RNA–Protein interactions for RNA: ENSMUST00000071588.7

Nkx6-3-201, Transcript of Homeobox protein Nkx-6.3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx6-3, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3-201ENSMUST00000071588 Usp44Q8C2S0 711 aa15.2■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Tldc1Q8K0P3 455 aa15.2■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Krt25Q8VCW2 446 aa15.2■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Rdm1Q9CQK3 281 aa15.2■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ipo7Q9EPL8 1038 aaKnown RBP15.2■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Pus3Q9JI38 481 aa15.2■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Cdc27A2A6Q5 825 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Trim30cD3YVI9 513 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Rexo5D3YW29 759 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Cyp2d10P24456 504 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Slc12a2P55012 1205 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Psmb7P70195 277 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Atp8a2P98200 1148 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Spout1Q3UHX9 385 aaKnown RBP15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Cct6bQ61390 531 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 ZyxQ62523 564 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Rbm26Q6NZN0 1012 aaKnown RBP15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Kank3Q9Z1P7 791 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Eva1cP58659 440 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Flt3Q00342 1000 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Mum1l1Q4VA55 681 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Mrps31Q61733 384 aaKnown RBP15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Golim4Q8BXA1 655 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Arhgef6Q8K4I3 771 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Tube1Q9D6T1 475 aa15.19■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Kdm3aQ6PCM1 1323 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Npc1l1Q6T3U4 1333 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Irgm2A0A140LIF8 407 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ttc13A0A1L1SSC7 844 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Gcom1E9PZ54 550 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ugt1a6bK9J7B2 531 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Pla2g4bP0C871 782 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Nkx2-5P42582 318 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 MyzapQ3UIJ9 466 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ugt1a6Q64435 531 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ugt1a7cQ6ZQM8 531 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 3830417A13RikQ8BQJ2 303 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ccdc158Q8CDI6 1109 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Six6os1Q9CTN5 574 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ppil4Q9CXG3 492 aaKnown RBP15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ebag9Q9D0V7 213 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Paip2Q9D6V8 124 aa15.18■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Prl7a2O54831 253 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Slurp2P0DP59 97 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ppfia3P60469 1194 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Top1Q04750 767 aaKnown RBP15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Gspt2Q149F3 632 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 NntQ61941 1086 aaKnown RBP15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Bpifb6Q8BU51 449 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Srek1Q8BZX4 494 aaKnown RBP15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ndufab1Q9CR21 156 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Plekho1Q9JIY0 408 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Gja10Q9WUS4 505 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Duox1A2AQ92 1551 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ubr3Q5U430 1889 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Usp42B2RQC2 1324 aaKnown RBP15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Proca1B0QZF7 307 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Gm5624F6ZZG8 207 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 NppbP40753 121 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Eif5P59325 429 aaKnown RBP15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Pfkfb2P70265 519 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Cct2P80314 535 aaKnown RBP15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Jdp2P97875 163 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 LyarQ08288 388 aaKnown RBP15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Brsk2Q69Z98 735 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Gga2Q6P5E6 603 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Msl1Q6PDM1 616 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Necab1Q8BG18 352 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Kif2bQ8C0N1 668 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Phldb2Q8K1N2 1249 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 MyripQ8K3I4 856 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Znf445Q8R2V3 986 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 CpzQ8R4V4 654 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Gkap1Q9JMB0 366 aa15.17■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Col11a2Q64739 1736 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Krt86P97861 486 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Clul1Q3ZRW6 464 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Foxd1Q61345 456 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 CgasQ8C6L5 507 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Leng8Q8CBY3 785 aaKnown RBP15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 ParnQ8VDG3 624 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Sycp2lA0A0M3U1B0 842 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ccng2O08918 344 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Mnat1P51949 309 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Q8BWG4 1187 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Fam84aQ9D650 292 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Calr3Q9D9Q6 380 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Popdc2Q9ES82 367 aa15.16■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Atp8b5A3FIN4 1183 aa15.15■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Nab2Q61127 525 aa15.15■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 BrapQ99MP8 591 aa15.15■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Cbx6Q9DBY5 414 aa15.15■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Adamtsl1Q8BLI0 1745 aa15.15■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Cfap99A0A140LIX9 648 aa15.15■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Slc4a1P04919 929 aa15.15■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Plbd2Q3TCN2 594 aa15.15■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Gm28047Q3US59 414 aa15.15■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Ankrd40Q5SUE8 363 aa15.15■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Stambpl1Q76N33 436 aa15.15■□□□□ 0.02
Nkx6-3-201ENSMUST00000071588 Rnf187Q8BFX1 236 aa15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms