RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Arhgef2Q60875 985 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Ccdc122Q8BVN0 290 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 NpcdF8VQB8 469 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Trim34bJ3QNR8 485 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Pip4k2aO70172 405 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 ZyxQ62523 564 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Calcoco1Q8CGU1 691 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Fermt3Q8K1B8 665 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Nup133Q8R0G9 1155 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Txndc5Q91W90 417 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Itga2bQ9QUM0 1033 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 HmmrQ00547 794 aaKnown RBP20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 EsrrbQ61539 433 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Rbm12b2Q66JV4 834 aaKnown RBP20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Sash3Q8K352 380 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Eps8l2Q99K30 729 aa20.87■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Tspyl3Q3UYP3 334 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Olfr121Q5CZY0 321 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Gja3Q64448 417 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Tas2r124Q7M718 309 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Ttc26Q8BS45 554 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Fam161bQ8CB59 589 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Saal1Q9D2C2 474 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Med1Q925J9 1575 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Pard3Q99NH2 1333 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Kif23E9Q5G3 953 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Dnm2P39054 870 aaKnown RBP20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Ezh2Q61188 746 aaKnown RBP20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 NenfQ9CQ45 171 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Krtap5-3Q9D226 196 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Ahnak2E9PYB0 1738 aaKnown RBP20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Dnai2A2AC93 623 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Ehmt1Q5DW34 1296 aa20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Ftsj3Q9DBE9 838 aaKnown RBP20.86■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Abcc10Q8R4P9 1501 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Scgb2b18A0A087WPA9 112 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 MthfslL7N466 203 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 CalrP14211 416 aaKnown RBP20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Kiaa1468Q148V7 1216 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Rnf41Q8BH75 317 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 LpxnQ99N69 386 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Gkap1Q9JMB0 366 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Ubr1O70481 1757 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Q32P12 615 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Sco1Q5SUC9 284 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Ublcp1Q8BGR9 318 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 GopcQ8BH60 463 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 F13a1Q8BH61 732 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Paf1Q8K2T8 535 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Ndufb9Q9CQJ8 179 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Fam89aQ14BJ1 175 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Ccdc33Q3ULW6 985 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Abtb2Q7TQI7 1024 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Sptlc3Q8BG54 563 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Stx17Q9D0I4 301 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 ToporslQ9D2F8 683 aa20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Knop1Q9Z2Q2 478 aaKnown RBP20.85■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Tmem2Q5FWI3 1383 aa20.84■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Ankrd35E9Q9D8 996 aa20.84■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Gucy1b3O54865 620 aa20.84■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Tsnaxip1Q99P25 704 aa20.84■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Foxo3Q9WVH4 672 aa20.84■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Prr16A3KMN5 304 aa20.84■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Atp6v1aP50516 617 aaKnown RBP20.84■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Setdb1O88974 1307 aa20.84■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Kdm3aQ6PCM1 1323 aa20.84■□□□□ 0.93
Ubp1-201ENSMUST00000009885 DgkiD3YWQ0 1071 aa20.83■□□□□ 0.93
Ubp1-201ENSMUST00000009885 IntuQ059U7 942 aa20.83■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Q8C5C9 218 aa20.83■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Smco2Q9DA21 347 aa20.83■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Rreb1Q3UH06 1700 aaKnown RBP20.83■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Hnrnph1O35737 449 aaKnown RBP20.83■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Ssrp1Q08943 708 aaKnown RBP20.83■□□□□ 0.93
Ubp1-201ENSMUST00000009885 NeblQ0II04 452 aa20.83■□□□□ 0.93
Ubp1-201ENSMUST00000009885 ErmnQ5EBJ4 281 aa20.83■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Otop3Q80UF9 577 aa20.83■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Slitrk3Q810B9 980 aa20.83■□□□□ 0.93
Ubp1-201ENSMUST00000009885 Apopt1Q9CQW7 192 aa20.83■□□□□ 0.93
Ubp1-201ENSMUST00000009885 VimP20152 466 aaKnown RBP20.83■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Ciao1Q99KN2 339 aa20.83■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Sept14Q9DA97 430 aa20.83■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Zbtb7aO88939 569 aaKnown RBP20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Prl3d1P18121 224 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Asic1Q6NXK8 526 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Nip7Q9CXK8 180 aaKnown RBP20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 EhhadhQ9DBM2 718 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 MycnP03966 462 aaKnown RBP20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Ccdc157Q5SPX1 718 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Foxd1Q61345 456 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Mcm7Q61881 719 aaKnown RBP20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Hps6Q8BLY7 805 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Tmem39aQ9CYC3 486 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 PdiltQ9DAN1 588 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Peg12Q9WVA7 283 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Sel1lQ9Z2G6 790 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Naaladl2A0A0N4SUJ3 795 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Cul4bA2A432 970 aaKnown RBP20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Zfp781Q0P5U5 243 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 SfswapQ3USH5 945 aaKnown RBP20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Kctd16Q5DTY9 427 aa20.82■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms