RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W YLL032CQ07834 825 aaKnown RBP RIP-Chip data10.36□□□□□ -0.75not detected
MSF1YPR047W BRR2P32639 2163 aaKnown RBP10.36□□□□□ -0.75
MSF1YPR047W TEC1P18412 486 aa10.35□□□□□ -0.75
MSF1YPR047W CLN1P20437 546 aa10.35□□□□□ -0.75
MSF1YPR047W EMC1P25574 760 aa10.35□□□□□ -0.75
MSF1YPR047W RPH1P39956 796 aa10.35□□□□□ -0.75
MSF1YPR047W ALF1P53904 254 aa10.35□□□□□ -0.75
MSF1YPR047W SIW14P53965 281 aa10.35□□□□□ -0.75
MSF1YPR047W YDR444WQ04093 687 aa10.35□□□□□ -0.75
MSF1YPR047W ARG7Q04728 441 aa10.35□□□□□ -0.75
MSF1YPR047W FAP7Q12055 197 aaPredicted RBP10.35□□□□□ -0.75
MSF1YPR047W MRPL32P25348 183 aa10.34□□□□□ -0.75
MSF1YPR047W PCH2P38126 564 aa10.34□□□□□ -0.75
MSF1YPR047W EFM4P40516 257 aa10.34□□□□□ -0.75
MSF1YPR047W SAP4P53036 818 aa10.34□□□□□ -0.75
MSF1YPR047W GSF2Q04697 403 aaKnown RBP10.34□□□□□ -0.75
MSF1YPR047W HBT1Q07653 1046 aaKnown RBP10.34□□□□□ -0.75
MSF1YPR047W GAL4P04386 881 aa10.33□□□□□ -0.76
MSF1YPR047W PUF4P25339 888 aaKnown RBP RIP-Chip data10.33□□□□□ -0.76not detected
MSF1YPR047W UTR2P32623 467 aa10.33□□□□□ -0.76
MSF1YPR047W YBR259WP38338 688 aa10.33□□□□□ -0.76
MSF1YPR047W CKB2P38930 258 aa10.33□□□□□ -0.76
MSF1YPR047W STN1P38960 494 aa10.33□□□□□ -0.76
MSF1YPR047W CCT6P39079 546 aa10.33□□□□□ -0.76
MSF1YPR047W TES1P41903 349 aaKnown RBP10.33□□□□□ -0.76
MSF1YPR047W CTK3P46963 296 aaPredicted RBP10.33□□□□□ -0.76
MSF1YPR047W HLJ1P48353 224 aa10.33□□□□□ -0.76
MSF1YPR047W TGL2P54857 326 aa10.33□□□□□ -0.76
MSF1YPR047W CTR9P89105 1077 aa10.33□□□□□ -0.76
MSF1YPR047W MET14Q02196 202 aa10.33□□□□□ -0.76
MSF1YPR047W RLI1Q03195 608 aaKnown RBP10.33□□□□□ -0.76
MSF1YPR047W CSF1Q12150 2958 aa10.33□□□□□ -0.76
MSF1YPR047W FRT1Q99332 602 aa10.33□□□□□ -0.76
MSF1YPR047W TUB1P09733 447 aaKnown RBP10.33□□□□□ -0.76
MSF1YPR047W GLN4P13188 809 aaKnown RBP10.33□□□□□ -0.76
MSF1YPR047W YSP3P25036 478 aa10.33□□□□□ -0.76
MSF1YPR047W YGL108CP53139 140 aa10.33□□□□□ -0.76
MSF1YPR047W CIA1Q05583 330 aa10.33□□□□□ -0.76
MSF1YPR047W VPS68Q12016 184 aa10.33□□□□□ -0.76
MSF1YPR047W TGL5Q12043 749 aa10.33□□□□□ -0.76
MSF1YPR047W YIL046W-AQ3E7Z4 54 aa10.33□□□□□ -0.76
MSF1YPR047W PHO11P35842 467 aa10.32□□□□□ -0.76
MSF1YPR047W MCX1P38323 520 aaPredicted RBP10.32□□□□□ -0.76
MSF1YPR047W PHO12P38693 467 aa10.32□□□□□ -0.76
MSF1YPR047W END3P39013 349 aa10.32□□□□□ -0.76
MSF1YPR047W YFR018CP43599 363 aa10.32□□□□□ -0.76
MSF1YPR047W OSW7P43611 510 aa10.32□□□□□ -0.76
MSF1YPR047W YDR132CQ03900 495 aa10.32□□□□□ -0.76
MSF1YPR047W POB3Q04636 552 aaKnown RBP10.32□□□□□ -0.76
MSF1YPR047W MCP2Q06567 569 aa10.32□□□□□ -0.76
MSF1YPR047W TRM8Q12009 286 aa10.32□□□□□ -0.76
MSF1YPR047W YPR089WO13585 888 aa10.31□□□□□ -0.76
MSF1YPR047W RED1P14291 827 aa10.31□□□□□ -0.76
MSF1YPR047W APA1P16550 321 aaKnown RBP10.31□□□□□ -0.76
MSF1YPR047W EPT1P22140 391 aa10.31□□□□□ -0.76
MSF1YPR047W PLC1P32383 869 aa10.31□□□□□ -0.76
MSF1YPR047W SPS19P32573 292 aaKnown RBP10.31□□□□□ -0.76
MSF1YPR047W SPR1P32603 445 aa10.31□□□□□ -0.76
MSF1YPR047W IML3P38265 245 aa10.31□□□□□ -0.76
MSF1YPR047W YBP1P38315 674 aa10.31□□□□□ -0.76
MSF1YPR047W RGI2P40188 164 aa10.31□□□□□ -0.76
MSF1YPR047W NUP85P46673 744 aa10.31□□□□□ -0.76
MSF1YPR047W NUP100Q02629 959 aa10.31□□□□□ -0.76
MSF1YPR047W YLR149CQ99296 730 aa10.31□□□□□ -0.76
MSF1YPR047W PPH21P23594 369 aa10.3□□□□□ -0.76
MSF1YPR047W RFA2P26754 273 aaKnown RBP10.3□□□□□ -0.76
MSF1YPR047W CWP1P28319 239 aa10.3□□□□□ -0.76
MSF1YPR047W SRB4P32569 687 aa10.3□□□□□ -0.76
MSF1YPR047W CTF13P35203 478 aa10.3□□□□□ -0.76
MSF1YPR047W TIM17P39515 158 aa10.3□□□□□ -0.76
MSF1YPR047W SEC9P40357 651 aa10.3□□□□□ -0.76
MSF1YPR047W ESC2Q06340 456 aa10.3□□□□□ -0.76
MSF1YPR047W ABF1P14164 731 aa10.29□□□□□ -0.76
MSF1YPR047W CKI1P20485 582 aa10.29□□□□□ -0.76
MSF1YPR047W NDI1P32340 513 aa10.29□□□□□ -0.76
MSF1YPR047W STO1P34160 861 aaKnown RBP10.29□□□□□ -0.76
MSF1YPR047W SLX8P40072 274 aa10.29□□□□□ -0.76
MSF1YPR047W BIR1P47134 954 aa10.29□□□□□ -0.76
MSF1YPR047W YPR003CP53394 754 aa10.29□□□□□ -0.76
MSF1YPR047W FRE4P53746 719 aa10.29□□□□□ -0.76
MSF1YPR047W EFM6P53970 246 aa10.29□□□□□ -0.76
MSF1YPR047W EMI1Q04406 187 aa10.29□□□□□ -0.76
MSF1YPR047W YMR114CQ04471 368 aaKnown RBP10.29□□□□□ -0.76
MSF1YPR047W PLB3Q08108 686 aa10.29□□□□□ -0.76
MSF1YPR047W SMF3Q12078 473 aaPredicted RBP10.29□□□□□ -0.76
MSF1YPR047W STE4P18851 423 aa10.28□□□□□ -0.76
MSF1YPR047W HEM12P32347 362 aaPredicted RBP10.28□□□□□ -0.76
MSF1YPR047W IMP3P32899 183 aaPredicted RBP10.28□□□□□ -0.76
MSF1YPR047W CYC2P38909 366 aa10.28□□□□□ -0.76
MSF1YPR047W YMR134WP40207 237 aa10.28□□□□□ -0.76
MSF1YPR047W LDB17Q12342 491 aa10.28□□□□□ -0.76
MSF1YPR047W AVL9Q12500 764 aa10.28□□□□□ -0.76
MSF1YPR047W SCL1P21243 252 aaKnown RBP10.27□□□□□ -0.77
MSF1YPR047W DAL82P21705 255 aa10.27□□□□□ -0.77
MSF1YPR047W GMH1P36125 273 aa10.27□□□□□ -0.77
MSF1YPR047W DBP8P38719 431 aa10.27□□□□□ -0.77
MSF1YPR047W PCL5P38794 229 aa10.27□□□□□ -0.77
MSF1YPR047W SLU7Q02775 382 aaKnown RBP10.27□□□□□ -0.77
MSF1YPR047W ARX1Q03862 593 aaKnown RBP10.27□□□□□ -0.77
MSF1YPR047W BUD7Q08754 746 aa10.27□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms