RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	LAM1	P38851	1228 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	NMD3	P38861	518 aa	Known RBP	6.95	□□□□□ -1.3
SNT309	YPR101W	YHR182W	P38870	785 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	NPT1	P39683	429 aa	Known RBP	6.95	□□□□□ -1.3
SNT309	YPR101W	YER186C	P40101	306 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	AIM20	P40451	204 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	RSC8	P43609	557 aa	Known RBP	6.95	□□□□□ -1.3
SNT309	YPR101W	PFD1	P46988	109 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	BNA3	P47039	444 aa	Known RBP	6.95	□□□□□ -1.3
SNT309	YPR101W	EMC2	P47133	292 aa	Known RBP	6.95	□□□□□ -1.3
SNT309	YPR101W	YGR127W	P53275	312 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	NAN1	Q02931	896 aa	Known RBP	6.95	□□□□□ -1.3
SNT309	YPR101W	SRL4	Q03085	281 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	SKY1	Q03656	742 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	RAD30	Q04049	632 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	CDD1	Q06549	142 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	NSL1	Q12143	216 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	ATG34	Q12292	412 aa		6.95	□□□□□ -1.3
SNT309	YPR101W	CMR1	Q12510	522 aa	Known RBP	6.95	□□□□□ -1.3
SNT309	YPR101W	SUI3	P09064	285 aa	Known RBP	6.94	□□□□□ -1.3
SNT309	YPR101W	SEC15	P22224	910 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	CLB2	P24869	491 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	GDA1	P32621	518 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	RGT1	P32862	1170 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	SEC66	P33754	206 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.94	□□□□□ -1.3	not detected
SNT309	YPR101W	FAA2	P39518	744 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	PRM9	P39551	298 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	YHB1	P39676	399 aa	Known RBP	6.94	□□□□□ -1.3
SNT309	YPR101W	IES5	P40060	125 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	MAF1	P41910	395 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	SHE4	P51534	789 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	ALT2	P52892	507 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	GET1	P53192	235 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	SLM2	P53955	656 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	SKI8	Q02793	397 aa	Predicted RBP	6.94	□□□□□ -1.3
SNT309	YPR101W	MUB1	Q03162	620 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	YMR155W	Q03795	547 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	TIF35	Q04067	274 aa	Known RBP	6.94	□□□□□ -1.3
SNT309	YPR101W	NHX1	Q04121	633 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	YMR226C	Q05016	267 aa	Known RBP	6.94	□□□□□ -1.3
SNT309	YPR101W	CDA1	Q06702	301 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	AAD4	Q07747	329 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	SLD7	Q08457	257 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	YDR461C-A	Q2V2P7	80 aa		6.94	□□□□□ -1.3
SNT309	YPR101W	ATP6	P00854	259 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	MAS2	P11914	482 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	NMT1	P14743	455 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	AFT1	P22149	690 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	CLB3	P24870	427 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	ADY2	P25613	283 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	GAC1	P28006	793 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	GCD11	P32481	527 aa	Known RBP	6.93	□□□□□ -1.3
SNT309	YPR101W	KAR9	P32526	644 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	HSP78	P33416	811 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	SPC42	P36094	363 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	GRS1	P38088	690 aa	Known RBP	6.93	□□□□□ -1.3
SNT309	YPR101W	FLR1	P38124	548 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	FES1	P38260	290 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	MGS1	P40151	587 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	IMA1	P53051	589 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	DSL1	P53847	754 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	YNL010W	P53981	241 aa	Known RBP	6.93	□□□□□ -1.3
SNT309	YPR101W	MET14	Q02196	202 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	RLI1	Q03195	608 aa	Known RBP	6.93	□□□□□ -1.3
SNT309	YPR101W	HPT1	Q04178	221 aa	Known RBP	6.93	□□□□□ -1.3
SNT309	YPR101W	HSP31	Q04432	237 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	GLO2	Q05584	274 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	GMC2	Q06201	188 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	SEC10	Q06245	871 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	RRP15	Q06511	250 aa	Predicted RBP	6.93	□□□□□ -1.3
SNT309	YPR101W	HDA3	Q06623	655 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	MET7	Q08645	548 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	MUM3	Q08750	479 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	YOR342C	Q12182	319 aa		6.93	□□□□□ -1.3
SNT309	YPR101W	MSS18	P08593	268 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	SNF4	P12904	322 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	POX1	P13711	748 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	6.92	□□□□□ -1.3	not detected
SNT309	YPR101W	SPB1	P25582	841 aa	Predicted RBP	6.92	□□□□□ -1.3
SNT309	YPR101W	RAD16	P31244	790 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	MSS51	P32335	436 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	AIM26	P32858	118 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	UTP11	P34247	250 aa	Predicted RBP	6.92	□□□□□ -1.3
SNT309	YPR101W	MDJ1	P35191	511 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	KAP104	P38217	918 aa	Known RBP	6.92	□□□□□ -1.3
SNT309	YPR101W	SHE3	P38272	425 aa	Known RBP	6.92	□□□□□ -1.3
SNT309	YPR101W	GOS1	P38736	223 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	PNT1	P38969	423 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	PIK1	P39104	1066 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	YJR061W	P40355	935 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	ATM1	P40416	690 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	AGP3	P43548	558 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	AIF1	P52923	378 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	YGR054W	P53235	642 aa	Known RBP	6.92	□□□□□ -1.3
SNT309	YPR101W	KTR6	P54070	446 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	REX2	P54964	269 aa	Known RBP	6.92	□□□□□ -1.3
SNT309	YPR101W	YKR005C	Q02203	525 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	YDR239C	Q03780	787 aa		6.92	□□□□□ -1.3
SNT309	YPR101W	CSN9	Q03981	162 aa		6.92	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms