RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Angptl3Q9R182 455 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Rims2Q9EQZ7 1530 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 1700018F24RikB2RW27 314 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Tdo2P48776 406 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Rad23aP54726 363 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Vps33bP59016 617 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Bach1P97302 739 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Cnpy3Q9DAU1 276 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 SbdsP70122 250 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Atp1a2Q6PIE5 1020 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Acbd3Q8BMP6 525 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Iws1Q8C1D8 766 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Pak2Q8CIN4 524 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Adamts7Q68SA9 1657 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Frmpd4A2AFR3 1320 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Dnajc25A2ALW5 357 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 NpeppsQ11011 920 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ttll4Q80UG8 1193 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Vps37cQ8R105 352 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Rilpl1Q9JJC6 406 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Myl7Q9QVP4 175 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Col15a1O35206 1367 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Tcof1O08784 1320 aaKnown RBP11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Atp6v0a2P15920 856 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Kif5cP28738 956 aaKnown RBP11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Aggf1Q7TN31 711 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 HdlbpQ8VDJ3 1268 aaKnown RBP11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Emilin1Q99K41 1017 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Copb1Q9JIF7 953 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Kcnq5Q9JK45 933 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Gpaa1Q9WTK3 621 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Usp32F8VPZ3 1604 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Dip2bQ3UH60 1574 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ap1b1O35643 943 aaKnown RBP11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Hspa2P17156 633 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Fam107bQ3TGF2 131 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Cbx6Q9DBY5 414 aa11.43□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 AK157302I3ITR1 129 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 FosP01101 380 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 MmeQ61391 750 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Spa17Q62252 149 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Nlrp9bQ66X22 1003 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Acot11Q8VHQ9 594 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Mei1Q9D4I2 1268 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Isca1Q9D924 129 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Olfr247E9PVJ7 320 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Olfr819K7N727 320 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Snx25Q3ZT31 840 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ccdc57Q6PHN1 1016 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Anks1bQ8BIZ1 1259 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Tmx1Q8VBT0 278 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Gtf2iQ9ESZ8 998 aaKnown RBP11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 ChmQ9QXG2 665 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Suclg2Q9Z2I8 433 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Rps6ka1P18653 724 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Nom1Q3UFM5 854 aaKnown RBP11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Mettl14Q3UIK4 456 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Slc38a10Q5I012 1090 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Tsga10Q6NY15 697 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 RragaQ80X95 313 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ankk1Q8BZ25 745 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Tpcn1Q9EQJ0 817 aa11.42□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 1700013D24RikQ0P521 120 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Pls1Q3V0K9 630 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Oxr1Q4KMM3 866 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ppp2r5eQ61151 467 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Rsbn1lD3Z0K6 821 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ppfibp2O35711 882 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Trim6Q8BGE7 488 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Slc4a8Q8JZR6 1089 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Zbtb7aO88939 569 aaKnown RBP11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Tsr1Q5SWD9 803 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Krt14Q61781 484 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ccdc25Q78PG9 208 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Trim56Q80VI1 734 aaKnown RBP11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Sec62Q8BU14 398 aaKnown RBP11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Krt222Q8CCX5 294 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ccdc14Q8K2J4 934 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Lrp2bpQ9D4C6 346 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Sept3Q9Z1S5 350 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Zdhhc9P59268 364 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Slc7a6osQ7TPE5 306 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ctdspl2Q8BG15 465 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Cd209bQ8CJ91 325 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Tnpo2Q99LG2 887 aaKnown RBP11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Lonp2Q9DBN5 852 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Golga5Q9QYE6 729 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 DnmbpQ6TXD4 1580 aa11.41□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Kcnb2A6H8H5 907 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Exoc3l2D3YUP5 789 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Atp2a2O55143 1044 aaKnown RBP11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 DnttP09838 530 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Tcp1P11983 556 aaKnown RBP11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Gm5592Q3V0A6 857 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Sp4Q62445 782 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Cnnm4Q69ZF7 771 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Hdac4Q6NZM9 1076 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Msl1Q6PDM1 616 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Tspyl4Q8VD63 406 aa11.4□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ebag9Q9D0V7 213 aa11.4□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms