RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	RED1	P14291	827 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	CDC43	P18898	376 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	LRE1	P25579	583 aa	Known RBP	4.05	□□□□□ -1.76
CAF20	YOR276W	SIP1	P32578	815 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	PPZ2	P33329	710 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	LOT5	P34234	306 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	MTG2	P38860	518 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	RTS1	P38903	757 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	NDC80	P40460	691 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	AAD10	P47182	288 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	PIL1	P53252	339 aa	Known RBP	4.05	□□□□□ -1.76
CAF20	YOR276W	SPC98	P53540	846 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	YNR061C	P53747	219 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	VPS75	P53853	264 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	INN1	P53901	409 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	SMX3	P54999	86 aa	Predicted RBP	4.05	□□□□□ -1.76
CAF20	YOR276W	UBP16	Q02863	499 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	GTB1	Q04924	702 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	RIX7	Q07844	837 aa	Known RBP	4.05	□□□□□ -1.76
CAF20	YOR276W	TGS1	Q12052	315 aa		4.05	□□□□□ -1.76
CAF20	YOR276W	LYS21	Q12122	440 aa	Known RBP	4.05	□□□□□ -1.76
CAF20	YOR276W	HOM3	P10869	527 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	CKA1	P15790	372 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	AMD2	P22580	549 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	POL4	P25615	582 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	PEX2	P32800	271 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	TFC3	P34111	1160 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	GMH1	P36125	273 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	YPT10	P38146	199 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	RKM3	P38222	552 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	RIX1	P38883	763 aa	Predicted RBP	4.04	□□□□□ -1.76
CAF20	YOR276W	FUN12	P39730	1002 aa	Known RBP	4.04	□□□□□ -1.76
CAF20	YOR276W	SLZ1	P40167	298 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	ARG2	P40360	574 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	UBP7	P40453	1071 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	SPO22	P40511	975 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	ARF3	P40994	183 aa	RIP-Chip data	4.04	□□□□□ -1.76	not detected
CAF20	YOR276W	CIR1	P42940	261 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	CTR1	P49573	406 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	LCL3	P53153	274 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	YNL092W	P53934	400 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	MUB1	Q03162	620 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	NGL2	Q03264	515 aa	Known RBP	4.04	□□□□□ -1.76
CAF20	YOR276W	YDR179W-A	Q03983	463 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	SPN1	Q06505	410 aa	Predicted RBP	4.04	□□□□□ -1.76
CAF20	YOR276W	CTI6	Q08923	506 aa		4.04	□□□□□ -1.76
CAF20	YOR276W	NOP58	Q12499	511 aa	Known RBP	4.04	□□□□□ -1.76
CAF20	YOR276W	CET1	O13297	549 aa	Predicted RBP	4.03	□□□□□ -1.76
CAF20	YOR276W	COX1	P00401	534 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	TUB1	P09733	447 aa	Known RBP	4.03	□□□□□ -1.76
CAF20	YOR276W	KAR3	P17119	729 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	KIN3	P22209	435 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	SRB5	P32585	307 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	BYE1	P36106	594 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	MAL33	P38157	468 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	FLC2	P39719	783 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	IME4	P41833	600 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	GPD2	P41911	440 aa	Known RBP	4.03	□□□□□ -1.76
CAF20	YOR276W	YML053C	Q04978	212 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	COQ11	Q05892	277 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	MRI1	Q06489	411 aa	Known RBP	4.03	□□□□□ -1.76
CAF20	YOR276W	ATG23	Q06671	453 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	YDL242W	Q07746	117 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	BMS1	Q08965	1183 aa	Known RBP	4.03	□□□□□ -1.76
CAF20	YOR276W	RCN2	Q12044	265 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	NMD4	Q12129	218 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	AI5_ALPHA	Q9ZZX1	630 aa		4.03	□□□□□ -1.76
CAF20	YOR276W	AAC1	P04710	309 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	CBS1	P14066	229 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	RNR3	P21672	869 aa	Known RBP	4.02	□□□□□ -1.77
CAF20	YOR276W	ILV6	P25605	309 aa	Known RBP	4.02	□□□□□ -1.77
CAF20	YOR276W	VMA8	P32610	256 aa	Known RBP	4.02	□□□□□ -1.77
CAF20	YOR276W	GDA1	P32621	518 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	BLI1	P35727	113 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	GLG1	P36143	616 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	FLO10	P36170	1169 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	SRO77	P38163	1010 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	ERC1	P38767	581 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	PIH1	P38768	344 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	MAM1	P40065	302 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	YIL166C	P40445	542 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	SEC24	P40482	926 aa	Known RBP	4.02	□□□□□ -1.77
CAF20	YOR276W	UBX6	P47049	396 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	NPA3	P47122	385 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	LYS4	P49367	693 aa	Predicted RBP	4.02	□□□□□ -1.77
CAF20	YOR276W	YGL036W	P53185	909 aa	Predicted RBP	4.02	□□□□□ -1.77
CAF20	YOR276W	YMR155W	Q03795	547 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	SKG3	Q06315	1026 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	YDL073W	Q07454	984 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	CRT10	Q08226	957 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	TCO89	Q08921	799 aa		4.02	□□□□□ -1.77
CAF20	YOR276W	YBR085C-A	O43137	85 aa		4.01	□□□□□ -1.77
CAF20	YOR276W	ROX1	P25042	368 aa		4.01	□□□□□ -1.77
CAF20	YOR276W	ERG3	P32353	365 aa		4.01	□□□□□ -1.77
CAF20	YOR276W	AUR1	P36107	401 aa	Predicted RBP	4.01	□□□□□ -1.77
CAF20	YOR276W	DJP1	P40564	432 aa		4.01	□□□□□ -1.77
CAF20	YOR276W	GLO1	P50107	326 aa		4.01	□□□□□ -1.77
CAF20	YOR276W	YDR109C	Q04585	715 aa		4.01	□□□□□ -1.77
CAF20	YOR276W	CRN1	Q06440	651 aa		4.01	□□□□□ -1.77
CAF20	YOR276W	SWA2	Q06677	668 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 177.7 ms