RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	AI5_ALPHA	Q9ZZX1	630 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	CBP2	P03874	630 aa	Predicted RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	GAL1	P04385	528 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	SNF1	P06782	633 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	CBP6	P07253	162 aa	Predicted RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	COR1	P07256	457 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	ILV2	P07342	687 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	TUB1	P09733	447 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	HOM2	P13663	365 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	NCP1	P16603	691 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	RGP1	P16664	663 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	RGR1	P19263	1082 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	CLN2	P20438	545 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	PRI2	P20457	528 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	RNR3	P21672	869 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	AEP2	P22136	580 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	RIT1	P23796	513 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	RSC6	P25632	483 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	CMK1	P27466	446 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	KTR1	P27810	393 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	KIP2	P28743	706 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	CCR4	P31384	837 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	DBF20	P32328	564 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	HBS1	P32769	611 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	CDC13	P32797	924 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	CYM1	P32898	989 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	PPQ1	P32945	549 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	KTR2	P33550	425 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	TOM20	P35180	183 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	MAE1	P36013	669 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	ANR2	P36090	516 aa	Predicted RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	MRPL7	P36519	292 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	YBL028C	P38202	106 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	POP7	P38291	140 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	COS111	P38308	924 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	TSC10	P38342	320 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	MSR1	P38714	643 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	YHL050C	P38721	697 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	MNN9	P39107	395 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	SEO1	P39709	593 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	AIM2	P39721	246 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	SSP120	P39931	234 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	SAH1	P39954	449 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	GID8	P40208	455 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	HPM1	P40481	377 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	YIL089W	P40500	205 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	SEC28	P40509	296 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	MAM33	P40513	266 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	FET4	P40988	552 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	RPC17	P47076	161 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	YGR153W	P48238	217 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	NIT3	P49954	291 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	PRP24	P49960	444 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	DIE2	P50076	525 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	ARO8	P53090	500 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	YGR111W	P53265	400 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	LSC2	P53312	427 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	RET3	P53600	189 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	MNT4	P53745	580 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	ASI2	P53895	289 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	DID2	P69771	204 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	RPL6A	Q02326	176 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	UBP16	Q02863	499 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	EEB1	Q02891	456 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	YMR279C	Q03263	540 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	EBS1	Q03466	884 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	YDR249C	Q03787	373 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	YDR514C	Q04408	483 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	SPC2	Q04969	178 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	PEX10	Q05568	337 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	CRR1	Q05790	422 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	VTA1	Q06263	330 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	MHR1	Q06630	226 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	YPD1	Q07688	167 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	LOT6	Q07923	191 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	SSP2	Q08646	371 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	HRK1	Q08732	759 aa	Known RBP	2.67	□□□□□ -1.98
LCL1	YPL056C	TAH18	Q12181	623 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	HER1	Q12276	1246 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	DGK1	Q12382	290 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	YOR131C	Q12486	218 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	CMC2	Q3E7A4	109 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	LAG2	Q92325	660 aa		2.67	□□□□□ -1.98
LCL1	YPL056C	HIS4	P00815	799 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	RPL25	P04456	142 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	ARG81	P05085	880 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	NFT1	P0CE68	1218 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	ERG11	P10614	530 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	HOM3	P10869	527 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	LAT1	P12695	482 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	PEP5	P12868	1029 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	CAF20	P12962	161 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	ARG8	P18544	423 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	GAP1	P19145	602 aa	Predicted RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	EXO70	P19658	623 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	VPS33	P20795	691 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	KGD1	P20967	1014 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	CBP3	P21560	335 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	DIT2	P21595	489 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	VMA16	P23968	213 aa		2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms