RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W LRP1P38801 184 aaKnown RBP10.72□□□□□ -0.69
PRE6YOL038W SLX8P40072 274 aa10.72□□□□□ -0.69
PRE6YOL038W SWC4P53201 476 aa10.72□□□□□ -0.69
PRE6YOL038W SIW14P53965 281 aa10.72□□□□□ -0.69
PRE6YOL038W INH1P01097 85 aa10.71□□□□□ -0.69
PRE6YOL038W RIM8P53179 542 aa10.71□□□□□ -0.69
PRE6YOL038W BOP3P53958 396 aa10.71□□□□□ -0.69
PRE6YOL038W CDC14Q00684 551 aa10.71□□□□□ -0.69
PRE6YOL038W NUP100Q02629 959 aa10.71□□□□□ -0.69
PRE6YOL038W YMR114CQ04471 368 aaKnown RBP10.71□□□□□ -0.69
PRE6YOL038W ALR1Q08269 859 aa10.71□□□□□ -0.69
PRE6YOL038W AVL9Q12500 764 aa10.71□□□□□ -0.69
PRE6YOL038W YKR104WP0CE69 306 aa10.7□□□□□ -0.7
PRE6YOL038W TEC1P18412 486 aa10.7□□□□□ -0.7
PRE6YOL038W UBA1P22515 1024 aaKnown RBP10.7□□□□□ -0.7
PRE6YOL038W RFA2P26754 273 aaKnown RBP10.7□□□□□ -0.7
PRE6YOL038W MRPL9P31334 269 aa10.7□□□□□ -0.7
PRE6YOL038W SRP101P32916 621 aa10.7□□□□□ -0.7
PRE6YOL038W GND1P38720 489 aaKnown RBP10.7□□□□□ -0.7
PRE6YOL038W UME6P39001 836 aa10.7□□□□□ -0.7
PRE6YOL038W YNL143CP53908 130 aa10.7□□□□□ -0.7
PRE6YOL038W THI73Q07904 523 aa10.7□□□□□ -0.7
PRE6YOL038W YIL046W-AQ3E7Z4 54 aa10.7□□□□□ -0.7
PRE6YOL038W GCN1P33892 2672 aaKnown RBP10.69□□□□□ -0.7
PRE6YOL038W GAL4P04386 881 aa10.69□□□□□ -0.7
PRE6YOL038W SBP1P10080 294 aaKnown RBP10.69□□□□□ -0.7
PRE6YOL038W POL30P15873 258 aaKnown RBP10.69□□□□□ -0.7
PRE6YOL038W TSR4P25040 408 aa10.69□□□□□ -0.7
PRE6YOL038W PAP1P29468 568 aaKnown RBP10.69□□□□□ -0.7
PRE6YOL038W YBR259WP38338 688 aa10.69□□□□□ -0.7
PRE6YOL038W SRP72P38688 640 aaKnown RBP10.69□□□□□ -0.7
PRE6YOL038W CKB2P38930 258 aa10.69□□□□□ -0.7
PRE6YOL038W TDA9Q04545 1251 aa10.69□□□□□ -0.7
PRE6YOL038W YLR456WQ06199 204 aa10.69□□□□□ -0.7
PRE6YOL038W SLD7Q08457 257 aa10.69□□□□□ -0.7
PRE6YOL038W RPN8Q08723 338 aaKnown RBP10.69□□□□□ -0.7
PRE6YOL038W TFB4Q12004 338 aa10.69□□□□□ -0.7
PRE6YOL038W SMF3Q12078 473 aaPredicted RBP10.69□□□□□ -0.7
PRE6YOL038W PRP8P33334 2413 aaKnown RBP10.69□□□□□ -0.7
PRE6YOL038W CKI1P20485 582 aa10.68□□□□□ -0.7
PRE6YOL038W SNT1P25357 1226 aa10.68□□□□□ -0.7
PRE6YOL038W IML3P38265 245 aa10.68□□□□□ -0.7
PRE6YOL038W MSR1P38714 643 aa10.68□□□□□ -0.7
PRE6YOL038W RPH1P39956 796 aa10.68□□□□□ -0.7
PRE6YOL038W YMR134WP40207 237 aa10.68□□□□□ -0.7
PRE6YOL038W YPR003CP53394 754 aa10.68□□□□□ -0.7
PRE6YOL038W MET14Q02196 202 aa10.68□□□□□ -0.7
PRE6YOL038W YLL032CQ07834 825 aaKnown RBP RIP-Chip data10.68□□□□□ -0.7not detected
PRE6YOL038W TRM8Q12009 286 aa10.68□□□□□ -0.7
PRE6YOL038W CDC24P11433 854 aaPredicted RBP10.67□□□□□ -0.7
PRE6YOL038W PPH21P23594 369 aa10.67□□□□□ -0.7
PRE6YOL038W EMC1P25574 760 aa10.67□□□□□ -0.7
PRE6YOL038W MSG5P38590 489 aa10.67□□□□□ -0.7
PRE6YOL038W MCP2Q06567 569 aa10.67□□□□□ -0.7
PRE6YOL038W HBT1Q07653 1046 aaKnown RBP10.67□□□□□ -0.7
PRE6YOL038W VPS68Q12016 184 aa10.67□□□□□ -0.7
PRE6YOL038W RMD5Q12508 421 aa10.67□□□□□ -0.7
PRE6YOL038W FRT1Q99332 602 aa10.67□□□□□ -0.7
PRE6YOL038W YSP3P25036 478 aa10.66□□□□□ -0.7
PRE6YOL038W GID7P25569 745 aa10.66□□□□□ -0.7
PRE6YOL038W GCD6P32501 712 aaKnown RBP10.66□□□□□ -0.7
PRE6YOL038W SPS19P32573 292 aaKnown RBP10.66□□□□□ -0.7
PRE6YOL038W PBP2P38151 413 aaKnown RBP RIP-Chip data10.66□□□□□ -0.7not detected
PRE6YOL038W MMS21P38632 267 aa10.66□□□□□ -0.7
PRE6YOL038W ELO1P39540 310 aa10.66□□□□□ -0.7
PRE6YOL038W HLJ1P48353 224 aa10.66□□□□□ -0.7
PRE6YOL038W RSC4Q02206 625 aa10.66□□□□□ -0.7
PRE6YOL038W SLU7Q02775 382 aaKnown RBP10.66□□□□□ -0.7
PRE6YOL038W MTG1Q03151 367 aaPredicted RBP10.66□□□□□ -0.7
PRE6YOL038W VAC14Q06708 880 aa10.66□□□□□ -0.7
PRE6YOL038W LDB17Q12342 491 aa10.66□□□□□ -0.7
PRE6YOL038W YPR089WO13585 888 aa10.65□□□□□ -0.7
PRE6YOL038W ERR1P0CX10 437 aa10.65□□□□□ -0.7
PRE6YOL038W ERR2P0CX11 437 aa10.65□□□□□ -0.7
PRE6YOL038W EPT1P22140 391 aa10.65□□□□□ -0.7
PRE6YOL038W PCL5P38794 229 aa10.65□□□□□ -0.7
PRE6YOL038W ERR3P42222 437 aa10.65□□□□□ -0.7
PRE6YOL038W TAH11P47112 604 aa10.65□□□□□ -0.7
PRE6YOL038W HXT16P47185 567 aa10.65□□□□□ -0.7
PRE6YOL038W HXT15P54854 567 aa10.65□□□□□ -0.7
PRE6YOL038W RLI1Q03195 608 aaKnown RBP10.65□□□□□ -0.7
PRE6YOL038W ARG7Q04728 441 aa10.65□□□□□ -0.7
PRE6YOL038W SRB4P32569 687 aa10.64□□□□□ -0.71
PRE6YOL038W SPR1P32603 445 aa10.64□□□□□ -0.71
PRE6YOL038W NRP1P32770 719 aaKnown RBP RIP-Chip data10.64□□□□□ -0.71not detected
PRE6YOL038W IMP3P32899 183 aaPredicted RBP10.64□□□□□ -0.71
PRE6YOL038W MFT1P33441 392 aaKnown RBP10.64□□□□□ -0.71
PRE6YOL038W MEF2P39677 819 aa10.64□□□□□ -0.71
PRE6YOL038W RGI2P40188 164 aa10.64□□□□□ -0.71
PRE6YOL038W FET5P43561 622 aa10.64□□□□□ -0.71
PRE6YOL038W TY4A-JP47023 414 aa10.64□□□□□ -0.71
PRE6YOL038W EMI1Q04406 187 aa10.64□□□□□ -0.71
PRE6YOL038W POB3Q04636 552 aaKnown RBP10.64□□□□□ -0.71
PRE6YOL038W CIA1Q05583 330 aa10.64□□□□□ -0.71
PRE6YOL038W BNA5Q05979 453 aa10.64□□□□□ -0.71
PRE6YOL038W ESC2Q06340 456 aa10.64□□□□□ -0.71
PRE6YOL038W BUD20Q08004 166 aaPredicted RBP10.64□□□□□ -0.71
PRE6YOL038W AIM41Q12032 185 aa10.64□□□□□ -0.71
PRE6YOL038W SPS1P08458 490 aa10.63□□□□□ -0.71
PRE6YOL038W APA1P16550 321 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms