RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Zfp275G3X904 499 aa10.28□□□□□ -0.76
Ctc1-201ENSMUST00000021278 LdhaP06151 332 aaKnown RBP10.28□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Ets2P15037 468 aa10.28□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Lins1Q3U1D0 764 aa10.28□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Dnajc8Q6NZB0 253 aaKnown RBP10.28□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Sv2bQ8BG39 683 aa10.28□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Srgap2Q91Z67 1071 aa10.28□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Abcf2Q99LE6 628 aaKnown RBP10.28□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Ccdc43Q9CR29 222 aaKnown RBP10.28□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Krt71Q9R0H5 524 aa10.28□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Rims1Q99NE5 1463 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Fam47eD3YWC7 402 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Fen1P39749 378 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Neurod6P48986 337 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 EnahQ03173 802 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Sox13Q04891 613 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Ppp1r21Q3TDD9 780 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Pyroxd1Q3TMV7 498 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Tubb2aQ7TMM9 445 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Kcns3Q8BQZ8 491 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Pms1Q8K119 917 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Tubb2bQ9CWF2 445 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 Plcb1Q9Z1B3 1216 aa10.27□□□□□ -0.76
Ctc1-201ENSMUST00000021278 PtprvP70289 1705 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Cetn3O35648 167 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Stmn2P55821 179 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Klra3Q64329 266 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 TdrkhQ80VL1 560 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Apol7cQ8C6E1 369 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Coq6Q8R1S0 476 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Rufy3Q9D394 469 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 1700109H08RikQ9D9C0 210 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ift81O35594 676 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ighmbp2P40694 993 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Stat1P42225 749 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Gbp10Q000W5 611 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Phactr1Q2M3X8 580 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ttf2Q5NC05 1138 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Cdc37Q61081 379 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Rcn2Q8BP92 320 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Znrd1-asQ8R0E5 213 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Adgrl1Q80TR1 1466 aa10.27□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Tmod1P49813 359 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Naa35Q6PHQ8 725 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Micall1Q8BGT6 870 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Cep57Q8CEE0 500 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Znf830Q8R1N0 363 aaKnown RBP10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Bzw1Q9CQC6 419 aaKnown RBP10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ddx20Q9JJY4 825 aaKnown RBP10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Sept3Q9Z1S5 350 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 NalcnQ8BXR5 1738 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Polr3aB2RXC6 1390 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Camk4P08414 469 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Slc51bQ80WK2 128 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Nsmce1Q9D720 266 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Tex14Q7M6U3 1450 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Nhsl1Q8CAF4 1587 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Plxnc1Q9QZC2 1574 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ncf2O70145 525 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Wdhd1P59328 1117 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Orc2Q60862 576 aaKnown RBP10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ankib1Q6ZPS6 1085 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Me3Q8BMF3 604 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Tbx22Q8K402 517 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Rnf112Q96DY5 654 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 PlgrktQ9D3P8 147 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 IydQ9DCX8 285 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Prdm2A2A7B5 1709 aaKnown RBP10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Rtl9Q32KG4 1339 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Zfp213E9QAW0 468 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ect2Q07139 913 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Nr1d1Q3UV55 615 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ccdc25Q78PG9 208 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Cep55Q8BT07 462 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Kiaa2013Q91X21 634 aa10.26□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Cps1Q8C196 1500 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Scgb2b11A0A087WR49 112 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ccdc129Q14B48 1034 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ift88Q61371 824 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Zbtb3Q91X45 518 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Tmed5Q9CXE7 229 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Stx17Q9D0I4 301 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Speer3W4VSP1 261 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Frmpd2A0A140LI67 1392 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ift172Q6VH22 1749 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 CenpaO35216 134 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Xrcc6P23475 608 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 SmtnQ921U8 923 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Tab2Q99K90 693 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 AmfrQ9R049 643 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ogfod1Q3U0K8 545 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Olfm4Q3UZZ4 505 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ahcyl1Q80SW1 530 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Gpr139Q80UC8 345 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Eif4bQ8BGD9 611 aaKnown RBP10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 AidaQ8C4Q6 305 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Pak2Q8CIN4 524 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Gimap7Q8R379 293 aa10.25□□□□□ -0.77
Ctc1-201ENSMUST00000021278 MafgO54790 162 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ctnna1P26231 906 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms