RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W JHD1P40034 492 aa2.82□□□□□ -1.96
CAF120YNL278W YRB1P41920 201 aaKnown RBP2.82□□□□□ -1.96
CAF120YNL278W SBE2P42223 864 aaKnown RBP2.82□□□□□ -1.96
CAF120YNL278W MRPS18P42847 217 aa2.82□□□□□ -1.96
CAF120YNL278W CIT3P43635 486 aa2.82□□□□□ -1.96
CAF120YNL278W YJR096WP47137 282 aa2.82□□□□□ -1.96
CAF120YNL278W SUT1P53032 299 aaKnown RBP2.82□□□□□ -1.96
CAF120YNL278W NOP13P53883 403 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
CAF120YNL278W YNL165WP53891 406 aa2.82□□□□□ -1.96
CAF120YNL278W YDR131CQ03899 556 aa2.82□□□□□ -1.96
CAF120YNL278W FMP42Q04991 504 aa2.82□□□□□ -1.96
CAF120YNL278W DNL4Q08387 944 aaPredicted RBP2.82□□□□□ -1.96
CAF120YNL278W FAP7Q12055 197 aaPredicted RBP2.82□□□□□ -1.96
CAF120YNL278W CDC9P04819 755 aa2.81□□□□□ -1.96
CAF120YNL278W SRD1P09007 221 aa2.81□□□□□ -1.96
CAF120YNL278W AAC3P18238 307 aa2.81□□□□□ -1.96
CAF120YNL278W VBA3P25594 458 aa2.81□□□□□ -1.96
CAF120YNL278W RAD14P28519 371 aa2.81□□□□□ -1.96
CAF120YNL278W DAL1P32375 460 aa2.81□□□□□ -1.96
CAF120YNL278W UBP11P36026 717 aa2.81□□□□□ -1.96
CAF120YNL278W FMP23P38231 175 aa2.81□□□□□ -1.96
CAF120YNL278W PCA1P38360 1216 aa2.81□□□□□ -1.96
CAF120YNL278W PKP1P40530 394 aa2.81□□□□□ -1.96
CAF120YNL278W AXL1P40851 1208 aa2.81□□□□□ -1.96
CAF120YNL278W IMA5P40884 581 aa2.81□□□□□ -1.96
CAF120YNL278W MMM1P41800 426 aa2.81□□□□□ -1.96
CAF120YNL278W LSB6P42951 607 aa2.81□□□□□ -1.96
CAF120YNL278W UBP15P50101 1230 aa2.81□□□□□ -1.96
CAF120YNL278W RPA14P50106 137 aa2.81□□□□□ -1.96
CAF120YNL278W YGR266WP53326 701 aa2.81□□□□□ -1.96
CAF120YNL278W YCS4Q06156 1176 aa2.81□□□□□ -1.96
CAF120YNL278W MLC2Q06580 163 aa2.81□□□□□ -1.96
CAF120YNL278W CUE5Q08412 411 aaKnown RBP2.81□□□□□ -1.96
CAF120YNL278W PDC1P06169 563 aaKnown RBP2.81□□□□□ -1.96
CAF120YNL278W TPK1P06244 397 aa2.81□□□□□ -1.96
CAF120YNL278W ARG80P07249 177 aa2.81□□□□□ -1.96
CAF120YNL278W RPS6AP0CX37 236 aaKnown RBP2.81□□□□□ -1.96
CAF120YNL278W RPS6BP0CX38 236 aaPredicted RBP2.81□□□□□ -1.96
CAF120YNL278W ERG11P10614 530 aa2.81□□□□□ -1.96
CAF120YNL278W PWP1P21304 576 aaKnown RBP2.81□□□□□ -1.96
CAF120YNL278W DMC1P25453 334 aa2.81□□□□□ -1.96
CAF120YNL278W SFP1P32432 683 aa2.81□□□□□ -1.96
CAF120YNL278W VPS17P32913 551 aa2.81□□□□□ -1.96
CAF120YNL278W DOM34P33309 386 aa2.81□□□□□ -1.96
CAF120YNL278W YBR284WP38150 797 aa2.81□□□□□ -1.96
CAF120YNL278W MSR1P38714 643 aa2.81□□□□□ -1.96
CAF120YNL278W END3P39013 349 aa2.81□□□□□ -1.96
CAF120YNL278W ECM1P39715 212 aa2.81□□□□□ -1.96
CAF120YNL278W DPH1P40487 425 aaKnown RBP2.81□□□□□ -1.96
CAF120YNL278W PRK1P40494 810 aa2.81□□□□□ -1.96
CAF120YNL278W CCT8P47079 568 aaKnown RBP2.81□□□□□ -1.96
CAF120YNL278W YGR012WP53206 393 aa2.81□□□□□ -1.96
CAF120YNL278W YDR222WQ04925 415 aa2.81□□□□□ -1.96
CAF120YNL278W COQ9Q05779 260 aa2.81□□□□□ -1.96
CAF120YNL278W RSC3Q06639 885 aa2.81□□□□□ -1.96
CAF120YNL278W RPC53P25441 422 aa2.8□□□□□ -1.96
CAF120YNL278W GBP2P25555 427 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
CAF120YNL278W PMI40P29952 429 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W GUT2P32191 649 aa2.8□□□□□ -1.96
CAF120YNL278W RPN2P32565 945 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W PTK1P36002 662 aaPredicted RBP2.8□□□□□ -1.96
CAF120YNL278W CCZ1P38273 704 aa2.8□□□□□ -1.96
CAF120YNL278W RTT107P38850 1070 aa2.8□□□□□ -1.96
CAF120YNL278W HXT6P39003 570 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W HXT7P39004 570 aa2.8□□□□□ -1.96
CAF120YNL278W MTW1P39731 289 aa2.8□□□□□ -1.96
CAF120YNL278W PAC1P39946 494 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W YNL320WP42840 284 aa2.8□□□□□ -1.96
CAF120YNL278W ARC35P53731 342 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W RPM2Q02773 1202 aa2.8□□□□□ -1.96
CAF120YNL278W INM2Q05533 292 aa2.8□□□□□ -1.96
CAF120YNL278W ECM38Q05902 660 aaPredicted RBP2.8□□□□□ -1.96
CAF120YNL278W APL4Q12028 832 aa2.8□□□□□ -1.96
CAF120YNL278W SCM3Q12334 223 aa2.8□□□□□ -1.96
CAF120YNL278W SPO21Q12411 609 aa2.8□□□□□ -1.96
CAF120YNL278W NSI1Q12457 570 aa2.8□□□□□ -1.96
CAF120YNL278W HSH49Q99181 213 aaPredicted RBP2.8□□□□□ -1.96
CAF120YNL278W CET1O13297 549 aaPredicted RBP2.8□□□□□ -1.96
CAF120YNL278W QCR7P00128 127 aa2.8□□□□□ -1.96
CAF120YNL278W ATP2P00830 511 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W BI4P03879 638 aa2.8□□□□□ -1.96
CAF120YNL278W RPS21AP0C0V8 87 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W SNA3P14359 133 aa2.8□□□□□ -1.96
CAF120YNL278W TAL1P15019 335 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W OM45P16547 393 aa2.8□□□□□ -1.96
CAF120YNL278W SLM5P25345 492 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W OCA4P25366 362 aa2.8□□□□□ -1.96
CAF120YNL278W VMA3P25515 160 aa2.8□□□□□ -1.96
CAF120YNL278W SSE1P32589 693 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W HES1P35843 434 aa2.8□□□□□ -1.96
CAF120YNL278W SHM2P37291 469 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W MRX3P38172 270 aa2.8□□□□□ -1.96
CAF120YNL278W UBS1P38290 277 aa2.8□□□□□ -1.96
CAF120YNL278W YAT2P40017 923 aa2.8□□□□□ -1.96
CAF120YNL278W MPH1P40562 993 aa2.8□□□□□ -1.96
CAF120YNL278W SKP2P42843 763 aa2.8□□□□□ -1.96
CAF120YNL278W DUG1P43616 481 aaKnown RBP2.8□□□□□ -1.96
CAF120YNL278W ENT3P47160 408 aa2.8□□□□□ -1.96
CAF120YNL278W KAP114P53067 1004 aa2.8□□□□□ -1.96
CAF120YNL278W ERP6P53198 216 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms