RNA–Protein interactions for RNA: YML092C

PRE8, Transcript of Alpha 2 subunit of the 20S proteasome, yeastyeast

Gene PRE8, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE8YML092C NDC80P40460 691 aa3.08□□□□□ -1.92
PRE8YML092C BAP3P41815 604 aa3.08□□□□□ -1.92
PRE8YML092C ORC5P50874 479 aa3.08□□□□□ -1.92
PRE8YML092C AIM14P53109 570 aa3.08□□□□□ -1.92
PRE8YML092C PCL10P53124 433 aa3.08□□□□□ -1.92
PRE8YML092C VPS73P53142 486 aaKnown RBP3.08□□□□□ -1.92
PRE8YML092C MCM21Q06675 368 aa3.08□□□□□ -1.92
PRE8YML092C LEA1Q08963 238 aaPredicted RBP3.08□□□□□ -1.92
PRE8YML092C YPQ1Q12010 308 aa3.08□□□□□ -1.92
PRE8YML092C SPE3Q12074 293 aaKnown RBP3.08□□□□□ -1.92
PRE8YML092C CTF3Q12748 733 aa3.08□□□□□ -1.92
PRE8YML092C CET1O13297 549 aaPredicted RBP3.07□□□□□ -1.92
PRE8YML092C GAL80P04387 435 aa3.07□□□□□ -1.92
PRE8YML092C YEL076C-AP0CX16 216 aa3.07□□□□□ -1.92
PRE8YML092C YLR464WP0CX17 216 aa3.07□□□□□ -1.92
PRE8YML092C MATALPHA2P0CY08 210 aa3.07□□□□□ -1.92
PRE8YML092C HMLALPHA2P0CY09 210 aa3.07□□□□□ -1.92
PRE8YML092C PYC1P11154 1178 aaKnown RBP3.07□□□□□ -1.92
PRE8YML092C PPG1P32838 368 aa3.07□□□□□ -1.92
PRE8YML092C MNN4P36044 1178 aa3.07□□□□□ -1.92
PRE8YML092C CUE2P36075 443 aaKnown RBP3.07□□□□□ -1.92
PRE8YML092C YBR056WP38081 501 aa3.07□□□□□ -1.92
PRE8YML092C OPY1P38271 328 aa3.07□□□□□ -1.92
PRE8YML092C LYS9P38999 446 aa3.07□□□□□ -1.92
PRE8YML092C YEL076CP39971 216 aa3.07□□□□□ -1.92
PRE8YML092C RMD8P43620 662 aa3.07□□□□□ -1.92
PRE8YML092C FYV8P46949 817 aaKnown RBP3.07□□□□□ -1.92
PRE8YML092C BFA1P47113 574 aa3.07□□□□□ -1.92
PRE8YML092C PSP1P50896 841 aaKnown RBP3.07□□□□□ -1.92
PRE8YML092C REC102Q02721 264 aa3.07□□□□□ -1.92
PRE8YML092C VTC3Q02725 835 aa3.07□□□□□ -1.92
PRE8YML092C UGO1Q03327 502 aa3.07□□□□□ -1.92
PRE8YML092C HER2Q03557 464 aa3.07□□□□□ -1.92
PRE8YML092C YLR407WQ06070 228 aa3.07□□□□□ -1.92
PRE8YML092C YLH47Q06493 454 aa3.07□□□□□ -1.92
PRE8YML092C CDD1Q06549 142 aa3.07□□□□□ -1.92
PRE8YML092C BSP1Q06604 576 aa3.07□□□□□ -1.92
PRE8YML092C SHS1Q07657 551 aa3.07□□□□□ -1.92
PRE8YML092C SDH5Q08230 162 aa3.07□□□□□ -1.92
PRE8YML092C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
PRE8YML092C CEX1Q12453 761 aa3.07□□□□□ -1.92
PRE8YML092C SMC6Q12749 1114 aa3.07□□□□□ -1.92
PRE8YML092C HRP1Q99383 534 aaKnown RBP3.07□□□□□ -1.92
PRE8YML092C TUF1P02992 437 aaKnown RBP3.06□□□□□ -1.92
PRE8YML092C TPK1P06244 397 aa3.06□□□□□ -1.92
PRE8YML092C IRA1P18963 3092 aa3.06□□□□□ -1.92
PRE8YML092C KGD2P19262 463 aaPredicted RBP3.06□□□□□ -1.92
PRE8YML092C RNR1P21524 888 aaKnown RBP3.06□□□□□ -1.92
PRE8YML092C ERG6P25087 383 aaKnown RBP3.06□□□□□ -1.92
PRE8YML092C GPI10P30777 616 aa3.06□□□□□ -1.92
PRE8YML092C SWE1P32944 819 aa3.06□□□□□ -1.92
PRE8YML092C PHO11P35842 467 aa3.06□□□□□ -1.92
PRE8YML092C TCD2P36101 447 aaKnown RBP3.06□□□□□ -1.92
PRE8YML092C UTH1P36135 365 aa3.06□□□□□ -1.92
PRE8YML092C MMS4P38257 691 aa3.06□□□□□ -1.92
PRE8YML092C PHO12P38693 467 aa3.06□□□□□ -1.92
PRE8YML092C SIP3P38717 1229 aa3.06□□□□□ -1.92
PRE8YML092C YNL195CP40168 261 aa3.06□□□□□ -1.92
PRE8YML092C SPO22P40511 975 aa3.06□□□□□ -1.92
PRE8YML092C CHS6P40955 746 aa3.06□□□□□ -1.92
PRE8YML092C TAH11P47112 604 aa3.06□□□□□ -1.92
PRE8YML092C YGR153WP48238 217 aa3.06□□□□□ -1.92
PRE8YML092C CBK1P53894 756 aa3.06□□□□□ -1.92
PRE8YML092C SMX3P54999 86 aaPredicted RBP3.06□□□□□ -1.92
PRE8YML092C SEC5P89102 971 aa3.06□□□□□ -1.92
PRE8YML092C CWC21Q03375 135 aaKnown RBP3.06□□□□□ -1.92
PRE8YML092C NTG2Q08214 380 aa3.06□□□□□ -1.92
PRE8YML092C DIA2Q08496 732 aaPredicted RBP3.06□□□□□ -1.92
PRE8YML092C HRT3Q12347 344 aa3.06□□□□□ -1.92
PRE8YML092C ZRT2Q12436 422 aa3.06□□□□□ -1.92
PRE8YML092C ECM3Q99252 613 aa3.06□□□□□ -1.92
PRE8YML092C FRS2P15625 503 aaKnown RBP3.05□□□□□ -1.92
PRE8YML092C FPR1P20081 114 aaKnown RBP3.05□□□□□ -1.92
PRE8YML092C CBP3P21560 335 aa3.05□□□□□ -1.92
PRE8YML092C MIH1P23748 554 aa3.05□□□□□ -1.92
PRE8YML092C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
PRE8YML092C RAD16P31244 790 aa3.05□□□□□ -1.92
PRE8YML092C CCR4P31384 837 aaKnown RBP3.05□□□□□ -1.92
PRE8YML092C YSC83P32792 385 aa3.05□□□□□ -1.92
PRE8YML092C GLG1P36143 616 aa3.05□□□□□ -1.92
PRE8YML092C AGP2P38090 596 aa3.05□□□□□ -1.92
PRE8YML092C YHR054CP38780 354 aa3.05□□□□□ -1.92
PRE8YML092C HRB1P38922 454 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
PRE8YML092C GET2P40056 285 aa3.05□□□□□ -1.92
PRE8YML092C ARG2P40360 574 aa3.05□□□□□ -1.92
PRE8YML092C YIL166CP40445 542 aa3.05□□□□□ -1.92
PRE8YML092C VTC2P43585 828 aa3.05□□□□□ -1.92
PRE8YML092C VPS25P47142 202 aa3.05□□□□□ -1.92
PRE8YML092C NMA2P53204 395 aa3.05□□□□□ -1.92
PRE8YML092C SDA1P53313 767 aaKnown RBP3.05□□□□□ -1.92
PRE8YML092C TOF1P53840 1238 aa3.05□□□□□ -1.92
PRE8YML092C IMP4P53941 290 aaKnown RBP3.05□□□□□ -1.92
PRE8YML092C YAT1P80235 687 aa3.05□□□□□ -1.92
PRE8YML092C HEL2Q05580 639 aaKnown RBP3.05□□□□□ -1.92
PRE8YML092C YDL057WQ07379 328 aa3.05□□□□□ -1.92
PRE8YML092C DCS2Q12123 353 aa3.05□□□□□ -1.92
PRE8YML092C USV1Q12132 391 aa3.05□□□□□ -1.92
PRE8YML092C NDJ1Q12366 352 aa3.05□□□□□ -1.92
PRE8YML092C RIF1P29539 1916 aa3.05□□□□□ -1.92
PRE8YML092C ASP3-2P0CX77 362 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms