RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C RAD3P06839 778 aa8.08□□□□□ -1.12
LSP1YPL004C RBK1P25332 333 aa8.08□□□□□ -1.12
LSP1YPL004C CDC20P26309 610 aa8.08□□□□□ -1.12
LSP1YPL004C BRF1P29056 596 aa8.08□□□□□ -1.12
LSP1YPL004C TPS2P31688 896 aaKnown RBP8.08□□□□□ -1.12
LSP1YPL004C NDI1P32340 513 aa8.08□□□□□ -1.12
LSP1YPL004C PLC1P32383 869 aa8.08□□□□□ -1.12
LSP1YPL004C SMI1P32566 505 aa8.08□□□□□ -1.12
LSP1YPL004C LAS1P36146 502 aaPredicted RBP8.08□□□□□ -1.12
LSP1YPL004C PCF11P39081 626 aaPredicted RBP8.08□□□□□ -1.12
LSP1YPL004C INA22P40576 216 aa8.08□□□□□ -1.12
LSP1YPL004C COG7P53195 279 aa8.08□□□□□ -1.12
LSP1YPL004C NOP15P53927 220 aaPredicted RBP8.08□□□□□ -1.12
LSP1YPL004C AQR1P53943 586 aa8.08□□□□□ -1.12
LSP1YPL004C YNL035CP53962 389 aaKnown RBP8.08□□□□□ -1.12
LSP1YPL004C NUP100Q02629 959 aa8.08□□□□□ -1.12
LSP1YPL004C SLU7Q02775 382 aaKnown RBP8.08□□□□□ -1.12
LSP1YPL004C SAM4Q08985 325 aaKnown RBP8.08□□□□□ -1.12
LSP1YPL004C YLR149CQ99296 730 aa8.08□□□□□ -1.12
LSP1YPL004C FRT1Q99332 602 aa8.08□□□□□ -1.12
LSP1YPL004C HSP60P19882 572 aaKnown RBP8.07□□□□□ -1.12
LSP1YPL004C CHL1P22516 861 aaPredicted RBP8.07□□□□□ -1.12
LSP1YPL004C YSP3P25036 478 aa8.07□□□□□ -1.12
LSP1YPL004C DCC1P25559 380 aa8.07□□□□□ -1.12
LSP1YPL004C EMC1P25574 760 aa8.07□□□□□ -1.12
LSP1YPL004C URA7P28274 579 aaKnown RBP8.07□□□□□ -1.12
LSP1YPL004C IRS4P36115 615 aaKnown RBP8.07□□□□□ -1.12
LSP1YPL004C RPH1P39956 796 aa8.07□□□□□ -1.12
LSP1YPL004C SAP4P53036 818 aa8.07□□□□□ -1.12
LSP1YPL004C CPR6P53691 371 aaKnown RBP8.07□□□□□ -1.12
LSP1YPL004C COG6P53959 839 aa8.07□□□□□ -1.12
LSP1YPL004C YDR132CQ03900 495 aa8.07□□□□□ -1.12
LSP1YPL004C RRB1Q04225 511 aaKnown RBP8.07□□□□□ -1.12
LSP1YPL004C CUE5Q08412 411 aaKnown RBP8.07□□□□□ -1.12
LSP1YPL004C LDB17Q12342 491 aa8.07□□□□□ -1.12
LSP1YPL004C POL2P21951 2222 aaKnown RBP8.06□□□□□ -1.12
LSP1YPL004C CMD1P06787 147 aaKnown RBP8.06□□□□□ -1.12
LSP1YPL004C HEM15P16622 393 aa8.06□□□□□ -1.12
LSP1YPL004C RPO26P20435 155 aa8.06□□□□□ -1.12
LSP1YPL004C RML2P32611 393 aa8.06□□□□□ -1.12
LSP1YPL004C PEX5P35056 612 aa8.06□□□□□ -1.12
LSP1YPL004C CTF13P35203 478 aa8.06□□□□□ -1.12
LSP1YPL004C WSC4P38739 605 aa8.06□□□□□ -1.12
LSP1YPL004C LRP1P38801 184 aaKnown RBP8.06□□□□□ -1.12
LSP1YPL004C BAT1P38891 393 aaKnown RBP8.06□□□□□ -1.12
LSP1YPL004C SEO1P39709 593 aa8.06□□□□□ -1.12
LSP1YPL004C RGI2P40188 164 aa8.06□□□□□ -1.12
LSP1YPL004C ATG36P46983 293 aa8.06□□□□□ -1.12
LSP1YPL004C CSN12P47130 423 aa8.06□□□□□ -1.12
LSP1YPL004C YNL143CP53908 130 aa8.06□□□□□ -1.12
LSP1YPL004C HOS3Q02959 697 aaKnown RBP8.06□□□□□ -1.12
LSP1YPL004C RPC11Q04307 110 aaPredicted RBP8.06□□□□□ -1.12
LSP1YPL004C YMR027WQ04371 470 aa8.06□□□□□ -1.12
LSP1YPL004C GSF2Q04697 403 aaKnown RBP8.06□□□□□ -1.12
LSP1YPL004C HEL2Q05580 639 aaKnown RBP8.06□□□□□ -1.12
LSP1YPL004C MCP2Q06567 569 aa8.06□□□□□ -1.12
LSP1YPL004C SLD7Q08457 257 aa8.06□□□□□ -1.12
LSP1YPL004C TOR1P35169 2470 aa8.06□□□□□ -1.12
LSP1YPL004C CAN1P04817 590 aa8.05□□□□□ -1.12
LSP1YPL004C YCL068CP25593 260 aa8.05□□□□□ -1.12
LSP1YPL004C PHO11P35842 467 aa8.05□□□□□ -1.12
LSP1YPL004C YKL151CP36059 337 aa8.05□□□□□ -1.12
LSP1YPL004C SRX1P36077 127 aa8.05□□□□□ -1.12
LSP1YPL004C PHO12P38693 467 aa8.05□□□□□ -1.12
LSP1YPL004C TES1P41903 349 aaKnown RBP8.05□□□□□ -1.12
LSP1YPL004C MTO1P53070 669 aa8.05□□□□□ -1.12
LSP1YPL004C VAC7P53950 1165 aa8.05□□□□□ -1.12
LSP1YPL004C EFM6P53970 246 aa8.05□□□□□ -1.12
LSP1YPL004C HBT1Q07653 1046 aaKnown RBP8.05□□□□□ -1.12
LSP1YPL004C BUD20Q08004 166 aaPredicted RBP8.05□□□□□ -1.12
LSP1YPL004C OPI10Q08202 246 aa8.05□□□□□ -1.12
LSP1YPL004C Q0182Q9ZZW1 134 aa8.05□□□□□ -1.12
LSP1YPL004C ILS1P09436 1072 aaKnown RBP8.04□□□□□ -1.12
LSP1YPL004C INO1P11986 533 aa8.04□□□□□ -1.12
LSP1YPL004C UBA1P22515 1024 aaKnown RBP8.04□□□□□ -1.12
LSP1YPL004C URA10P30402 227 aa8.04□□□□□ -1.12
LSP1YPL004C IMP3P32899 183 aaPredicted RBP8.04□□□□□ -1.12
LSP1YPL004C RPC37P36121 282 aa8.04□□□□□ -1.12
LSP1YPL004C SPP381P38282 291 aaPredicted RBP8.04□□□□□ -1.12
LSP1YPL004C STN1P38960 494 aa8.04□□□□□ -1.12
LSP1YPL004C PXA1P41909 870 aa8.04□□□□□ -1.12
LSP1YPL004C YFL012WP43580 148 aa8.04□□□□□ -1.12
LSP1YPL004C COQ5P49017 307 aa8.04□□□□□ -1.12
LSP1YPL004C TRS31Q03337 283 aa8.04□□□□□ -1.12
LSP1YPL004C ADY3Q07732 790 aa8.04□□□□□ -1.12
LSP1YPL004C GNT1Q12096 491 aa8.04□□□□□ -1.12
LSP1YPL004C MPH2P0CD99 609 aa8.03□□□□□ -1.12
LSP1YPL004C APA1P16550 321 aaKnown RBP8.03□□□□□ -1.12
LSP1YPL004C GAL11P19659 1081 aa8.03□□□□□ -1.12
LSP1YPL004C SLD2P34252 453 aa8.03□□□□□ -1.12
LSP1YPL004C MRP21P38175 177 aa8.03□□□□□ -1.12
LSP1YPL004C GND1P38720 489 aaKnown RBP8.03□□□□□ -1.12
LSP1YPL004C SLX8P40072 274 aa8.03□□□□□ -1.12
LSP1YPL004C TFB2Q02939 513 aa8.03□□□□□ -1.12
LSP1YPL004C NHX1Q04121 633 aa8.03□□□□□ -1.12
LSP1YPL004C ADE13Q05911 482 aaKnown RBP8.03□□□□□ -1.12
LSP1YPL004C RMD5Q12508 421 aa8.03□□□□□ -1.12
LSP1YPL004C TEF1P02994 458 aaKnown RBP8.02□□□□□ -1.13
LSP1YPL004C ADH4P10127 382 aa8.02□□□□□ -1.13
LSP1YPL004C GUT2P32191 649 aa8.02□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms