RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 COL23A1Q86Y22 540 aaPredicted RBP15.03■□□□□ -0
THSD1-201ENST00000258613 TRMT1Q9NXH9 659 aaKnown RBP15.03■□□□□ -0
THSD1-201ENST00000258613 PCDHAC2Q9Y5I4 1007 aa15.03■□□□□ -0
THSD1-201ENST00000258613 SCG2P13521 617 aa15.02■□□□□ -0
THSD1-201ENST00000258613 RASA1P20936 1047 aa15.02■□□□□ -0
THSD1-201ENST00000258613 MDM2Q00987 491 aaPredicted RBP15.02■□□□□ -0
THSD1-201ENST00000258613 PTGDRQ13258 359 aa15.02■□□□□ -0
THSD1-201ENST00000258613 SMYD4Q8IYR2 804 aaPredicted RBP15.02■□□□□ -0
THSD1-201ENST00000258613 ZNF444Q8N0Y2 327 aaPredicted RBP15.02■□□□□ -0
THSD1-201ENST00000258613 MTA3Q9BTC8 594 aa15.02■□□□□ -0
THSD1-201ENST00000258613 FANCLQ9NW38 375 aa15.02■□□□□ -0
THSD1-201ENST00000258613 TUBE1Q9UJT0 475 aa15.02■□□□□ -0
THSD1-201ENST00000258613 ZHX1Q9UKY1 873 aaPredicted RBP15.02■□□□□ -0
THSD1-201ENST00000258613 KIAA1551Q9HCM1 1747 aa15.02□□□□□ -0.01
THSD1-201ENST00000258613 BAG3O95817 575 aa15.02□□□□□ -0.01
THSD1-201ENST00000258613 TMC6Q7Z403 805 aa15.02□□□□□ -0.01
THSD1-201ENST00000258613 HOMER1Q86YM7 354 aa15.02□□□□□ -0.01
THSD1-201ENST00000258613 LRRC8AQ8IWT6 810 aa15.02□□□□□ -0.01
THSD1-201ENST00000258613 PDS5AQ29RF7 1337 aaKnown RBP15.02□□□□□ -0.01
THSD1-201ENST00000258613 DDAH1O94760 285 aa15.01□□□□□ -0.01
THSD1-201ENST00000258613 CAVIN2O95810 425 aa15.01□□□□□ -0.01
THSD1-201ENST00000258613 USP17L2Q6R6M4 530 aa15.01□□□□□ -0.01
THSD1-201ENST00000258613 SARM1Q6SZW1 724 aa15.01□□□□□ -0.01
THSD1-201ENST00000258613 SYMPKQ92797 1274 aaKnown RBP15.01□□□□□ -0.01
THSD1-201ENST00000258613 TMEM47Q9BQJ4 181 aa15.01□□□□□ -0.01
THSD1-201ENST00000258613 XBP1P17861 261 aa15.01□□□□□ -0.01
THSD1-201ENST00000258613 ADRA2BP18089 450 aa15.01□□□□□ -0.01
THSD1-201ENST00000258613 RBM6P78332 1123 aaKnown RBP15.01□□□□□ -0.01
THSD1-201ENST00000258613 FMR1Q06787 632 aaKnown RBP eCLIP15.01□□□□□ -0.01
THSD1-201ENST00000258613 CERS5Q8N5B7 392 aa15.01□□□□□ -0.01
THSD1-201ENST00000258613 TNFRSF25Q93038 417 aa15.01□□□□□ -0.01
THSD1-201ENST00000258613 NOL10Q9BSC4 688 aaKnown RBP15.01□□□□□ -0.01
THSD1-201ENST00000258613 SPTLC3Q9NUV7 552 aa15.01□□□□□ -0.01
THSD1-201ENST00000258613 RBM28Q9NW13 759 aaKnown RBP15.01□□□□□ -0.01
THSD1-201ENST00000258613 FAM13BQ9NYF5 915 aa15.01□□□□□ -0.01
THSD1-201ENST00000258613 SRPRBQ9Y5M8 271 aaKnown RBP15.01□□□□□ -0.01
THSD1-201ENST00000258613 CDK8P49336 464 aa15□□□□□ -0.01
THSD1-201ENST00000258613 POSTNQ15063 836 aa15□□□□□ -0.01
THSD1-201ENST00000258613 IL17AQ16552 155 aa15□□□□□ -0.01
THSD1-201ENST00000258613 MRFAP1L1Q96HT8 127 aa15□□□□□ -0.01
THSD1-201ENST00000258613 MAD2L2Q9UI95 211 aa15□□□□□ -0.01
THSD1-201ENST00000258613 MAN1B1Q9UKM7 699 aa15□□□□□ -0.01
THSD1-201ENST00000258613 TMEM232C9JQI7 657 aa15□□□□□ -0.01
THSD1-201ENST00000258613 RHBDL3P58872 404 aa15□□□□□ -0.01
THSD1-201ENST00000258613 TTC38Q5R3I4 469 aa15□□□□□ -0.01
THSD1-201ENST00000258613 TIGD1Q96MW7 591 aa15□□□□□ -0.01
THSD1-201ENST00000258613 UBA5Q9GZZ9 404 aa15□□□□□ -0.01
THSD1-201ENST00000258613 APBA3O96018 575 aa15□□□□□ -0.01
THSD1-201ENST00000258613 CALM1P0DP23 149 aa15□□□□□ -0.01
THSD1-201ENST00000258613 CALM2P0DP24 149 aa15□□□□□ -0.01
THSD1-201ENST00000258613 CALM3P0DP25 149 aa15□□□□□ -0.01
THSD1-201ENST00000258613 ATP2B4P23634 1241 aa15□□□□□ -0.01
THSD1-201ENST00000258613 RCAN1P53805 252 aa15□□□□□ -0.01
THSD1-201ENST00000258613 CACNB3P54284 484 aa15□□□□□ -0.01
THSD1-201ENST00000258613 KLHL10Q6JEL2 608 aa15□□□□□ -0.01
THSD1-201ENST00000258613 HEATR3Q7Z4Q2 680 aa15□□□□□ -0.01
THSD1-201ENST00000258613 MED15Q96RN5 788 aa15□□□□□ -0.01
THSD1-201ENST00000258613 PLIN2Q99541 437 aa15□□□□□ -0.01
THSD1-201ENST00000258613 BLZF1Q9H2G9 400 aa15□□□□□ -0.01
THSD1-201ENST00000258613 FLT1P17948 1338 aa14.99□□□□□ -0.01
THSD1-201ENST00000258613 PPEF1O14829 653 aaPredicted RBP14.99□□□□□ -0.01
THSD1-201ENST00000258613 ACTN4O43707 911 aaKnown RBP14.99□□□□□ -0.01
THSD1-201ENST00000258613 SKILP12757 684 aa14.99□□□□□ -0.01
THSD1-201ENST00000258613 IL1R1P14778 569 aa14.99□□□□□ -0.01
THSD1-201ENST00000258613 STX17P56962 302 aa14.99□□□□□ -0.01
THSD1-201ENST00000258613 PFKFB3Q16875 520 aaPredicted RBP14.99□□□□□ -0.01
THSD1-201ENST00000258613 EYA3Q99504 573 aa14.99□□□□□ -0.01
THSD1-201ENST00000258613 FAM237AA0A1B0GTK4 181 aa14.99□□□□□ -0.01
THSD1-201ENST00000258613 FANCCQ00597 558 aa14.99□□□□□ -0.01
THSD1-201ENST00000258613 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.99□□□□□ -0.01
THSD1-201ENST00000258613 DDX4Q9NQI0 724 aaKnown RBP14.99□□□□□ -0.01
THSD1-201ENST00000258613 DAGLAQ9Y4D2 1042 aa14.99□□□□□ -0.01
THSD1-201ENST00000258613 GPR75-ASB3A0A0A6YYF3 556 aa14.98□□□□□ -0.01
THSD1-201ENST00000258613 FAM196BA6NMK8 535 aa14.98□□□□□ -0.01
THSD1-201ENST00000258613 PP2D1A8MPX8 630 aa14.98□□□□□ -0.01
THSD1-201ENST00000258613 BBOX1O75936 387 aa14.98□□□□□ -0.01
THSD1-201ENST00000258613 MMP10P09238 476 aa14.98□□□□□ -0.01
THSD1-201ENST00000258613 PPP4CP60510 307 aa14.98□□□□□ -0.01
THSD1-201ENST00000258613 SHROOM1Q2M3G4 852 aaPredicted RBP14.98□□□□□ -0.01
THSD1-201ENST00000258613 CEP95Q96GE4 821 aa14.98□□□□□ -0.01
THSD1-201ENST00000258613 DBNDD1Q9H9R9 158 aa14.98□□□□□ -0.01
THSD1-201ENST00000258613 LAMB1P07942 1786 aa14.98□□□□□ -0.01
THSD1-201ENST00000258613 PCP11498 1178 aaKnown RBP14.98□□□□□ -0.01
THSD1-201ENST00000258613 GSTO1P78417 241 aa14.98□□□□□ -0.01
THSD1-201ENST00000258613 WWC2Q6AWC2 1192 aa14.98□□□□□ -0.01
THSD1-201ENST00000258613 ZNF592Q92610 1267 aa14.98□□□□□ -0.01
THSD1-201ENST00000258613 ZNF622Q969S3 477 aaKnown RBP eCLIP14.98□□□□□ -0.01
THSD1-201ENST00000258613 LDHCP07864 332 aa14.97□□□□□ -0.01
THSD1-201ENST00000258613 PPP2R5BQ15173 497 aa14.97□□□□□ -0.01
THSD1-201ENST00000258613 SLC27A3Q5K4L6 730 aa14.97□□□□□ -0.01
THSD1-201ENST00000258613 ARMCX5Q6P1M9 558 aa14.97□□□□□ -0.01
THSD1-201ENST00000258613 FRMPD2Q68DX3 1309 aaPredicted RBP14.97□□□□□ -0.01
THSD1-201ENST00000258613 CDK5RAP2Q96SN8 1893 aa14.97□□□□□ -0.01
THSD1-201ENST00000258613 SERPINC1P01008 464 aa14.97□□□□□ -0.01
THSD1-201ENST00000258613 CCZ1BP86790 482 aa14.97□□□□□ -0.01
THSD1-201ENST00000258613 CCZ1P86791 482 aaPredicted RBP14.97□□□□□ -0.01
THSD1-201ENST00000258613 INF2Q27J81 1249 aa14.97□□□□□ -0.01
THSD1-201ENST00000258613 LRRC47Q8N1G4 583 aaKnown RBP14.97□□□□□ -0.01
THSD1-201ENST00000258613 SAMSN1Q9NSI8 373 aaKnown RBP14.97□□□□□ -0.01
THSD1-201ENST00000258613 KLRF2D3W0D1 207 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms