RNA–Protein interactions for RNA: ENST00000269051.8

RHBDL3-201, Transcript of rhomboid like 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RHBDL3, Length 4,661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-201ENST00000269051 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 RNF26Q9BY78 433 aaPredicted RBP13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 PUS3Q9BZE2 481 aaKnown RBP13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 ANKRD2Q9GZV1 360 aa13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 FAN1Q9Y2M0 1017 aa13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 CCNT1O60563 726 aaKnown RBP13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 MMP1P03956 469 aa13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 TYW1BQ6NUM6 668 aa13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 CC2D1AQ6P1N0 951 aaPredicted RBP13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 CCDC50Q8IVM0 306 aa13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 CABS1Q96KC9 395 aa13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 PSMB7Q99436 277 aa13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 RABEP2Q9H5N1 569 aa13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 SAMSN1Q9NSI8 373 aaKnown RBP13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 SH2B2O14492 632 aaPredicted RBP13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 RPN1P04843 607 aaKnown RBP13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 CTSWP56202 376 aa13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 HOOK3Q86VS8 718 aa13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 ZSCAN10Q96SZ4 725 aaPredicted RBP13.55□□□□□ -0.24
RHBDL3-201ENST00000269051 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 ADORA1P30542 326 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 NRXN1Q9ULB1 1477 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 SOWAHDA6NJG2 315 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 PTGDRQ13258 359 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 UBE4AQ14139 1066 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 ASIC2Q16515 512 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 PTPN21Q16825 1174 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 RESP18Q5W5W9 173 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 LZTS2Q9BRK4 669 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 TMOD2Q9NZR1 351 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 LRWD1Q9UFC0 647 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 SRPRBQ9Y5M8 271 aaKnown RBP13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 CETN3O15182 167 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 LDHBP07195 334 aaKnown RBP13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 LONP1P36776 959 aaKnown RBP13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 LIFRP42702 1097 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 TRAF1Q13077 416 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 RRAGAQ7L523 313 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 RGS22Q8NE09 1264 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 FAM207AQ9NSI2 230 aaPredicted RBP13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 IGKV5-2P06315 115 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 TXKP42681 527 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 APBA1Q02410 837 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 HS2ST1Q7LGA3 356 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 CROCCP2Q86T23 111 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 ADAM21Q9UKJ8 722 aa13.54□□□□□ -0.24
RHBDL3-201ENST00000269051 C6orf229H3BNL8 230 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 EEF1GP26641 437 aaKnown RBP13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 TRAPPC10P48553 1259 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 MTMR3Q13615 1198 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 RPS6KA1Q15418 735 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 SFMBT2Q5VUG0 894 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 RSRC1Q96IZ7 334 aaKnown RBP13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 A0A1W2PRG0 241 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 PPFIA4O75335 1185 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 ARID4AP29374 1257 aaPredicted RBP13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 ADD2P35612 726 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 RNASE9P60153 205 aaKnown RBP13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 CCZ1BP86790 482 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 CCZ1P86791 482 aaPredicted RBP13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 SETDB2Q96T68 719 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 UTP11Q9Y3A2 253 aaKnown RBP13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 A0A1B0GUA9 196 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 ACTN4O43707 911 aaKnown RBP13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 RNF40O75150 1001 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 PDE8BO95263 885 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 CASP8Q14790 479 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 BLIDQ8IZY5 108 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 RETREG2Q8NC44 543 aa13.53□□□□□ -0.24
RHBDL3-201ENST00000269051 MRPL12P52815 198 aaKnown RBP13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 KLHL30Q0D2K2 578 aa13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 EFCAB13Q8IY85 973 aa13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 NYXQ9GZU5 481 aa13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 PUS7LQ9H0K6 701 aaKnown RBP13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 MTUS1Q9ULD2 1270 aa13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 A2ML1A8K2U0 1454 aa13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 CEP104O60308 925 aa13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 ARMCX5Q6P1M9 558 aa13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 ZNF804AQ7Z570 1209 aa13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 NCAPD2Q15021 1401 aa13.52□□□□□ -0.24
RHBDL3-201ENST00000269051 SEMA3EO15041 775 aa13.52□□□□□ -0.25
RHBDL3-201ENST00000269051 PCP11498 1178 aaKnown RBP13.52□□□□□ -0.25
RHBDL3-201ENST00000269051 SCG2P13521 617 aa13.52□□□□□ -0.25
RHBDL3-201ENST00000269051 DESP17661 470 aa13.52□□□□□ -0.25
RHBDL3-201ENST00000269051 CALCOCO2Q13137 446 aa13.52□□□□□ -0.25
RHBDL3-201ENST00000269051 KLHL7Q8IXQ5 586 aa13.52□□□□□ -0.25
RHBDL3-201ENST00000269051 WDR19Q8NEZ3 1342 aa13.52□□□□□ -0.25
RHBDL3-201ENST00000269051 PXDNLA1KZ92 1463 aa13.52□□□□□ -0.25
RHBDL3-201ENST00000269051 PTPRMP28827 1452 aa13.52□□□□□ -0.25
RHBDL3-201ENST00000269051 EPHA10Q5JZY3 1008 aa13.52□□□□□ -0.25
RHBDL3-201ENST00000269051 IL25Q9H293 177 aa13.52□□□□□ -0.25
RHBDL3-201ENST00000269051 ABCB6Q9NP58 842 aa13.52□□□□□ -0.25
RHBDL3-201ENST00000269051 ADGRL3Q9HAR2 1447 aa13.51□□□□□ -0.25
RHBDL3-201ENST00000269051 DDAH1O94760 285 aa13.51□□□□□ -0.25
RHBDL3-201ENST00000269051 MEX3CQ5U5Q3 659 aaKnown RBP13.51□□□□□ -0.25
RHBDL3-201ENST00000269051 GRAMD1CQ8IYS0 662 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms