RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Clec4a4Q5YIR8 236 aa12.83□□□□□ -0.36
Trim55-201ENSMUST00000029139 IqceQ6PCQ0 778 aa12.83□□□□□ -0.36
Trim55-201ENSMUST00000029139 Champ1Q8K327 802 aaKnown RBP12.83□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gdap2Q9DBL2 498 aa12.83□□□□□ -0.36
Trim55-201ENSMUST00000029139 Kif13aQ9EQW7 1749 aa12.83□□□□□ -0.36
Trim55-201ENSMUST00000029139 Scgb2b21A0A087WQA9 112 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gm6685D3YYP3 228 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Klc1O88447 541 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Rad23aP54726 363 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Hook2Q7TMK6 716 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Sptlc3Q8BG54 563 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Cpsf7Q8BTV2 471 aaKnown RBP12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Phldb2Q8K1N2 1249 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Cep57l1Q8VDS7 400 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 RarsQ9D0I9 660 aaKnown RBP12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Get4Q9D1H7 327 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 U2af1Q9D883 239 aaKnown RBP12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Dmap1Q9JI44 468 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Carmil3Q3UFQ8 1375 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Nsd2Q8BVE8 1365 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 PalldQ9ET54 1408 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ccdc24E9PUW8 296 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Eef2kO08796 724 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Lire1P11260 357 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Nat3P50296 290 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ccdc42Q5SV66 316 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Krt82Q99M74 516 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 BrapQ99MP8 591 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Filip1Q9CS72 1211 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Scrn1Q9CZC8 414 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ascc1Q9D8Z1 356 aaKnown RBP12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 IgtpQ9DCE9 423 aa12.82□□□□□ -0.36
Trim55-201ENSMUST00000029139 A0A1W2P6Q8 802 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gm9048A0A1W2P7H4 802 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 A0A1W2P7S8 802 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 A0A1W2P7Z8 802 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gm9046A0A1W2P855 802 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 PigrO70570 771 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Cdc25aP48964 514 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Lrrn4P59383 733 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ccdc127Q3TC33 260 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Rnpc3Q3UZ01 514 aaKnown RBP12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Nr6a1Q64249 495 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Cdc5lQ6A068 802 aaKnown RBP12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Morc4Q8BMD7 928 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ildr1Q8CBR1 537 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Aldh1l2Q8K009 923 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Mtmr3Q8K296 1196 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Klhl40Q9D783 621 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 GgcxQ9QYC7 757 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Klhl41A2AUC9 606 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gm1141B9EJU1 475 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Trim34bJ3QNR8 485 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ovgp1Q62010 721 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Arhgef6Q8K4I3 771 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Pcdha5Q91Y15 934 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Trim34aQ99PP6 485 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ybx3Q9JKB3 361 aaKnown RBP12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 NbnQ9R207 751 aa12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Tcof1O08784 1320 aaKnown RBP12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Nup153E9Q3G8 1462 aaKnown RBP12.81□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gm44503E9PYU5 387 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Hcls1P49710 486 aaKnown RBP12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gsdma2Q32M21 443 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Usp33Q8R5K2 909 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Fgd4Q91ZT5 766 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Noa1Q9JJG9 693 aaKnown RBP12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Capn15Q9JLG8 1095 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gm28510A0A087WP28 240 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Tex13c2A0A0G2JGA3 530 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Nfxl1E9Q8I7 918 aaKnown RBP12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ets2P15037 468 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Smcr8Q3UMB5 935 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Usp28Q5I043 1051 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Bpifb6Q8BU51 449 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ctage5Q8R311 779 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gimap7Q8R379 293 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Pcdhb4Q91XZ6 784 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Haus2Q9CQS9 234 aa12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Rad18Q9QXK2 509 aaKnown RBP12.8□□□□□ -0.36
Trim55-201ENSMUST00000029139 Hmox1P14901 289 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Fhdc1Q3ULZ2 1149 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ubash3aQ3V3E1 624 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Arhgap44Q5SSM3 814 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Asap3Q5U464 904 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Rnf220Q6PDX6 566 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 TufmQ8BFR5 452 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Tti2Q8BGV4 512 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Wdr37Q8CBE3 496 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Klhl10Q9D5V2 608 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ccdc91Q9D8L5 442 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Col4a3bpQ9EQG9 624 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gfpt2Q9Z2Z9 682 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Rims1Q99NE5 1463 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gbp6A0A0G2JDV3 611 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Bicdl1A0JNT9 577 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gm43302L7N1X8 611 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Nr1i3O35627 358 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Nr1i2O54915 431 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Itga6Q61739 1091 aa12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 57.7 ms