RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W SUI3P09064 285 aaKnown RBP5.32□□□□□ -1.56
VPS36YLR417W FLC2P39719 783 aa5.32□□□□□ -1.56
VPS36YLR417W NPA3P47122 385 aa5.32□□□□□ -1.56
VPS36YLR417W YGL117WP53133 265 aa5.32□□□□□ -1.56
VPS36YLR417W NRD1P53617 575 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
VPS36YLR417W ARE2P53629 642 aaKnown RBP5.32□□□□□ -1.56
VPS36YLR417W YNR061CP53747 219 aa5.32□□□□□ -1.56
VPS36YLR417W INN1P53901 409 aa5.32□□□□□ -1.56
VPS36YLR417W TIM10P87108 93 aa5.32□□□□□ -1.56
VPS36YLR417W MFB1Q04922 465 aa5.32□□□□□ -1.56
VPS36YLR417W YPL191CQ08930 360 aa5.32□□□□□ -1.56
VPS36YLR417W NOP58Q12499 511 aaKnown RBP5.32□□□□□ -1.56
VPS36YLR417W COX1P00401 534 aa5.31□□□□□ -1.56
VPS36YLR417W YCK1P23291 538 aa5.31□□□□□ -1.56
VPS36YLR417W PGS1P25578 521 aa5.31□□□□□ -1.56
VPS36YLR417W MRPL9P31334 269 aa5.31□□□□□ -1.56
VPS36YLR417W NFU1P32860 256 aa5.31□□□□□ -1.56
VPS36YLR417W KTR3P38130 404 aaPredicted RBP5.31□□□□□ -1.56
VPS36YLR417W ERC1P38767 581 aa5.31□□□□□ -1.56
VPS36YLR417W NPR2P39923 615 aa5.31□□□□□ -1.56
VPS36YLR417W IME4P41833 600 aa5.31□□□□□ -1.56
VPS36YLR417W VTC2P43585 828 aa5.31□□□□□ -1.56
VPS36YLR417W UBX6P47049 396 aa5.31□□□□□ -1.56
VPS36YLR417W MSY1P48527 492 aa5.31□□□□□ -1.56
VPS36YLR417W COG2P53271 262 aa5.31□□□□□ -1.56
VPS36YLR417W TAF11Q04226 346 aa5.31□□□□□ -1.56
VPS36YLR417W YLR287CQ05881 355 aa5.31□□□□□ -1.56
VPS36YLR417W AI5_ALPHAQ9ZZX1 630 aa5.31□□□□□ -1.56
VPS36YLR417W CET1O13297 549 aaPredicted RBP5.31□□□□□ -1.56
VPS36YLR417W TPK2P06245 380 aa5.31□□□□□ -1.56
VPS36YLR417W DMC1P25453 334 aa5.31□□□□□ -1.56
VPS36YLR417W GDA1P32621 518 aa5.31□□□□□ -1.56
VPS36YLR417W SDS3P40505 327 aa5.31□□□□□ -1.56
VPS36YLR417W ARF3P40994 183 aaRIP-Chip data5.31□□□□□ -1.56not detected
VPS36YLR417W RMD8P43620 662 aa5.31□□□□□ -1.56
VPS36YLR417W DCP2P53550 970 aaKnown RBP5.31□□□□□ -1.56
VPS36YLR417W WAR1Q03631 944 aa5.31□□□□□ -1.56
VPS36YLR417W YOR019WQ99248 730 aa5.31□□□□□ -1.56
VPS36YLR417W Q0010Q9ZZX9 128 aa5.31□□□□□ -1.56
VPS36YLR417W CDC43P18898 376 aa5.3□□□□□ -1.56
VPS36YLR417W KIN3P22209 435 aa5.3□□□□□ -1.56
VPS36YLR417W RTS1P38903 757 aa5.3□□□□□ -1.56
VPS36YLR417W YML053CQ04978 212 aa5.3□□□□□ -1.56
VPS36YLR417W RIX7Q07844 837 aaKnown RBP5.3□□□□□ -1.56
VPS36YLR417W CTI6Q08923 506 aa5.3□□□□□ -1.56
VPS36YLR417W HSH49Q99181 213 aaPredicted RBP5.3□□□□□ -1.56
VPS36YLR417W SSN2P38931 1420 aa5.3□□□□□ -1.56
VPS36YLR417W YBR085C-AO43137 85 aa5.29□□□□□ -1.56
VPS36YLR417W LAC1P28496 418 aa5.29□□□□□ -1.56
VPS36YLR417W NPL6P32832 435 aa5.29□□□□□ -1.56
VPS36YLR417W VBA2P38358 474 aaKnown RBP5.29□□□□□ -1.56
VPS36YLR417W UTP9P38882 575 aaKnown RBP5.29□□□□□ -1.56
VPS36YLR417W VPS75P53853 264 aa5.29□□□□□ -1.56
VPS36YLR417W RAD33Q04231 177 aa5.29□□□□□ -1.56
VPS36YLR417W YDR109CQ04585 715 aa5.29□□□□□ -1.56
VPS36YLR417W SKG3Q06315 1026 aa5.29□□□□□ -1.56
VPS36YLR417W CRN1Q06440 651 aa5.29□□□□□ -1.56
VPS36YLR417W RCN2Q12044 265 aa5.29□□□□□ -1.56
VPS36YLR417W LYS21Q12122 440 aaKnown RBP5.29□□□□□ -1.56
VPS36YLR417W YSP3P25036 478 aa5.28□□□□□ -1.56
VPS36YLR417W OPT1P40897 799 aa5.28□□□□□ -1.56
VPS36YLR417W PLM2Q04383 521 aa5.28□□□□□ -1.56
VPS36YLR417W ARP9Q05123 467 aa5.28□□□□□ -1.56
VPS36YLR417W PCL8Q08966 492 aa5.28□□□□□ -1.56
VPS36YLR417W CKA1P15790 372 aa5.28□□□□□ -1.56
VPS36YLR417W PHM8P40025 321 aa5.28□□□□□ -1.56
VPS36YLR417W JHD1P40034 492 aa5.28□□□□□ -1.56
VPS36YLR417W MRX6P48564 524 aa5.28□□□□□ -1.56
VPS36YLR417W ASN1P49089 572 aaKnown RBP5.28□□□□□ -1.56
VPS36YLR417W YAT1P80235 687 aa5.28□□□□□ -1.56
VPS36YLR417W CTF4Q01454 927 aa5.28□□□□□ -1.56
VPS36YLR417W INA17Q02888 182 aa5.28□□□□□ -1.56
VPS36YLR417W SWA2Q06677 668 aa5.28□□□□□ -1.56
VPS36YLR417W TCO89Q08921 799 aa5.28□□□□□ -1.56
VPS36YLR417W AHA1Q12449 350 aaKnown RBP5.28□□□□□ -1.56
VPS36YLR417W YMR084WA2P2R3 262 aa5.27□□□□□ -1.57
VPS36YLR417W RPL7AP05737 244 aaKnown RBP5.27□□□□□ -1.57
VPS36YLR417W KAR3P17119 729 aa5.27□□□□□ -1.57
VPS36YLR417W PMA2P19657 947 aa5.27□□□□□ -1.57
VPS36YLR417W OAR1P35731 278 aa5.27□□□□□ -1.57
VPS36YLR417W MUP3P38734 546 aa5.27□□□□□ -1.57
VPS36YLR417W SAP1P39955 897 aaKnown RBP5.27□□□□□ -1.57
VPS36YLR417W TPA1P40032 644 aaKnown RBP5.27□□□□□ -1.57
VPS36YLR417W CIR1P42940 261 aa5.27□□□□□ -1.57
VPS36YLR417W YFL015CP43578 164 aa5.27□□□□□ -1.57
VPS36YLR417W DSD1P53095 428 aa5.27□□□□□ -1.57
VPS36YLR417W AAT1Q01802 451 aa5.27□□□□□ -1.57
VPS36YLR417W RPT6Q01939 405 aaKnown RBP5.27□□□□□ -1.57
VPS36YLR417W NGL3Q03210 505 aa5.27□□□□□ -1.57
VPS36YLR417W SYF1Q04048 859 aaPredicted RBP5.27□□□□□ -1.57
VPS36YLR417W UTP21Q06078 939 aaPredicted RBP5.27□□□□□ -1.57
VPS36YLR417W CIR2Q08822 631 aa5.27□□□□□ -1.57
VPS36YLR417W RPL7BQ12213 244 aaKnown RBP5.27□□□□□ -1.57
VPS36YLR417W SKI3P17883 1432 aaKnown RBP5.26□□□□□ -1.57
VPS36YLR417W ARG3P05150 338 aa5.26□□□□□ -1.57
VPS36YLR417W SES1P07284 462 aaKnown RBP5.26□□□□□ -1.57
VPS36YLR417W FUR1P18562 216 aaKnown RBP5.26□□□□□ -1.57
VPS36YLR417W SRP54P20424 541 aaKnown RBP5.26□□□□□ -1.57
VPS36YLR417W RRP43P25359 394 aaPredicted RBP5.26□□□□□ -1.57
VPS36YLR417W AUR1P36107 401 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms