RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 GREM2Q9H772 168 aa16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 A0A1B0GUA9 196 aa16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 EVA1CP58658 441 aa16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 CCDC40Q4G0X9 1142 aa16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 ZBTB38Q8NAP3 1195 aaPredicted RBP16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 C8orf76Q96K31 380 aa16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 TEX13AQ9BXU3 409 aaPredicted RBP16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 VCPKMTQ9H867 229 aa16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 DDX20Q9UHI6 824 aaKnown RBP16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 DDX60Q8IY21 1712 aaKnown RBP16.7■□□□□ 0.26
TMEM38A-201ENST00000187762 ABL1P00519 1130 aa16.69■□□□□ 0.26
TMEM38A-201ENST00000187762 CSF1RP07333 972 aa16.69■□□□□ 0.26
TMEM38A-201ENST00000187762 ZFYP08048 801 aaPredicted RBP16.69■□□□□ 0.26
TMEM38A-201ENST00000187762 ZKSCAN8Q15776 578 aaPredicted RBP16.69■□□□□ 0.26
TMEM38A-201ENST00000187762 GSPT2Q8IYD1 628 aaKnown RBP16.69■□□□□ 0.26
TMEM38A-201ENST00000187762 PIGBQ92521 554 aa16.69■□□□□ 0.26
TMEM38A-201ENST00000187762 ABCA3Q99758 1704 aa16.69■□□□□ 0.26
TMEM38A-201ENST00000187762 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.69■□□□□ 0.26
TMEM38A-201ENST00000187762 ZNF18P17022 549 aa16.69■□□□□ 0.26
TMEM38A-201ENST00000187762 CDC27P30260 824 aa16.69■□□□□ 0.26
TMEM38A-201ENST00000187762 CENPHQ9H3R5 247 aa16.69■□□□□ 0.26
TMEM38A-201ENST00000187762 TTF2Q9UNY4 1162 aaKnown RBP16.69■□□□□ 0.26
TMEM38A-201ENST00000187762 FRMD3A2A2Y4 597 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 KIF28PB7ZC32 967 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 ZNF213O14771 459 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 ITGA6P23229 1130 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 LDHAL6AQ6ZMR3 332 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 YTHDF3Q7Z739 585 aaKnown RBP16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 RALYLQ86SE5 291 aaKnown RBP16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 FBXL16Q8N461 479 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 NCOA7Q8NI08 942 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 CNKSR2Q8WXI2 1034 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 NBPF3Q9H094 633 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 TARSL2A2RTX5 802 aaKnown RBP16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 ANKRD33BA6NCL7 494 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 C4AP0C0L4 1744 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 C4BP0C0L5 1744 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 MYBL2P10244 700 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 RXRAP19793 462 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 TRIM28Q13263 835 aaKnown RBP16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 MYSM1Q5VVJ2 828 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 MICALCLQ6ZW33 695 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 CEP57Q86XR8 500 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 ZNF483Q8TF39 744 aaPredicted RBP16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 NFE2L3Q9Y4A8 694 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 RIPOR2Q9Y4F9 1068 aa16.68■□□□□ 0.26
TMEM38A-201ENST00000187762 GOLGA8KD6RF30 607 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 ZMYND10O75800 440 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 SKOR1P84550 965 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 PLCB4Q15147 1175 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 ACRBPQ8NEB7 543 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 AIFM3Q96NN9 605 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 PLA2G12BQ9BX93 195 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 SLC40A1Q9NP59 571 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 SH3BP1Q9Y3L3 701 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 SOS2Q07890 1332 aaPredicted RBP16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 CPLX1O14810 134 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 BMP6P22004 513 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 NR1I3Q14994 352 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 ANKRD18AQ8IVF6 992 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 TTLL11Q8NHH1 800 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 MYO1AQ9UBC5 1043 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 HOOK1Q9UJC3 728 aaKnown RBP16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
TMEM38A-201ENST00000187762 RBL2Q08999 1139 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 PDCLQ13371 301 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 SLC9C2Q5TAH2 1124 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 ANO1Q5XXA6 986 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 TLDC1Q6P9B6 456 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 CCDC13Q8IYE1 715 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 PAGR1Q9BTK6 254 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 CNNM1Q9NRU3 951 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 HPSEQ9Y251 543 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 MAP3K15Q6ZN16 1313 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 MARCKSP29966 332 aaPredicted RBP16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 SNCBQ16143 134 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 NLRP10Q86W26 655 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 METTL16Q86W50 562 aaKnown RBP16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 TBC1D10CQ8IV04 446 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 FOXP4Q8IVH2 680 aaPredicted RBP16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 TATDN2Q93075 761 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 PIH1D3Q9NQM4 214 aaKnown RBP16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 ITGB4P16144 1822 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 IDH1O75874 414 aaKnown RBP16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 PDHBP11177 359 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 ADD2P35612 726 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 CDR1P51861 262 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 FMR1Q06787 632 aaKnown RBP eCLIP16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 RNF187Q5TA31 235 aaPredicted RBP16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 GIGYF2Q6Y7W6 1299 aaKnown RBP16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 CCNI2Q6ZMN8 369 aaPredicted RBP16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 SYNE3Q6ZMZ3 975 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 CYB5R4Q7L1T6 521 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 PPFIBP1Q86W92 1011 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 KIRREL3Q8IZU9 778 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 ARMC2Q8NEN0 867 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 CPLX3Q8WVH0 158 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 SENP2Q9HC62 589 aa16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.66■□□□□ 0.26
TMEM38A-201ENST00000187762 PCDHA5Q9Y5H7 936 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms