P09630 235 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 ERCC3P19447 782 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 ADORA2AP29274 412 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 DSG3P32926 999 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 CYP2C19P33261 490 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 LHX8Q68G74 356 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 NCAPG2Q86XI2 1143 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 MB21D1Q8N884 522 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 ATG4CQ96DT6 458 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 PUS7LQ9H0K6 701 aaKnown RBP15.33■□□□□ 0.04
CD44-203ENST00000278386 VCPKMTQ9H867 229 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 ECHDC1Q9NTX5 307 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 ARPP21Q9UBL0 812 aaPredicted RBP15.33■□□□□ 0.04
CD44-203ENST00000278386 DDX20Q9UHI6 824 aaKnown RBP15.33■□□□□ 0.04
CD44-203ENST00000278386 TMX2Q9Y320 296 aa15.33■□□□□ 0.04
CD44-203ENST00000278386 MSCO60682 206 aa15.32■□□□□ 0.04
CD44-203ENST00000278386 MAGEA10P43363 369 aaPredicted RBP15.32■□□□□ 0.04
CD44-203ENST00000278386 SHCBP1Q8NEM2 672 aa15.32■□□□□ 0.04
CD44-203ENST00000278386 GDF15Q99988 308 aa15.32■□□□□ 0.04
CD44-203ENST00000278386 SOX1O00570 391 aaPredicted RBP15.31■□□□□ 0.04
CD44-203ENST00000278386 COL6A1P12109 1028 aa15.31■□□□□ 0.04
CD44-203ENST00000278386 LRRC26Q2I0M4 334 aa15.31■□□□□ 0.04
CD44-203ENST00000278386 TSHZ3Q63HK5 1081 aa15.31■□□□□ 0.04
CD44-203ENST00000278386 CTR9Q6PD62 1173 aa15.31■□□□□ 0.04
CD44-203ENST00000278386 STK11IPQ8N1F8 1099 aa15.31■□□□□ 0.04
CD44-203ENST00000278386 LRCH3Q96II8 777 aa15.31■□□□□ 0.04
CD44-203ENST00000278386 GOPCQ9HD26 462 aa15.31■□□□□ 0.04
CD44-203ENST00000278386 SLC5A4Q9NY91 659 aa15.31■□□□□ 0.04
CD44-203ENST00000278386 LAMA3Q16787 3333 aa15.31■□□□□ 0.04
CD44-203ENST00000278386 STRNO43815 780 aa15.3■□□□□ 0.04
CD44-203ENST00000278386 CYBAP13498 195 aa15.3■□□□□ 0.04
CD44-203ENST00000278386 EEF2P13639 858 aaKnown RBP15.3■□□□□ 0.04
CD44-203ENST00000278386 LTBP2Q14767 1821 aa15.3■□□□□ 0.04
CD44-203ENST00000278386 OLFML2BQ68BL8 750 aa15.3■□□□□ 0.04
CD44-203ENST00000278386 KBTBD3Q8NAB2 608 aa15.3■□□□□ 0.04
CD44-203ENST00000278386 SENP6Q9GZR1 1112 aaPredicted RBP15.3■□□□□ 0.04
CD44-203ENST00000278386 MROH8Q9H579 483 aa15.3■□□□□ 0.04
CD44-203ENST00000278386 KANSL2Q9H9L4 492 aa15.3■□□□□ 0.04
CD44-203ENST00000278386 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
CD44-203ENST00000278386 BMP8BP34820 402 aa15.29■□□□□ 0.04
CD44-203ENST00000278386 ANO1Q5XXA6 986 aa15.29■□□□□ 0.04
CD44-203ENST00000278386 SIAH1Q8IUQ4 282 aa15.29■□□□□ 0.04
CD44-203ENST00000278386 TRPV1Q8NER1 839 aa15.29■□□□□ 0.04
CD44-203ENST00000278386 ROBO3Q96MS0 1386 aa15.28■□□□□ 0.04
CD44-203ENST00000278386 MINDY4BA8MYZ0 360 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms