RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Akap8Q9DBR0 687 aaKnown RBP13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Cfap70D3YVL2 1141 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Ube3aO08759 870 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Tas2r124Q7M718 309 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Pdzph1Q8BGR1 1238 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Q8BZJ8 459 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Tmx1Q8VBT0 278 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Tubgcp2Q921G8 905 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Glrx3Q9CQM9 337 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Bach1P97302 739 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Hdhd2Q3UGR5 259 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Sfi1Q3UZY0 1216 aaKnown RBP13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Ctage5Q8R311 779 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Mcm5P49718 733 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Cacnb3P54285 484 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Neurog2P70447 263 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Trappc10Q3TLI0 1259 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Cetn3O35648 167 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Grem2O88273 168 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Otop3Q80UF9 577 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Plcg2Q8CIH5 1265 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Plcd3Q8K2J0 785 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Sorbs3Q9R1Z8 733 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Fyb2A2A995 729 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Islr2Q5RKR3 745 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Xpo5Q924C1 1204 aaKnown RBP13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Med1Q925J9 1575 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Dnajc25A2ALW5 357 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Ccdc78D3Z5T1 437 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Dnajb6O54946 365 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 SfpqQ8VIJ6 699 aaKnown RBP13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Erlin1Q91X78 346 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Stk39Q9Z1W9 556 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 DccP70211 1447 aa13.25□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Sema6bO54951 886 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Krt13P08730 437 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Ms4a2P20490 235 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Plcb1Q9Z1B3 1216 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Carmil3Q3UFQ8 1375 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Mex3cQ05A36 652 aaKnown RBP13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Ppfibp1Q8C8U0 969 aaKnown RBP13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Sumf1Q8R0F3 372 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Prpf3Q922U1 683 aaKnown RBP13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Mier3Q3UHF3 551 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Ccdc73Q8CDM4 1066 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 BaatQ91X34 420 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Med10Q9CXU0 135 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Pex3Q9QXY9 372 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Eef2P58252 858 aaKnown RBP13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Psmb7P70195 277 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Dclk3Q8BWQ5 790 aa13.24□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Pym1Q8CHP5 203 aaKnown RBP13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Tagap1P0CAX8 505 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Fgfr1opQ66JX5 399 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Flt1P35969 1333 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Kif23E9Q5G3 953 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 1700113H08RikE9Q9Q5 327 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 EgfrQ01279 1210 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Sdccag8Q80UF4 717 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Usp14Q9JMA1 493 aaKnown RBP13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Col16a1Q8BLX7 1580 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Arhgef10lA2AWP8 1280 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Bpifb4A2BGH0 617 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Cyp2c69E9PXC3 491 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Alppl2P24823 529 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Cyp2c40P56657 491 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Rnf187Q8BFX1 236 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Ctdspl2Q8BG15 465 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Terb1Q8C0V1 768 aa13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Tnrc6bQ8BKI2 1810 aaKnown RBP13.23□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Krt24A1L317 512 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Acot10Q32MW3 439 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Eepd1Q3TGW2 569 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Slc7a6osQ7TPE5 306 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Xpo4Q9ESJ0 1151 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Znf496Q5SXI5 585 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Sass6Q80UK7 654 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Sap130Q8BIH0 1057 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Fam76aQ922G2 307 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Capn12Q9ER56 720 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Tldc2A2ACG1 198 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Tmem132dQ76HP3 1097 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Galnt15Q9D2N8 638 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 CsadQ9DBE0 493 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Ap1b1O35643 943 aaKnown RBP13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Psd3Q2PFD7 1037 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Fsip1Q9D3V5 435 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 C3P01027 1663 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Gm11549A0A286YD83 63 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Tph1P17532 447 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Zfp51Q3U4L8 781 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Tfcp2l1Q3UNW5 479 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Nacc1Q7TSZ8 514 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Kcnv2Q8CFS6 562 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Ddx39aQ8VDW0 427 aaKnown RBP13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Atp5c1Q91VR2 298 aaKnown RBP13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Asic2Q925H0 512 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Cst12Q9DAN8 128 aa13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Noc2lQ9WV70 747 aaKnown RBP13.22□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Gm28919A0A087WP35 240 aa13.21□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms