RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Vcam1P29533 739 aa26.3■■□□□ 1.8
Cln6-201ENSMUST00000034776 Nod2Q8K3Z0 1020 aa26.3■■□□□ 1.8
Cln6-201ENSMUST00000034776 Vps16Q920Q4 839 aa26.3■■□□□ 1.8
Cln6-201ENSMUST00000034776 Psme4Q5SSW2 1843 aa26.3■■□□□ 1.8
Cln6-201ENSMUST00000034776 Tex13cD3YU32 604 aa26.29■■□□□ 1.8
Cln6-201ENSMUST00000034776 Csf1rP09581 977 aa26.29■■□□□ 1.8
Cln6-201ENSMUST00000034776 Map3k12Q60700 888 aa26.29■■□□□ 1.8
Cln6-201ENSMUST00000034776 Kcnf1Q7TSH7 493 aa26.29■■□□□ 1.8
Cln6-201ENSMUST00000034776 Calml3Q9D6P8 149 aa26.29■■□□□ 1.8
Cln6-201ENSMUST00000034776 Tfap4Q9JIZ5 338 aa26.29■■□□□ 1.8
Cln6-201ENSMUST00000034776 C87499Q3UX49 493 aa26.29■■□□□ 1.8
Cln6-201ENSMUST00000034776 CrkQ64010 304 aa26.29■■□□□ 1.8
Cln6-201ENSMUST00000034776 Cep85Q8BMK0 761 aa26.29■■□□□ 1.8
Cln6-201ENSMUST00000034776 Mtmr4Q91XS1 1190 aa26.29■■□□□ 1.8
Cln6-201ENSMUST00000034776 A430078G23RikE9Q7Y4 484 aa26.28■■□□□ 1.8
Cln6-201ENSMUST00000034776 Slc7a1Q09143 622 aa26.28■■□□□ 1.8
Cln6-201ENSMUST00000034776 PRAG1Q571I4 1179 aa26.28■■□□□ 1.8
Cln6-201ENSMUST00000034776 ErfeQ6PGN1 340 aa26.28■■□□□ 1.8
Cln6-201ENSMUST00000034776 Nat10Q8K224 1024 aaKnown RBP26.28■■□□□ 1.8
Cln6-201ENSMUST00000034776 LdhaP06151 332 aaKnown RBP26.27■■□□□ 1.8
Cln6-201ENSMUST00000034776 Slc9a1Q61165 820 aa26.27■■□□□ 1.8
Cln6-201ENSMUST00000034776 Ddx31Q6NZQ2 687 aaKnown RBP26.27■■□□□ 1.8
Cln6-201ENSMUST00000034776 Gga3Q8BMI3 718 aa26.27■■□□□ 1.8
Cln6-201ENSMUST00000034776 Tmem60Q8K174 133 aa26.27■■□□□ 1.8
Cln6-201ENSMUST00000034776 Dctpp1Q9QY93 170 aa26.27■■□□□ 1.8
Cln6-201ENSMUST00000034776 Pex1Q5BL07 1284 aa26.27■■□□□ 1.8
Cln6-201ENSMUST00000034776 Col5a2Q3U962 1497 aa26.26■■□□□ 1.79
Cln6-201ENSMUST00000034776 Grin2dQ03391 1323 aa26.26■■□□□ 1.79
Cln6-201ENSMUST00000034776 A0A0U1RNP2 1173 aa26.26■■□□□ 1.79
Cln6-201ENSMUST00000034776 Lmnb1P14733 588 aaKnown RBP26.26■■□□□ 1.79
Cln6-201ENSMUST00000034776 Scnn1aQ61180 699 aa26.26■■□□□ 1.79
Cln6-201ENSMUST00000034776 Nrbp1Q99J45 535 aa26.26■■□□□ 1.79
Cln6-201ENSMUST00000034776 1700003F12RikA2AKE5 210 aa26.26■■□□□ 1.79
Cln6-201ENSMUST00000034776 Mboat4P0C7A3 435 aa26.26■■□□□ 1.79
Cln6-201ENSMUST00000034776 Grm4Q68EF4 912 aa26.26■■□□□ 1.79
Cln6-201ENSMUST00000034776 IarsQ8BU30 1262 aa26.26■■□□□ 1.79
Cln6-201ENSMUST00000034776 Sept14Q9DA97 430 aa26.26■■□□□ 1.79
Cln6-201ENSMUST00000034776 Zfp853A0A1D5RM95 733 aa26.25■■□□□ 1.79
Cln6-201ENSMUST00000034776 Kcna1P16388 495 aa26.25■■□□□ 1.79
Cln6-201ENSMUST00000034776 Lamc2Q61092 1191 aa26.25■■□□□ 1.79
Cln6-201ENSMUST00000034776 Luc7l2Q7TNC4 392 aaKnown RBP26.25■■□□□ 1.79
Cln6-201ENSMUST00000034776 LRWD1Q8BUI3 648 aaKnown RBP26.25■■□□□ 1.79
Cln6-201ENSMUST00000034776 Ints4Q8CIM8 964 aa26.25■■□□□ 1.79
Cln6-201ENSMUST00000034776 Wdr64Q9D565 1086 aa26.25■■□□□ 1.79
Cln6-201ENSMUST00000034776 Itgb4A2A863 1818 aa26.24■■□□□ 1.79
Cln6-201ENSMUST00000034776 Tbc1d2B1AVH7 922 aa26.24■■□□□ 1.79
Cln6-201ENSMUST00000034776 Aco1P28271 889 aaKnown RBP26.24■■□□□ 1.79
Cln6-201ENSMUST00000034776 Usp13Q5BKP2 858 aa26.24■■□□□ 1.79
Cln6-201ENSMUST00000034776 Pdzph1Q8BGR1 1238 aa26.24■■□□□ 1.79
Cln6-201ENSMUST00000034776 Trim29Q8R2Q0 587 aa26.24■■□□□ 1.79
Cln6-201ENSMUST00000034776 Cnpy2Q9QXT0 182 aa26.24■■□□□ 1.79
Cln6-201ENSMUST00000034776 Dpp8Q80YA7 892 aa26.24■■□□□ 1.79
Cln6-201ENSMUST00000034776 Gpr101Q80T62 511 aa26.23■■□□□ 1.79
Cln6-201ENSMUST00000034776 Kctd3Q8BFX3 815 aa26.23■■□□□ 1.79
Cln6-201ENSMUST00000034776 Yipf1Q91VU1 306 aa26.23■■□□□ 1.79
Cln6-201ENSMUST00000034776 Atp12aQ9Z1W8 1035 aa26.23■■□□□ 1.79
Cln6-201ENSMUST00000034776 Frmpd3A0A140LIW3 1774 aa26.23■■□□□ 1.79
Cln6-201ENSMUST00000034776 Cdh15P33146 784 aa26.23■■□□□ 1.79
Cln6-201ENSMUST00000034776 Rhpn1Q61085 643 aa26.23■■□□□ 1.79
Cln6-201ENSMUST00000034776 Zfp646Q6NV66 1788 aa26.23■■□□□ 1.79
Cln6-201ENSMUST00000034776 Btn2a2A4QPC6 514 aa26.22■■□□□ 1.79
Cln6-201ENSMUST00000034776 Fbln2P37889 1221 aa26.22■■□□□ 1.79
Cln6-201ENSMUST00000034776 Spata18Q0P557 537 aa26.22■■□□□ 1.79
Cln6-201ENSMUST00000034776 Kiaa1524Q8BWY9 907 aa26.22■■□□□ 1.79
Cln6-201ENSMUST00000034776 Tubgcp2Q921G8 905 aa26.22■■□□□ 1.79
Cln6-201ENSMUST00000034776 VirmaA2AIV2 1811 aaKnown RBP26.22■■□□□ 1.79
Cln6-201ENSMUST00000034776 Pitpnm2Q6ZPQ6 1335 aa26.22■■□□□ 1.79
Cln6-201ENSMUST00000034776 Arid4aF8VPQ2 1261 aaKnown RBP26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Zkscan4Q5SZT6 480 aa26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Glra4Q61603 456 aa26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Cnnm4Q69ZF7 771 aa26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Gm5114W4VSN8 858 aa26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Pabpc1lA2A5N3 607 aaKnown RBP26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Lilrb3P97484 841 aa26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Gzf1Q4VBD9 706 aa26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Ano6Q6P9J9 911 aa26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Zbtb39Q6PDK0 712 aa26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Galnt17Q7TT15 598 aa26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Dlg1Q811D0 905 aaKnown RBP26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Pdcl3Q8BVF2 240 aa26.21■■□□□ 1.79
Cln6-201ENSMUST00000034776 Ccdc6D3YZP9 469 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 Gm21969J3QJZ1 289 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 Gcnt1Q09324 428 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 CbarpQ66L44 698 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 Hdac4Q6NZM9 1076 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 Tmc4Q7TQ65 694 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 Clic6Q8BHB9 596 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 Slu7Q8BHJ9 585 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 Ppp1r11Q8K1L5 131 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 Gtf3c5Q8R2T8 520 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 Tlcd1Q99JT6 247 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 Scrn1Q9CZC8 414 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 Nr2e3Q9QXZ7 395 aa26.2■■□□□ 1.79
Cln6-201ENSMUST00000034776 Plxnb2B2RXS4 1842 aa26.2■■□□□ 1.78
Cln6-201ENSMUST00000034776 Gm30191A0A0U1RNT7 187 aa26.2■■□□□ 1.78
Cln6-201ENSMUST00000034776 Nucb2P81117 420 aa26.2■■□□□ 1.78
Cln6-201ENSMUST00000034776 Nbr1P97432 988 aa26.2■■□□□ 1.78
Cln6-201ENSMUST00000034776 Slc10a5Q5PT54 434 aa26.2■■□□□ 1.78
Cln6-201ENSMUST00000034776 Ttll1Q91V51 423 aa26.2■■□□□ 1.78
Cln6-201ENSMUST00000034776 Cdc27A2A6Q5 825 aa26.19■■□□□ 1.78
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms