RNA–Protein interactions for RNA: YML118W

NGL3, Transcript of 3'-5' exonuclease specific for poly-A RNAs, yeast

Gene NGL3, Length 1,518 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NGL3	YML118W	GCN5	Q03330	439 aa		4.6	□□□□□ -1.67
NGL3	YML118W	FRE5	Q08908	694 aa		4.6	□□□□□ -1.67
NGL3	YML118W	YPL191C	Q08930	360 aa		4.6	□□□□□ -1.67
NGL3	YML118W	SPE4	Q12455	300 aa		4.6	□□□□□ -1.67
NGL3	YML118W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
NGL3	YML118W	CLB1	P24868	471 aa		4.59	□□□□□ -1.67
NGL3	YML118W	LRE1	P25579	583 aa	Known RBP	4.59	□□□□□ -1.67
NGL3	YML118W	CDC20	P26309	610 aa		4.59	□□□□□ -1.67
NGL3	YML118W	KES1	P35844	434 aa	Known RBP	4.59	□□□□□ -1.67
NGL3	YML118W	MRPL7	P36519	292 aa		4.59	□□□□□ -1.67
NGL3	YML118W	VID24	P38263	362 aa		4.59	□□□□□ -1.67
NGL3	YML118W	DOT5	P40553	215 aa		4.59	□□□□□ -1.67
NGL3	YML118W	MPS3	P47069	682 aa		4.59	□□□□□ -1.67
NGL3	YML118W	YML037C	Q03703	340 aa		4.59	□□□□□ -1.67
NGL3	YML118W	YLR224W	Q05947	369 aa		4.59	□□□□□ -1.67
NGL3	YML118W	ATG23	Q06671	453 aa		4.59	□□□□□ -1.67
NGL3	YML118W	IZH3	Q07959	543 aa		4.59	□□□□□ -1.67
NGL3	YML118W	YRF1-4	O13559	1382 aa		4.59	□□□□□ -1.67
NGL3	YML118W	YML003W	P0CF16	290 aa		4.58	□□□□□ -1.68
NGL3	YML118W	STE12	P13574	688 aa		4.58	□□□□□ -1.68
NGL3	YML118W	APE1	P14904	514 aa		4.58	□□□□□ -1.68
NGL3	YML118W	SRB5	P32585	307 aa		4.58	□□□□□ -1.68
NGL3	YML118W	YJL055W	P47044	245 aa		4.58	□□□□□ -1.68
NGL3	YML118W	LYS4	P49367	693 aa	Predicted RBP	4.58	□□□□□ -1.68
NGL3	YML118W	MUP1	P50276	574 aa		4.58	□□□□□ -1.68
NGL3	YML118W	YGL036W	P53185	909 aa	Predicted RBP	4.58	□□□□□ -1.68
NGL3	YML118W	BNI5	P53890	448 aa	Known RBP	4.58	□□□□□ -1.68
NGL3	YML118W	OAZ1	Q02803	292 aa		4.58	□□□□□ -1.68
NGL3	YML118W	EFR3	Q03653	782 aa	Known RBP	4.58	□□□□□ -1.68
NGL3	YML118W	GYL1	Q04322	720 aa		4.58	□□□□□ -1.68
NGL3	YML118W	GTB1	Q04924	702 aa		4.58	□□□□□ -1.68
NGL3	YML118W	BUD7	Q08754	746 aa		4.58	□□□□□ -1.68
NGL3	YML118W	PRS5	Q12265	496 aa	Known RBP	4.58	□□□□□ -1.68
NGL3	YML118W	YBR255C-A	Q3E776	120 aa		4.58	□□□□□ -1.68
NGL3	YML118W	YPT6	Q99260	215 aa		4.58	□□□□□ -1.68
NGL3	YML118W	YBR085C-A	O43137	85 aa		4.57	□□□□□ -1.68
NGL3	YML118W	TRP3	P00937	484 aa		4.57	□□□□□ -1.68
NGL3	YML118W	PDE1	P22434	369 aa		4.57	□□□□□ -1.68
NGL3	YML118W	CST26	P38226	397 aa		4.57	□□□□□ -1.68
NGL3	YML118W	YBR053C	P38235	358 aa		4.57	□□□□□ -1.68
NGL3	YML118W	SDH8	P38345	138 aa		4.57	□□□□□ -1.68
NGL3	YML118W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
NGL3	YML118W	SEC24	P40482	926 aa	Known RBP	4.57	□□□□□ -1.68
NGL3	YML118W	ZIM17	P42844	174 aa		4.57	□□□□□ -1.68
NGL3	YML118W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
NGL3	YML118W	INP52	P50942	1183 aa		4.57	□□□□□ -1.68
NGL3	YML118W	IMO32	P53219	342 aa		4.57	□□□□□ -1.68
NGL3	YML118W	REC107	P21651	314 aa		4.56	□□□□□ -1.68
NGL3	YML118W	RRP7	P25368	297 aa	Predicted RBP	4.56	□□□□□ -1.68
NGL3	YML118W	YCR051W	P25631	222 aa		4.56	□□□□□ -1.68
NGL3	YML118W	CDC15	P27636	974 aa		4.56	□□□□□ -1.68
NGL3	YML118W	PUP2	P32379	260 aa		4.56	□□□□□ -1.68
NGL3	YML118W	RPN2	P32565	945 aa	Known RBP	4.56	□□□□□ -1.68
NGL3	YML118W	CCT6	P39079	546 aa		4.56	□□□□□ -1.68
NGL3	YML118W	MEP1	P40260	492 aa		4.56	□□□□□ -1.68
NGL3	YML118W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
NGL3	YML118W	UBC11	P52492	156 aa		4.56	□□□□□ -1.68
NGL3	YML118W	PAN2	P53010	1115 aa	Predicted RBP	4.56	□□□□□ -1.68
NGL3	YML118W	YDR132C	Q03900	495 aa		4.56	□□□□□ -1.68
NGL3	YML118W	DLT1	Q04216	342 aa		4.56	□□□□□ -1.68
NGL3	YML118W	YDR341C	Q05506	607 aa	Known RBP	4.56	□□□□□ -1.68
NGL3	YML118W	ESC8	Q08119	714 aa		4.56	□□□□□ -1.68
NGL3	YML118W	CUE5	Q08412	411 aa	Known RBP	4.56	□□□□□ -1.68
NGL3	YML118W	MET3	P08536	511 aa		4.56	□□□□□ -1.68
NGL3	YML118W	CAF20	P12962	161 aa	Known RBP	4.56	□□□□□ -1.68
NGL3	YML118W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
NGL3	YML118W	URA7	P28274	579 aa	Known RBP	4.56	□□□□□ -1.68
NGL3	YML118W	MGM1	P32266	881 aa		4.56	□□□□□ -1.68
NGL3	YML118W	CTP1	P38152	299 aa		4.56	□□□□□ -1.68
NGL3	YML118W	ARO9	P38840	513 aa	Predicted RBP	4.56	□□□□□ -1.68
NGL3	YML118W	LNP1	P38878	278 aa		4.56	□□□□□ -1.68
NGL3	YML118W	THI6	P41835	540 aa		4.56	□□□□□ -1.68
NGL3	YML118W	SAE2	P46946	345 aa		4.56	□□□□□ -1.68
NGL3	YML118W	MRPL22	P53881	309 aa		4.56	□□□□□ -1.68
NGL3	YML118W	INA17	Q02888	182 aa		4.56	□□□□□ -1.68
NGL3	YML118W	USA1	Q03714	838 aa		4.56	□□□□□ -1.68
NGL3	YML118W	PRP42	Q03776	544 aa	Known RBP	4.56	□□□□□ -1.68
NGL3	YML118W	ENB1	Q08299	606 aa		4.56	□□□□□ -1.68
NGL3	YML118W	YPL272C	Q08984	517 aa		4.56	□□□□□ -1.68
NGL3	YML118W	ATG29	Q12092	213 aa		4.56	□□□□□ -1.68
NGL3	YML118W	NFI1	Q12216	726 aa		4.56	□□□□□ -1.68
NGL3	YML118W	YER175W-A	Q8TGU4	54 aa		4.56	□□□□□ -1.68
NGL3	YML118W	VMA2	P16140	517 aa	Known RBP	4.55	□□□□□ -1.68
NGL3	YML118W	TRX1	P22217	103 aa	Known RBP	4.55	□□□□□ -1.68
NGL3	YML118W	YIH1	P25637	258 aa		4.55	□□□□□ -1.68
NGL3	YML118W	FUB1	P25659	250 aa		4.55	□□□□□ -1.68
NGL3	YML118W	RFA2	P26754	273 aa	Known RBP	4.55	□□□□□ -1.68
NGL3	YML118W	PAP1	P29468	568 aa	Known RBP	4.55	□□□□□ -1.68
NGL3	YML118W	PHO11	P35842	467 aa		4.55	□□□□□ -1.68
NGL3	YML118W	ELF1	P36053	145 aa		4.55	□□□□□ -1.68
NGL3	YML118W	YKR073C	P36153	106 aa		4.55	□□□□□ -1.68
NGL3	YML118W	AGP2	P38090	596 aa		4.55	□□□□□ -1.68
NGL3	YML118W	POL12	P38121	705 aa	Predicted RBP	4.55	□□□□□ -1.68
NGL3	YML118W	PHO12	P38693	467 aa		4.55	□□□□□ -1.68
NGL3	YML118W	OTU2	P38747	307 aa	Known RBP	4.55	□□□□□ -1.68
NGL3	YML118W	REV7	P38927	245 aa		4.55	□□□□□ -1.68
NGL3	YML118W	ELO3	P40319	345 aa		4.55	□□□□□ -1.68
NGL3	YML118W	IRC24	P40580	263 aa		4.55	□□□□□ -1.68
NGL3	YML118W	SPT20	P50875	604 aa		4.55	□□□□□ -1.68
NGL3	YML118W	HOS2	P53096	452 aa	Predicted RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms