RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Znf428Q8C1M2 176 aa12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Fam217aQ9D9W6 419 aa12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Gja10Q9WUS4 505 aa12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Uso1Q9Z1Z0 959 aaKnown RBP12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Stag2O35638 1231 aa12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Nlrp2Q4PLS0 1046 aaKnown RBP12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Scaf1Q5U4C3 1256 aaKnown RBP12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Stac3Q8BZ71 360 aa12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Hgh1Q8C3I8 393 aa12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Tpcn1Q9EQJ0 817 aa12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Knop1Q9Z2Q2 478 aaKnown RBP12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Rbm26Q6NZN0 1012 aaKnown RBP12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Tada3Q8R0L9 432 aa12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Tc2nQ91XT6 489 aa12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Ppil4Q9CXG3 492 aaKnown RBP12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Stx17Q9D0I4 301 aa12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Ptpn23Q6PB44 1692 aa12.89□□□□□ -0.35
Herc4-201ENSMUST00000020258 Casp12O08736 419 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Gga3Q8BMI3 718 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Mylk2Q8VCR8 613 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Tgs1Q923W1 853 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Sgpp1Q9JI99 430 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Copb1Q9JIF7 953 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Atp1b3P97370 278 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Mum1l1Q4VA55 681 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Ctr9Q62018 1173 aaKnown RBP12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Lrrc41Q8K1C9 807 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Cacnb1Q8R3Z5 597 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Ccdc105Q9D4K7 499 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Cyp3a25O09158 503 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Epb41l2O70318 988 aaKnown RBP12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Aak1Q3UHJ0 959 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Amigo3Q8C2S7 508 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Gtpbp4Q99ME9 634 aaKnown RBP12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Gm5934D3Z4U6 212 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Cdh15P33146 784 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Nr5a1P33242 462 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Gfpt1P47856 697 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Krt86P97861 486 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Armc2Q3URY6 854 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Mtss1lQ6P9S0 715 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Sval3Q76I99 144 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Slitrk3Q810B9 980 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Asic2Q925H0 512 aa12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Orc1Q9Z1N2 840 aaKnown RBP12.88□□□□□ -0.35
Herc4-201ENSMUST00000020258 Igsf9bE9PZ19 1328 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Acad12D3Z7X0 555 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Zfp597E9Q6S0 419 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Meis3P97368 378 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 MmeQ61391 750 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Krit1Q6S5J6 736 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Kdm1aQ6ZQ88 853 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Tmem87aQ8BXN9 555 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Spice1Q8C804 860 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Paf1Q8K2T8 535 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 UvssaQ9D479 717 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Nme9A0A1L1SUL6 329 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Tcp10bE9PYJ0 438 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Nfxl1E9Q8I7 918 aaKnown RBP12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Bnip3O55003 187 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Rps8P62242 208 aaKnown RBP12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Cep131Q62036 1060 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Gja3Q64448 417 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Prpf40bQ80W14 870 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Nfat5Q9WV30 1534 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Ddx23D3Z0M9 819 aaKnown RBP12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Samd15F6XZJ7 620 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Slurp2P0DP59 97 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 VrtnQ3SYK4 740 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Arglu1Q3UL36 271 aaKnown RBP12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Pls1Q3V0K9 630 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Cfap100Q80VN0 613 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Gpt2Q8BGT5 522 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Epha10Q8BYG9 1007 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Stag1Q9D3E6 1258 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 RabggtaQ9JHK4 567 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 Cbx8Q9QXV1 362 aa12.87□□□□□ -0.35
Herc4-201ENSMUST00000020258 DgkiD3YWQ0 1071 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Gm10378F6XQQ1 160 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Kif1bpQ6ZPU9 617 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Anks1bQ8BIZ1 1259 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Cc2d1bQ8BRN9 848 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Sirt2Q8VDQ8 389 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Hps4Q99KG7 671 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Filip1Q9CS72 1211 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Dydc1Q9D9T0 175 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Q3TYL0 343 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 TxlnaQ6PAM1 554 aaKnown RBP12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Olfr119Q7TRJ5 321 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Mfap3lQ9D3X9 409 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Cwc15Q9JHS9 229 aaKnown RBP12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Gm43738A0A0G2JEA5 862 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Fbxl16A2RT62 479 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Atp8b5A3FIN4 1183 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Hdhd2Q3UGR5 259 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Ttll4Q80UG8 1193 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Epn1Q80VP1 575 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Cdc23Q8BGZ4 597 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Pkd2l2Q9JLG4 621 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Trp53inp1Q9QXE4 239 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms