RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W AIM14P53109 570 aa10.09□□□□□ -0.79
SHH4YLR164W ADE12P80210 433 aaKnown RBP10.09□□□□□ -0.79
SHH4YLR164W RSC2Q06488 889 aa10.09□□□□□ -0.79
SHH4YLR164W SCH9P11792 824 aaKnown RBP10.08□□□□□ -0.8
SHH4YLR164W DCC1P25559 380 aa10.08□□□□□ -0.8
SHH4YLR164W PHO11P35842 467 aa10.08□□□□□ -0.8
SHH4YLR164W TFA2P36145 328 aa10.08□□□□□ -0.8
SHH4YLR164W MRP21P38175 177 aa10.08□□□□□ -0.8
SHH4YLR164W PHO12P38693 467 aa10.08□□□□□ -0.8
SHH4YLR164W GND1P38720 489 aaKnown RBP10.08□□□□□ -0.8
SHH4YLR164W YHL041WP38730 149 aa10.08□□□□□ -0.8
SHH4YLR164W LIN1P38852 340 aaPredicted RBP10.08□□□□□ -0.8
SHH4YLR164W DUN1P39009 513 aa10.08□□□□□ -0.8
SHH4YLR164W YJL206CP39529 758 aa10.08□□□□□ -0.8
SHH4YLR164W SSP120P39931 234 aaKnown RBP10.08□□□□□ -0.8
SHH4YLR164W MGS1P40151 587 aa10.08□□□□□ -0.8
SHH4YLR164W LIA1P47120 325 aaKnown RBP10.08□□□□□ -0.8
SHH4YLR164W COG1P53079 417 aa10.08□□□□□ -0.8
SHH4YLR164W IPI3P53877 555 aa10.08□□□□□ -0.8
SHH4YLR164W RSB1Q08417 382 aa10.08□□□□□ -0.8
SHH4YLR164W VHS3Q08438 674 aa10.08□□□□□ -0.8
SHH4YLR164W SEC63P14906 663 aa10.07□□□□□ -0.8
SHH4YLR164W NSP1P14907 823 aaKnown RBP10.07□□□□□ -0.8
SHH4YLR164W AAD3P25612 363 aa10.07□□□□□ -0.8
SHH4YLR164W PPZ1P26570 692 aa10.07□□□□□ -0.8
SHH4YLR164W OXP1P28273 1286 aa10.07□□□□□ -0.8
SHH4YLR164W KIP2P28743 706 aa10.07□□□□□ -0.8
SHH4YLR164W AEP1P32493 518 aa10.07□□□□□ -0.8
SHH4YLR164W RDH54P38086 958 aa10.07□□□□□ -0.8
SHH4YLR164W REV7P38927 245 aa10.07□□□□□ -0.8
SHH4YLR164W RPL34BP40525 121 aaKnown RBP10.07□□□□□ -0.8
SHH4YLR164W CHS6P40955 746 aa10.07□□□□□ -0.8
SHH4YLR164W REF2P42073 533 aaPredicted RBP10.07□□□□□ -0.8
SHH4YLR164W AIM23P47015 356 aa10.07□□□□□ -0.8
SHH4YLR164W EMC4P53073 190 aa10.07□□□□□ -0.8
SHH4YLR164W VAC7P53950 1165 aa10.07□□□□□ -0.8
SHH4YLR164W APC9Q12107 265 aa10.07□□□□□ -0.8
SHH4YLR164W LEU1P07264 779 aaKnown RBP10.06□□□□□ -0.8
SHH4YLR164W BET2P20133 325 aa10.06□□□□□ -0.8
SHH4YLR164W YSP3P25036 478 aa10.06□□□□□ -0.8
SHH4YLR164W SLD2P34252 453 aa10.06□□□□□ -0.8
SHH4YLR164W SCD5P34758 872 aa10.06□□□□□ -0.8
SHH4YLR164W RRP14P36080 434 aaKnown RBP10.06□□□□□ -0.8
SHH4YLR164W PHO89P38361 574 aa10.06□□□□□ -0.8
SHH4YLR164W HOS4P40480 1083 aa10.06□□□□□ -0.8
SHH4YLR164W YGL140CP53120 1219 aa10.06□□□□□ -0.8
SHH4YLR164W NOP15P53927 220 aaPredicted RBP10.06□□□□□ -0.8
SHH4YLR164W RSC4Q02206 625 aa10.06□□□□□ -0.8
SHH4YLR164W SYT1Q06836 1226 aa10.06□□□□□ -0.8
SHH4YLR164W DAP1Q12091 152 aa10.06□□□□□ -0.8
SHH4YLR164W RIB2Q12362 591 aaKnown RBP10.06□□□□□ -0.8
SHH4YLR164W KCS1Q12494 1050 aa10.06□□□□□ -0.8
SHH4YLR164W STE2D6VTK4 431 aa10.05□□□□□ -0.8
SHH4YLR164W RPS14AP06367 137 aaKnown RBP10.05□□□□□ -0.8
SHH4YLR164W SPS1P08458 490 aa10.05□□□□□ -0.8
SHH4YLR164W MPH2P0CD99 609 aa10.05□□□□□ -0.8
SHH4YLR164W GCY1P14065 312 aaKnown RBP RIP-Chip data10.05□□□□□ -0.8not detected
SHH4YLR164W BAS1P22035 811 aa10.05□□□□□ -0.8
SHH4YLR164W PHO3P24031 467 aa10.05□□□□□ -0.8
SHH4YLR164W HRR25P29295 494 aaKnown RBP10.05□□□□□ -0.8
SHH4YLR164W MRPL9P31334 269 aa10.05□□□□□ -0.8
SHH4YLR164W IMP3P32899 183 aaPredicted RBP10.05□□□□□ -0.8
SHH4YLR164W LOS1P33418 1100 aaPredicted RBP10.05□□□□□ -0.8
SHH4YLR164W CRP1P38845 465 aaKnown RBP10.05□□□□□ -0.8
SHH4YLR164W RPS14BP39516 138 aaKnown RBP10.05□□□□□ -0.8
SHH4YLR164W SFB2P53953 876 aa10.05□□□□□ -0.8
SHH4YLR164W TFB2Q02939 513 aa10.05□□□□□ -0.8
SHH4YLR164W RPN9Q04062 393 aaKnown RBP10.05□□□□□ -0.8
SHH4YLR164W TRE2Q08693 809 aa10.05□□□□□ -0.8
SHH4YLR164W UPC2Q12151 913 aa10.05□□□□□ -0.8
SHH4YLR164W STB3Q12427 513 aa10.05□□□□□ -0.8
SHH4YLR164W RGS2Q99188 309 aa10.05□□□□□ -0.8
SHH4YLR164W CCH1P50077 2039 aa10.05□□□□□ -0.8
SHH4YLR164W SGF29P25554 259 aa10.04□□□□□ -0.8
SHH4YLR164W YCR099CP25657 155 aa10.04□□□□□ -0.8
SHH4YLR164W MSH2P25847 964 aa10.04□□□□□ -0.8
SHH4YLR164W GCD11P32481 527 aaKnown RBP10.04□□□□□ -0.8
SHH4YLR164W RIM2P38127 377 aa10.04□□□□□ -0.8
SHH4YLR164W MRX1P40050 688 aa10.04□□□□□ -0.8
SHH4YLR164W RGI2P40188 164 aa10.04□□□□□ -0.8
SHH4YLR164W PEX8P53248 589 aa10.04□□□□□ -0.8
SHH4YLR164W YTP1P53584 459 aa10.04□□□□□ -0.8
SHH4YLR164W ARP4P80428 489 aa10.04□□□□□ -0.8
SHH4YLR164W CSN9Q03981 162 aa10.04□□□□□ -0.8
SHH4YLR164W CHS5Q12114 671 aaKnown RBP10.04□□□□□ -0.8
SHH4YLR164W IMG2P25642 146 aaPredicted RBP10.03□□□□□ -0.8
SHH4YLR164W PYC2P32327 1180 aaKnown RBP10.03□□□□□ -0.8
SHH4YLR164W RIM1P32445 135 aaKnown RBP10.03□□□□□ -0.8
SHH4YLR164W RRN3P36070 627 aa10.03□□□□□ -0.8
SHH4YLR164W MNN1P39106 762 aa10.03□□□□□ -0.8
SHH4YLR164W TIM17P39515 158 aa10.03□□□□□ -0.8
SHH4YLR164W RAD26P40352 1085 aa10.03□□□□□ -0.8
SHH4YLR164W YIR007WP40566 764 aa10.03□□□□□ -0.8
SHH4YLR164W MAD3P47074 515 aa10.03□□□□□ -0.8
SHH4YLR164W MNT2P53059 558 aa10.03□□□□□ -0.8
SHH4YLR164W YNR065CP53751 1116 aa10.03□□□□□ -0.8
SHH4YLR164W PRM1P53835 661 aa10.03□□□□□ -0.8
SHH4YLR164W ORC3P54790 616 aa10.03□□□□□ -0.8
SHH4YLR164W PET117Q02771 107 aa10.03□□□□□ -0.8
SHH4YLR164W YPR114WQ06107 315 aa10.03□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms