RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W STP1Q00947 519 aa5.6□□□□□ -1.51
CBF1YJR060W MET14Q02196 202 aa5.6□□□□□ -1.51
CBF1YJR060W SNU56Q03782 492 aaKnown RBP5.6□□□□□ -1.51
CBF1YJR060W LRS4Q04087 347 aaKnown RBP5.6□□□□□ -1.51
CBF1YJR060W YDR338CQ05497 695 aa5.6□□□□□ -1.51
CBF1YJR060W YLR287CQ05881 355 aa5.6□□□□□ -1.51
CBF1YJR060W PIG1Q06216 648 aa5.6□□□□□ -1.51
CBF1YJR060W YDL121CQ07541 149 aa5.6□□□□□ -1.51
CBF1YJR060W ABP140Q08641 628 aaKnown RBP5.6□□□□□ -1.51
CBF1YJR060W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
CBF1YJR060W TAF10Q12030 206 aa5.6□□□□□ -1.51
CBF1YJR060W RPS9AO13516 197 aaKnown RBP5.59□□□□□ -1.51
CBF1YJR060W DIF1O13577 133 aa5.59□□□□□ -1.51
CBF1YJR060W RPS3P05750 240 aaKnown RBP5.59□□□□□ -1.51
CBF1YJR060W CDC42P19073 191 aa5.59□□□□□ -1.51
CBF1YJR060W DAL3P32459 195 aa5.59□□□□□ -1.51
CBF1YJR060W CBF2P32504 956 aa5.59□□□□□ -1.51
CBF1YJR060W XRS2P33301 854 aa5.59□□□□□ -1.51
CBF1YJR060W MPE1P35728 441 aaKnown RBP5.59□□□□□ -1.51
CBF1YJR060W EBP2P36049 427 aaKnown RBP5.59□□□□□ -1.51
CBF1YJR060W CEP3P40969 608 aa5.59□□□□□ -1.51
CBF1YJR060W RET2P43621 546 aa5.59□□□□□ -1.51
CBF1YJR060W TAF1P46677 1066 aa5.59□□□□□ -1.51
CBF1YJR060W UBC9P50623 157 aaPredicted RBP5.59□□□□□ -1.51
CBF1YJR060W ADA2Q02336 434 aa5.59□□□□□ -1.51
CBF1YJR060W PPM1Q04081 328 aa5.59□□□□□ -1.51
CBF1YJR060W MRI1Q06489 411 aaKnown RBP5.59□□□□□ -1.51
CBF1YJR060W CDA1Q06702 301 aa5.59□□□□□ -1.51
CBF1YJR060W CWC2Q12046 339 aaPredicted RBP5.59□□□□□ -1.51
CBF1YJR060W YPR027CQ12079 277 aa5.59□□□□□ -1.51
CBF1YJR060W ECM3Q99252 613 aa5.59□□□□□ -1.51
CBF1YJR060W AI5_BETAQ9ZZX0 354 aa5.59□□□□□ -1.51
CBF1YJR060W YLR358CO13565 187 aa5.58□□□□□ -1.52
CBF1YJR060W GAL1P04385 528 aa5.58□□□□□ -1.52
CBF1YJR060W TPK1P06244 397 aa5.58□□□□□ -1.52
CBF1YJR060W SNF1P06782 633 aaKnown RBP5.58□□□□□ -1.52
CBF1YJR060W RRT12P25381 491 aa5.58□□□□□ -1.52
CBF1YJR060W YCL002CP25565 263 aa5.58□□□□□ -1.52
CBF1YJR060W EMC1P25574 760 aa5.58□□□□□ -1.52
CBF1YJR060W CDC20P26309 610 aa5.58□□□□□ -1.52
CBF1YJR060W GAC1P28006 793 aa5.58□□□□□ -1.52
CBF1YJR060W SEC65P29478 273 aa5.58□□□□□ -1.52
CBF1YJR060W CCR4P31384 837 aaKnown RBP5.58□□□□□ -1.52
CBF1YJR060W SPC110P32380 944 aa5.58□□□□□ -1.52
CBF1YJR060W EFB1P32471 206 aaKnown RBP5.58□□□□□ -1.52
CBF1YJR060W NOP4P37838 685 aaKnown RBP5.58□□□□□ -1.52
CBF1YJR060W YMC2P38087 329 aa5.58□□□□□ -1.52
CBF1YJR060W RFS1P38234 210 aaKnown RBP5.58□□□□□ -1.52
CBF1YJR060W SMC2P38989 1170 aaKnown RBP5.58□□□□□ -1.52
CBF1YJR060W HXT16P47185 567 aa5.58□□□□□ -1.52
CBF1YJR060W NPY1P53164 384 aa5.58□□□□□ -1.52
CBF1YJR060W PNG1Q02890 363 aa5.58□□□□□ -1.52
CBF1YJR060W TSR1Q07381 788 aaKnown RBP5.58□□□□□ -1.52
CBF1YJR060W APM4Q99186 491 aa5.58□□□□□ -1.52
CBF1YJR060W CDC33P07260 213 aaKnown RBP5.57□□□□□ -1.52
CBF1YJR060W MAS1P10507 462 aa5.57□□□□□ -1.52
CBF1YJR060W CLC1P17891 233 aa5.57□□□□□ -1.52
CBF1YJR060W IME1P21190 360 aa5.57□□□□□ -1.52
CBF1YJR060W SAT4P25333 603 aaKnown RBP5.57□□□□□ -1.52
CBF1YJR060W PTP2P29461 750 aa5.57□□□□□ -1.52
CBF1YJR060W BIT2P38346 545 aa5.57□□□□□ -1.52
CBF1YJR060W RIM4P38741 713 aa5.57□□□□□ -1.52
CBF1YJR060W FAF1P40546 346 aaPredicted RBP5.57□□□□□ -1.52
CBF1YJR060W MET12P46151 657 aa5.57□□□□□ -1.52
CBF1YJR060W STB4P50104 949 aa5.57□□□□□ -1.52
CBF1YJR060W TAN1P53072 289 aaPredicted RBP5.57□□□□□ -1.52
CBF1YJR060W SPC105P53148 917 aa5.57□□□□□ -1.52
CBF1YJR060W ECM9Q02202 377 aa5.57□□□□□ -1.52
CBF1YJR060W MZM1Q03429 123 aaPredicted RBP5.57□□□□□ -1.52
CBF1YJR060W YAP6Q03935 383 aa5.57□□□□□ -1.52
CBF1YJR060W CRR1Q05790 422 aa5.57□□□□□ -1.52
CBF1YJR060W CDD1Q06549 142 aa5.57□□□□□ -1.52
CBF1YJR060W OPY2Q06810 360 aa5.57□□□□□ -1.52
CBF1YJR060W HMI1Q12039 706 aa5.57□□□□□ -1.52
CBF1YJR060W SPE3Q12074 293 aaKnown RBP5.57□□□□□ -1.52
CBF1YJR060W RRP6Q12149 733 aaKnown RBP5.57□□□□□ -1.52
CBF1YJR060W RPP2AP05319 106 aaKnown RBP5.56□□□□□ -1.52
CBF1YJR060W CHS1P08004 1131 aa5.56□□□□□ -1.52
CBF1YJR060W SPE1P08432 466 aa5.56□□□□□ -1.52
CBF1YJR060W RNR1P21524 888 aaKnown RBP5.56□□□□□ -1.52
CBF1YJR060W MIH1P23748 554 aa5.56□□□□□ -1.52
CBF1YJR060W PGS1P25578 521 aa5.56□□□□□ -1.52
CBF1YJR060W CSG2P35206 410 aa5.56□□□□□ -1.52
CBF1YJR060W SET5P38890 526 aaKnown RBP5.56□□□□□ -1.52
CBF1YJR060W DSE1P40077 573 aa5.56□□□□□ -1.52
CBF1YJR060W EMP65P40085 556 aa5.56□□□□□ -1.52
CBF1YJR060W POL31P46957 487 aa5.56□□□□□ -1.52
CBF1YJR060W RAI1P53063 387 aaKnown RBP5.56□□□□□ -1.52
CBF1YJR060W ERV41Q04651 352 aa5.56□□□□□ -1.52
CBF1YJR060W ADY3Q07732 790 aa5.56□□□□□ -1.52
CBF1YJR060W APC5Q08683 685 aa5.56□□□□□ -1.52
CBF1YJR060W LEA1Q08963 238 aaPredicted RBP5.56□□□□□ -1.52
CBF1YJR060W NEW1Q08972 1196 aaKnown RBP5.56□□□□□ -1.52
CBF1YJR060W YBR182C-AQ8TGU6 64 aa5.56□□□□□ -1.52
CBF1YJR060W HIS5P07172 385 aa5.55□□□□□ -1.52
CBF1YJR060W DAL2P25335 343 aa5.55□□□□□ -1.52
CBF1YJR060W MRS6P32864 603 aaKnown RBP5.55□□□□□ -1.52
CBF1YJR060W TKL2P33315 681 aa5.55□□□□□ -1.52
CBF1YJR060W AGP2P38090 596 aa5.55□□□□□ -1.52
CBF1YJR060W IES5P40060 125 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms