RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C SSP120P39931 234 aaKnown RBP2.54□□□□□ -2
RPL40BYKR094C YJR142WP47173 342 aa2.54□□□□□ -2
RPL40BYKR094C SPC105P53148 917 aa2.54□□□□□ -2
RPL40BYKR094C YNL181WP53878 407 aa2.54□□□□□ -2
RPL40BYKR094C ADD37Q03233 198 aa2.54□□□□□ -2
RPL40BYKR094C DAP1Q12091 152 aa2.54□□□□□ -2
RPL40BYKR094C COX11P19516 300 aaKnown RBP2.53□□□□□ -2
RPL40BYKR094C SWC3P31376 625 aa2.53□□□□□ -2
RPL40BYKR094C PRO3P32263 286 aaKnown RBP2.53□□□□□ -2
RPL40BYKR094C NIT2P47016 307 aa2.53□□□□□ -2
RPL40BYKR094C HOL1P53389 586 aa2.53□□□□□ -2
RPL40BYKR094C ESF2P53743 316 aaKnown RBP2.53□□□□□ -2
RPL40BYKR094C YNL034WP53963 612 aa2.53□□□□□ -2
RPL40BYKR094C YBR255C-AQ3E776 120 aa2.53□□□□□ -2
RPL40BYKR094C RIM2P38127 377 aa2.52□□□□□ -2.01
RPL40BYKR094C AVT5P38176 459 aa2.52□□□□□ -2.01
RPL40BYKR094C YGL081WP53156 320 aa2.52□□□□□ -2.01
RPL40BYKR094C BSC1Q12140 328 aa2.52□□□□□ -2.01
RPL40BYKR094C RPN2P32565 945 aaKnown RBP2.51□□□□□ -2.01
RPL40BYKR094C TRS65P32893 560 aa2.51□□□□□ -2.01
RPL40BYKR094C HES1P35843 434 aa2.51□□□□□ -2.01
RPL40BYKR094C MRPL4P36517 319 aa2.51□□□□□ -2.01
RPL40BYKR094C FUN12P39730 1002 aaKnown RBP2.51□□□□□ -2.01
RPL40BYKR094C SHE10P53075 577 aa2.51□□□□□ -2.01
RPL40BYKR094C YGR079WP53249 370 aa2.51□□□□□ -2.01
RPL40BYKR094C TRI1Q05024 226 aa2.51□□□□□ -2.01
RPL40BYKR094C UTP21Q06078 939 aaPredicted RBP2.51□□□□□ -2.01
RPL40BYKR094C PSF3Q12146 194 aa2.51□□□□□ -2.01
RPL40BYKR094C CYB2P00175 591 aa2.5□□□□□ -2.01
RPL40BYKR094C PDR3P33200 976 aa2.5□□□□□ -2.01
RPL40BYKR094C PCA1P38360 1216 aa2.5□□□□□ -2.01
RPL40BYKR094C YEL068CP39977 110 aa2.5□□□□□ -2.01
RPL40BYKR094C UBX6P47049 396 aa2.5□□□□□ -2.01
RPL40BYKR094C SLD3P53135 668 aa2.5□□□□□ -2.01
RPL40BYKR094C VPS64Q03944 604 aa2.5□□□□□ -2.01
RPL40BYKR094C YDR109CQ04585 715 aa2.5□□□□□ -2.01
RPL40BYKR094C MSH1P25846 959 aa2.49□□□□□ -2.01
RPL40BYKR094C HEM12P32347 362 aaPredicted RBP2.49□□□□□ -2.01
RPL40BYKR094C YNL234WP53857 426 aa2.49□□□□□ -2.01
RPL40BYKR094C AIM6Q07716 390 aa2.49□□□□□ -2.01
RPL40BYKR094C BSC6Q08280 497 aa2.49□□□□□ -2.01
RPL40BYKR094C SUI3P09064 285 aaKnown RBP2.48□□□□□ -2.01
RPL40BYKR094C CBS2P14905 389 aa2.48□□□□□ -2.01
RPL40BYKR094C GUK1P15454 187 aaKnown RBP2.48□□□□□ -2.01
RPL40BYKR094C BUD14P27637 709 aa2.48□□□□□ -2.01
RPL40BYKR094C SCS2P40075 244 aaKnown RBP2.48□□□□□ -2.01
RPL40BYKR094C EMP65P40085 556 aa2.48□□□□□ -2.01
RPL40BYKR094C YDR415CQ04033 374 aaPredicted RBP2.48□□□□□ -2.01
RPL40BYKR094C YLR455WQ06188 304 aa2.48□□□□□ -2.01
RPL40BYKR094C PPT2Q12036 173 aa2.48□□□□□ -2.01
RPL40BYKR094C MRP2P10663 115 aaPredicted RBP2.47□□□□□ -2.01
RPL40BYKR094C SWH1P35845 1188 aa2.47□□□□□ -2.01
RPL40BYKR094C YPK3P38070 525 aa2.47□□□□□ -2.01
RPL40BYKR094C MKT1P40850 830 aaKnown RBP2.47□□□□□ -2.01
RPL40BYKR094C ZAP1P47043 880 aa2.47□□□□□ -2.01
RPL40BYKR094C PEX15Q08215 383 aa2.47□□□□□ -2.01
RPL40BYKR094C TGL1P34163 548 aa2.46□□□□□ -2.02
RPL40BYKR094C YJR061WP40355 935 aa2.46□□□□□ -2.02
RPL40BYKR094C YIR014WP40570 242 aa2.46□□□□□ -2.02
RPL40BYKR094C IMA5P40884 581 aa2.46□□□□□ -2.02
RPL40BYKR094C ASI1P54074 624 aa2.46□□□□□ -2.02
RPL40BYKR094C EKI1Q03764 534 aa2.46□□□□□ -2.02
RPL40BYKR094C RSF1Q05043 376 aa2.46□□□□□ -2.02
RPL40BYKR094C MCP2Q06567 569 aa2.46□□□□□ -2.02
RPL40BYKR094C YLR049CQ12110 428 aa2.46□□□□□ -2.02
RPL40BYKR094C CSR2Q12734 1121 aa2.46□□□□□ -2.02
RPL40BYKR094C VAS1P07806 1104 aaKnown RBP2.45□□□□□ -2.02
RPL40BYKR094C PCT1P13259 424 aa2.45□□□□□ -2.02
RPL40BYKR094C GLN3P18494 730 aa2.45□□□□□ -2.02
RPL40BYKR094C PHO3P24031 467 aa2.45□□□□□ -2.02
RPL40BYKR094C LDB16P25587 256 aa2.45□□□□□ -2.02
RPL40BYKR094C SPG5P42933 373 aa2.45□□□□□ -2.02
RPL40BYKR094C ADE16P54113 591 aaKnown RBP2.45□□□□□ -2.02
RPL40BYKR094C CRD1Q07560 283 aa2.45□□□□□ -2.02
RPL40BYKR094C ICL2Q12031 575 aa2.45□□□□□ -2.02
RPL40BYKR094C YGR161W-CQ3E744 92 aa2.45□□□□□ -2.02
RPL40BYKR094C ADH4P10127 382 aa2.44□□□□□ -2.02
RPL40BYKR094C PGI1P12709 554 aaKnown RBP2.44□□□□□ -2.02
RPL40BYKR094C RTS1P38903 757 aa2.44□□□□□ -2.02
RPL40BYKR094C RTS2P40962 232 aa2.44□□□□□ -2.02
RPL40BYKR094C ASK10P48361 1146 aa2.44□□□□□ -2.02
RPL40BYKR094C MSY1P48527 492 aa2.44□□□□□ -2.02
RPL40BYKR094C SGF73P53165 657 aa2.44□□□□□ -2.02
RPL40BYKR094C BOR1P53838 576 aa2.44□□□□□ -2.02
RPL40BYKR094C AAD4Q07747 329 aa2.44□□□□□ -2.02
RPL40BYKR094C NUR1Q12066 484 aa2.44□□□□□ -2.02
RPL40BYKR094C STE50P25344 346 aa2.43□□□□□ -2.02
RPL40BYKR094C YLF2P38746 405 aa2.43□□□□□ -2.02
RPL40BYKR094C PHM8P40025 321 aa2.43□□□□□ -2.02
RPL40BYKR094C IAH1P41734 238 aa2.43□□□□□ -2.02
RPL40BYKR094C FET5P43561 622 aa2.43□□□□□ -2.02
RPL40BYKR094C SLX4Q12098 748 aa2.43□□□□□ -2.02
RPL40BYKR094C YLL056CQ12177 298 aa2.43□□□□□ -2.02
RPL40BYKR094C EDE1P34216 1381 aa2.42□□□□□ -2.02
RPL40BYKR094C TAF5P38129 798 aa2.42□□□□□ -2.02
RPL40BYKR094C RRT2P38332 387 aa2.42□□□□□ -2.02
RPL40BYKR094C GTB1Q04924 702 aa2.42□□□□□ -2.02
RPL40BYKR094C TRE2Q08693 809 aa2.42□□□□□ -2.02
RPL40BYKR094C RVB2Q12464 471 aaKnown RBP2.42□□□□□ -2.02
RPL40BYKR094C URK1P27515 501 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms