RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 FntaQ61239 377 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 MmeQ61391 750 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Cnga2Q62398 664 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Rbm15bQ6PHZ5 887 aaKnown RBP13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Srgap2Q91Z67 1071 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Stag1Q9D3E6 1258 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Letm1Q9Z2I0 738 aa13.07□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Col22a1E9Q7P1 1613 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Scgb2b18A0A087WPA9 112 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Kiaa1468Q148V7 1216 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Ankrd23Q812A3 306 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Olfm5Q8BU90 496 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Paf1Q8K2T8 535 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 NapgQ9CWZ7 312 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Fam217aQ9D9W6 419 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Ubr2Q6WKZ8 1755 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Enc1O35709 589 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 RargP18911 458 aaKnown RBP13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Nkx2-5P42582 318 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Rad23bP54728 416 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Cct6aP80317 531 aaKnown RBP13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Smarcc1P97496 1104 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Madcam1Q61826 405 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Secisbp2lQ6A098 1086 aaKnown RBP13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Tacc1Q6Y685 774 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Recql4Q75NR7 1216 aaKnown RBP13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Lrrc1Q80VQ1 524 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Q8K2W9 541 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Znf131Q8K3J5 619 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Slc51aQ8R000 340 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Itga2bQ9QUM0 1033 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Sorbs3Q9R1Z8 733 aa13.06□□□□□ -0.32
Col9a1-202ENSMUST00000088349 4932429P05RikA2ADI4 785 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Gm28042B7ZCM9 1014 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Cyp3a25O09158 503 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Tdo2P48776 406 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Q3TYL0 343 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Exoc8Q6PGF7 716 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Tas2r124Q7M718 309 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Rnf41Q8BH75 317 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 NelfbQ8C4Y3 580 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Rbm5Q91YE7 815 aaKnown RBP13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Sgpp1Q9JI99 430 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Myh2G3UW82 1942 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Kcnh4A2A5F7 1018 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 MarcksP26645 309 aaKnown RBP13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Stn1Q8K2X3 378 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Lgr5Q9Z1P4 907 aa13.05□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Tnrc6cQ3UHC0 1690 aaKnown RBP13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Frmd7A2AD83 703 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Gucy1a2F8VQK3 730 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Cfap100Q80VN0 613 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Hexim1Q8R409 356 aaKnown RBP13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Tpcn1Q9EQJ0 817 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Uchl5Q9WUP7 329 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Gja10Q9WUS4 505 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Tmem232Q5K6N0 675 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Tiam2Q6ZPF3 1715 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Trim29Q8R2Q0 587 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Copb1Q9JIF7 953 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Tob2Q9JM55 345 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Pak1O88643 545 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Tlr8P58682 1032 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Igbp1Q61249 340 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Q8C1R3 189 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Pus7lQ8CE46 702 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Ccdc14Q8K2J4 934 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Brms1Q99N20 246 aa13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Uso1Q9Z1Z0 959 aaKnown RBP13.04□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Cyp26c1B2RXA7 518 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Rexo5D3YW29 759 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Trap1aP19473 224 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 GabrdP22933 449 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Olfr121Q5CZY0 321 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Sh2b1Q91ZM2 756 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Tpp1O89023 562 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 PpardP35396 440 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Pbx1P41778 430 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Capza3P70190 299 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Meis3P97368 378 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Nme8Q715T0 586 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Nek5Q7TSC3 627 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Tango6Q8C3S2 1079 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Spice1Q8C804 860 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Card14Q99KF0 999 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Krt82Q99M74 516 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Col20a1Q923P0 1320 aa13.03□□□□□ -0.32
Col9a1-202ENSMUST00000088349 UtrnE9Q6R7 3430 aa13.02□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Gm42641I6L9G2 585 aa13.02□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Nck2O55033 380 aa13.02□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Gnat2P50149 354 aa13.02□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Fchsd1Q6PFY1 688 aa13.02□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Txndc16Q7TN22 820 aa13.02□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Epn1Q80VP1 575 aa13.02□□□□□ -0.32
Col9a1-202ENSMUST00000088349 AtripQ8BMG1 785 aa13.02□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Kif2bQ8C0N1 668 aa13.02□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Fam161bQ8CB59 589 aa13.02□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Lztfl1Q9JHQ5 299 aa13.02□□□□□ -0.32
Col9a1-202ENSMUST00000088349 Apol7aB2RT54 418 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Cdh15P33146 784 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms