RNA–Protein interactions for RNA: YOR042W

CUE5, Transcript of Ubiquitin-binding protein, yeast

Gene CUE5, Length 1,236 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE5	YOR042W	FAF1	P40546	346 aa	Predicted RBP	5.1	□□□□□ -1.59
CUE5	YOR042W	RPC17	P47076	161 aa		5.1	□□□□□ -1.59
CUE5	YOR042W	ECL1	P48235	211 aa		5.1	□□□□□ -1.59
CUE5	YOR042W	MAL13	P53338	473 aa		5.1	□□□□□ -1.59
CUE5	YOR042W	NOG2	P53742	486 aa	Known RBP	5.1	□□□□□ -1.59
CUE5	YOR042W	YNL034W	P53963	612 aa		5.1	□□□□□ -1.59
CUE5	YOR042W	YNL018C	P53976	612 aa		5.1	□□□□□ -1.59
CUE5	YOR042W	YOR352W	Q08816	343 aa		5.1	□□□□□ -1.59
CUE5	YOR042W	NOP14	Q99207	810 aa	Known RBP	5.1	□□□□□ -1.59
CUE5	YOR042W	CYC1	P00044	109 aa	Predicted RBP	5.09	□□□□□ -1.59
CUE5	YOR042W	GAL11	P19659	1081 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	AEP2	P22136	580 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	HSL7	P38274	827 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	SWC5	P38326	303 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	END3	P39013	349 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	AVT2	P39981	480 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	MMF1	P40185	145 aa	Known RBP	5.09	□□□□□ -1.59
CUE5	YOR042W	KHA1	P40309	873 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	CEP3	P40969	608 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	GUF1	P46943	645 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	RIM8	P53179	542 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	SNO2	P53823	222 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	HER2	Q03557	464 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	URH1	Q04179	340 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	RRB1	Q04225	511 aa	Known RBP	5.09	□□□□□ -1.59
CUE5	YOR042W	TAF9	Q05027	157 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	HRD3	Q05787	833 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	APC5	Q08683	685 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	YDL177C	Q12257	170 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	YPR071W	Q12346	211 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	ZRT2	Q12436	422 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	VPS5	Q92331	675 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	HBN1	Q96VH4	193 aa		5.09	□□□□□ -1.59
CUE5	YOR042W	CAN1	P04817	590 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	RAD10	P06838	210 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	PMS1	P14242	873 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	CMP2	P14747	604 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	SFL1	P20134	766 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	TRX1	P22217	103 aa	Known RBP	5.08	□□□□□ -1.6
CUE5	YOR042W	PEX1	P24004	1043 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	FUN30	P31380	1131 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	DSS4	P32601	143 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	BYE1	P36106	594 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	YKR051W	P36142	418 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
CUE5	YOR042W	PCA1	P38360	1216 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	GIC1	P38785	314 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	LYS9	P38999	446 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	FHL1	P39521	936 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	YIL054W	P40524	105 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	CDC1	P40986	491 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	MAF1	P41910	395 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	BFA1	P47113	574 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	VPS25	P47142	202 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	YNL247W	P53852	767 aa	Known RBP	5.08	□□□□□ -1.6
CUE5	YOR042W	ELP3	Q02908	557 aa	Known RBP	5.08	□□□□□ -1.6
CUE5	YOR042W	VTI1	Q04338	217 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	TDA9	Q04545	1251 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	ECI1	Q05871	280 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	KAP95	Q06142	861 aa	Known RBP	5.08	□□□□□ -1.6
CUE5	YOR042W	ATG23	Q06671	453 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	THI20	Q08224	551 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	CIR2	Q08822	631 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	AIM41	Q12032	185 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	RIB2	Q12362	591 aa	Known RBP	5.08	□□□□□ -1.6
CUE5	YOR042W	SFI1	Q12369	946 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	RMP1	Q12530	201 aa		5.08	□□□□□ -1.6
CUE5	YOR042W	SPE1	P08432	466 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	TUB3	P09734	445 aa	Known RBP	5.07	□□□□□ -1.6
CUE5	YOR042W	YPK1	P12688	680 aa	Known RBP	5.07	□□□□□ -1.6
CUE5	YOR042W	PDE1	P22434	369 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	SYN8	P31377	255 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	GCG1	P32656	232 aa	Known RBP	5.07	□□□□□ -1.6
CUE5	YOR042W	AFR1	P33304	620 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	CNS1	P33313	385 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	YKR078W	P36158	585 aa	Known RBP	5.07	□□□□□ -1.6
CUE5	YOR042W	MMS21	P38632	267 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	RIM4	P38741	713 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	CCT4	P39078	528 aa	Known RBP	5.07	□□□□□ -1.6
CUE5	YOR042W	YML6	P51998	286 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	YGR283C	P53336	341 aa	Predicted RBP	5.07	□□□□□ -1.6
CUE5	YOR042W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	RIP-Chip
CUE5	YOR042W	MRPL22	P53881	309 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	YNL040W	P53960	456 aa	Predicted RBP	5.07	□□□□□ -1.6
CUE5	YOR042W	CEG1	Q01159	459 aa	Predicted RBP	5.07	□□□□□ -1.6
CUE5	YOR042W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
CUE5	YOR042W	MTD1	Q02046	320 aa	Known RBP	5.07	□□□□□ -1.6
CUE5	YOR042W	MTG1	Q03151	367 aa	Predicted RBP	5.07	□□□□□ -1.6
CUE5	YOR042W	SPG3	Q04398	127 aa	Predicted RBP	5.07	□□□□□ -1.6
CUE5	YOR042W	ECM22	Q05958	814 aa	Predicted RBP	5.07	□□□□□ -1.6
CUE5	YOR042W	PIG1	Q06216	648 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	YPR196W	Q06595	470 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	XYL2	Q07993	356 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
CUE5	YOR042W	THI21	Q08975	551 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	CCH1	P50077	2039 aa		5.07	□□□□□ -1.6
CUE5	YOR042W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
CUE5	YOR042W	RPO26	P20435	155 aa		5.06	□□□□□ -1.6
CUE5	YOR042W	NPP1	P25353	742 aa		5.06	□□□□□ -1.6
CUE5	YOR042W	RAD16	P31244	790 aa		5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms