RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W ECI1Q05871 280 aa3.04□□□□□ -1.92
DDR48YMR173W NRT1Q08485 598 aa3.04□□□□□ -1.92
DDR48YMR173W ICL2Q12031 575 aa3.04□□□□□ -1.92
DDR48YMR173W PCT1P13259 424 aa3.03□□□□□ -1.92
DDR48YMR173W SDS24P38314 527 aa3.03□□□□□ -1.92
DDR48YMR173W YIL169CP40442 995 aa3.03□□□□□ -1.92
DDR48YMR173W DJP1P40564 432 aa3.03□□□□□ -1.92
DDR48YMR173W UBX6P47049 396 aa3.03□□□□□ -1.92
DDR48YMR173W YGL260WP53056 76 aa3.03□□□□□ -1.92
DDR48YMR173W ARP9Q05123 467 aa3.03□□□□□ -1.92
DDR48YMR173W BRE1Q07457 700 aaKnown RBP3.03□□□□□ -1.92
DDR48YMR173W RVB2Q12464 471 aaKnown RBP3.03□□□□□ -1.92
DDR48YMR173W QRI7P43122 407 aa3.02□□□□□ -1.93
DDR48YMR173W POS5Q06892 414 aa3.02□□□□□ -1.93
DDR48YMR173W IWR1Q07532 353 aaPredicted RBP3.02□□□□□ -1.93
DDR48YMR173W GPN2Q08726 347 aaPredicted RBP3.02□□□□□ -1.93
DDR48YMR173W YOL114CQ12322 202 aa3.02□□□□□ -1.93
DDR48YMR173W GPA1P08539 472 aa3.01□□□□□ -1.93
DDR48YMR173W SST2P11972 698 aaKnown RBP3.01□□□□□ -1.93
DDR48YMR173W CDC23P16522 626 aa3.01□□□□□ -1.93
DDR48YMR173W YOX1P34161 385 aa3.01□□□□□ -1.93
DDR48YMR173W MNN2P38069 597 aa3.01□□□□□ -1.93
DDR48YMR173W LEU5P38702 357 aa3.01□□□□□ -1.93
DDR48YMR173W YND1P40009 630 aa3.01□□□□□ -1.93
DDR48YMR173W VPS25P47142 202 aa3.01□□□□□ -1.93
DDR48YMR173W CPR6P53691 371 aaKnown RBP3.01□□□□□ -1.93
DDR48YMR173W TEP1P53916 434 aa3.01□□□□□ -1.93
DDR48YMR173W ATG21Q02887 496 aa3.01□□□□□ -1.93
DDR48YMR173W MTG1Q03151 367 aaPredicted RBP3.01□□□□□ -1.93
DDR48YMR173W ECM16Q04217 1267 aaKnown RBP3.01□□□□□ -1.93
DDR48YMR173W YDR109CQ04585 715 aa3.01□□□□□ -1.93
DDR48YMR173W YLR455WQ06188 304 aa3.01□□□□□ -1.93
DDR48YMR173W SUL2Q12325 893 aa3.01□□□□□ -1.93
DDR48YMR173W YML003WP0CF16 290 aa3□□□□□ -1.93
DDR48YMR173W RPL42AP0CX27 106 aaKnown RBP3□□□□□ -1.93
DDR48YMR173W RPL42BP0CX28 106 aaKnown RBP3□□□□□ -1.93
DDR48YMR173W PET122P10355 254 aa3□□□□□ -1.93
DDR48YMR173W MRP2P10663 115 aaPredicted RBP3□□□□□ -1.93
DDR48YMR173W LRE1P25579 583 aaKnown RBP3□□□□□ -1.93
DDR48YMR173W GEX2P36173 615 aa3□□□□□ -1.93
DDR48YMR173W EFM2P38347 419 aa3□□□□□ -1.93
DDR48YMR173W ASG1P40467 964 aa3□□□□□ -1.93
DDR48YMR173W TAM41P53230 385 aa3□□□□□ -1.93
DDR48YMR173W YMR317WQ04893 1140 aa3□□□□□ -1.93
DDR48YMR173W PIF1P07271 859 aa2.99□□□□□ -1.93
DDR48YMR173W RIT1P23796 513 aa2.99□□□□□ -1.93
DDR48YMR173W YSP3P25036 478 aa2.99□□□□□ -1.93
DDR48YMR173W STE50P25344 346 aa2.99□□□□□ -1.93
DDR48YMR173W FSH1P38777 243 aaKnown RBP2.99□□□□□ -1.93
DDR48YMR173W VRG4P40107 337 aa2.99□□□□□ -1.93
DDR48YMR173W RPN11P43588 306 aaKnown RBP2.99□□□□□ -1.93
DDR48YMR173W SAD1P43589 448 aa2.99□□□□□ -1.93
DDR48YMR173W PEX8P53248 589 aa2.99□□□□□ -1.93
DDR48YMR173W ADE16P54113 591 aaKnown RBP2.99□□□□□ -1.93
DDR48YMR173W YMR254CQ04838 102 aa2.99□□□□□ -1.93
DDR48YMR173W FRE3Q08905 711 aa2.99□□□□□ -1.93
DDR48YMR173W TMA7Q3E764 64 aaKnown RBP2.99□□□□□ -1.93
DDR48YMR173W ADE3P07245 946 aaKnown RBP2.98□□□□□ -1.93
DDR48YMR173W POL3P15436 1097 aa2.98□□□□□ -1.93
DDR48YMR173W YCR006CP25350 157 aa2.98□□□□□ -1.93
DDR48YMR173W PPZ1P26570 692 aa2.98□□□□□ -1.93
DDR48YMR173W ARP2P32381 391 aaKnown RBP2.98□□□□□ -1.93
DDR48YMR173W YKL133CP36066 463 aa2.98□□□□□ -1.93
DDR48YMR173W APM3P38153 483 aa2.98□□□□□ -1.93
DDR48YMR173W YGL036WP53185 909 aaPredicted RBP2.98□□□□□ -1.93
DDR48YMR173W FMP42Q04991 504 aa2.98□□□□□ -1.93
DDR48YMR173W RTT103Q05543 409 aa2.98□□□□□ -1.93
DDR48YMR173W MLC2Q06580 163 aa2.98□□□□□ -1.93
DDR48YMR173W APL5Q08951 932 aaKnown RBP2.98□□□□□ -1.93
DDR48YMR173W YLR112WQ12130 139 aa2.98□□□□□ -1.93
DDR48YMR173W MIS1P09440 975 aaKnown RBP2.97□□□□□ -1.93
DDR48YMR173W SRP54P20424 541 aaKnown RBP2.97□□□□□ -1.93
DDR48YMR173W SPC72P39723 622 aa2.97□□□□□ -1.93
DDR48YMR173W SKP2P42843 763 aa2.97□□□□□ -1.93
DDR48YMR173W IML2P47031 731 aa2.97□□□□□ -1.93
DDR48YMR173W HOS2P53096 452 aaPredicted RBP2.97□□□□□ -1.93
DDR48YMR173W DCP2P53550 970 aaKnown RBP2.97□□□□□ -1.93
DDR48YMR173W YNL181WP53878 407 aa2.97□□□□□ -1.93
DDR48YMR173W ESBP6P53918 673 aa2.97□□□□□ -1.93
DDR48YMR173W ASI1P54074 624 aa2.97□□□□□ -1.93
DDR48YMR173W IZH1Q03419 316 aa2.97□□□□□ -1.93
DDR48YMR173W SND1Q04007 877 aa2.97□□□□□ -1.93
DDR48YMR173W VAM6Q07468 1049 aa2.97□□□□□ -1.93
DDR48YMR173W TAH18Q12181 623 aa2.97□□□□□ -1.93
DDR48YMR173W MPD2Q99316 277 aa2.97□□□□□ -1.93
DDR48YMR173W MSS18P08593 268 aa2.96□□□□□ -1.94
DDR48YMR173W SUI3P09064 285 aaKnown RBP2.96□□□□□ -1.94
DDR48YMR173W SWI4P25302 1093 aaKnown RBP2.96□□□□□ -1.94
DDR48YMR173W RFA2P26754 273 aaKnown RBP2.96□□□□□ -1.94
DDR48YMR173W GCD7P32502 381 aaPredicted RBP2.96□□□□□ -1.94
DDR48YMR173W EXO84P38261 753 aa2.96□□□□□ -1.94
DDR48YMR173W BZZ1P38822 633 aa2.96□□□□□ -1.94
DDR48YMR173W CUL3P53202 744 aa2.96□□□□□ -1.94
DDR48YMR173W MET14Q02196 202 aa2.96□□□□□ -1.94
DDR48YMR173W DIG1Q03063 452 aaKnown RBP2.96□□□□□ -1.94
DDR48YMR173W YMR230W-AQ3E7B5 62 aa2.96□□□□□ -1.94
DDR48YMR173W YER145C-AA0A023PYF4 145 aa2.95□□□□□ -1.94
DDR48YMR173W SPO16P17122 198 aa2.95□□□□□ -1.94
DDR48YMR173W SEC1P30619 724 aaKnown RBP2.95□□□□□ -1.94
DDR48YMR173W FMP46P36141 133 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms