RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Sirt2Q8VDQ8 389 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Isca1Q9D924 129 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Cwc25Q9DBF7 416 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Stard3nlQ9DCI3 235 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Syde2E9PUP1 1314 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Scgb2b18A0A087WPA9 112 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 C2cd2E9Q3C1 696 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Lipo1J3QME6 396 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 TsksO54887 585 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 GpiP06745 558 aaKnown RBP13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Surf6P70279 355 aaKnown RBP13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Fam160b2Q80YR2 744 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Sumf1Q8R0F3 372 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Taf6lQ8R2K4 616 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Erlin1Q91X78 346 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Lmbr1Q9JIT0 490 aa13.58□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Col20a1Q923P0 1320 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Lrrc4bP0C192 709 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Kcna3P16390 528 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Hspa2P17156 633 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Nap1l1P28656 391 aaKnown RBP13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Psen1P49769 467 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Tcp11Q01755 566 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Zbtb38Q3LR78 1197 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Plekhf1Q3TB82 279 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Sema4bQ62179 823 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Sh3gl2Q62420 352 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Ltv1Q6NSQ7 470 aaKnown RBP13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Smarca1Q6PGB8 1046 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Slc44a1Q6X893 653 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Erlin2Q8BFZ9 340 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Traf3ip3Q8C0G2 513 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Zswim4Q8C7B8 1101 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 DymQ8CHY3 669 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Krt84Q99M73 603 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Sar1bQ9CQC9 198 aa13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Hic2Q9JLZ6 619 aaKnown RBP13.57□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Gm10134F6ZQC6 126 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Sema3fO88632 785 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Tpp1O89023 562 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Ift122Q6NWV3 1182 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Gga2Q6P5E6 603 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Pabpc4Q6PHQ9 660 aaKnown RBP13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Q8C5C9 218 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Ppm1fQ8CGA0 452 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Col23a1Q8K4G2 532 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Klc4Q9DBS5 619 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Kcnq5Q9JK45 933 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Pcdhb9E9Q5G2 828 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Dnm2P39054 870 aaKnown RBP13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Psmb7P70195 277 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Tex11Q14AT2 947 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Pex1Q5BL07 1284 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Slc30a9Q5IRJ6 567 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 WhrnQ80VW5 918 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Prpf40bQ80W14 870 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Csrnp2Q8BGQ2 534 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Apol10aQ8CCA5 318 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Spata4Q8K3V1 295 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Znrd1-asQ8R0E5 213 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Flad1Q8R123 492 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Six6os1Q9CTN5 574 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Mtfr1lQ9CWE0 289 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Thap2Q9D305 217 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Copb1Q9JIF7 953 aa13.56□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Scgb2b11A0A087WR49 112 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Tbc1d8bA3KGB4 1114 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 E9QMW4 1145 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Serpinb6Q60854 378 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Irak1Q62406 710 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Hirip3Q8BLH7 601 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Bpifb6Q8BU51 449 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 AopepQ8BXQ6 817 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Ccdc186Q8C9S4 917 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Phc3Q8CHP6 981 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Mmgt1Q8K273 131 aaKnown RBP13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Lrrc42Q8R2U7 421 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Lrrc2Q8VDB8 371 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Ube3bQ9ES34 1070 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Dnajc7Q9QYI3 494 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Pdcd6ipQ9WU78 869 aaKnown RBP13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 FAM186AQ9D9R9 1790 aa13.55□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Hnrnph2P70333 449 aaKnown RBP13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Atp8a2P98200 1148 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Ddr1Q03146 911 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Plekha7Q3UIL6 1118 aaKnown RBP13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 NntQ61941 1086 aaKnown RBP13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Leng8Q8CBY3 785 aaKnown RBP13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 P3h4Q8K2B0 443 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Efcab2Q9CQ46 164 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 SetQ9EQU5 289 aaKnown RBP13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Sept3Q9Z1S5 350 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Dnai2A2AC93 623 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Cyp26c1B2RXA7 518 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Hnrnph1O35737 449 aaKnown RBP13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 ByslO54825 436 aaKnown RBP13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 PparaP23204 468 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Rad23bP54728 416 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Ccdc33Q3ULW6 985 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Prom2Q3UUY6 835 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms