RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	YIR007W	P40566	764 aa		3.45	□□□□□ -1.86
CCM1	YGR150C	INA22	P40576	216 aa		3.45	□□□□□ -1.86
CCM1	YGR150C	YGR066C	P53242	292 aa		3.45	□□□□□ -1.86
CCM1	YGR150C	NCE103	P53615	221 aa		3.45	□□□□□ -1.86
CCM1	YGR150C	DSE4	P53753	1117 aa		3.45	□□□□□ -1.86
CCM1	YGR150C	INP2	Q03824	705 aa		3.45	□□□□□ -1.86
CCM1	YGR150C	PEX19	Q07418	342 aa		3.45	□□□□□ -1.86
CCM1	YGR150C	DCI1	Q08558	271 aa		3.45	□□□□□ -1.86
CCM1	YGR150C	HRK1	Q08732	759 aa	Known RBP	3.45	□□□□□ -1.86
CCM1	YGR150C	TCO89	Q08921	799 aa		3.45	□□□□□ -1.86
CCM1	YGR150C	LYS21	Q12122	440 aa	Known RBP	3.45	□□□□□ -1.86
CCM1	YGR150C	LEU9	Q12166	604 aa	Known RBP	3.45	□□□□□ -1.86
CCM1	YGR150C	TY3A-G	Q12173	290 aa		3.45	□□□□□ -1.86
CCM1	YGR150C	TY3A-I	Q99219	290 aa		3.45	□□□□□ -1.86
CCM1	YGR150C	ATP2	P00830	511 aa	Known RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	RPL6B	P05739	176 aa	Known RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	PET122	P10355	254 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	BUD5	P25300	642 aa	Predicted RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	SPC110	P32380	944 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	ECM21	P38167	1117 aa	Known RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	PRK1	P40494	810 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	LCL3	P53153	274 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	PUS2	P53167	370 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	MDR1	P53258	950 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	DUS1	P53759	423 aa	Known RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	RCM1	P53972	490 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	RPL6A	Q02326	176 aa	Known RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	MDM36	Q06820	579 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	TMA16	Q08687	178 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	NUS1	Q12063	375 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	ATG29	Q12092	213 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	UBX3	Q12229	455 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	SYN8	P31377	255 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	EFB1	P32471	206 aa	Known RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	PET127	P32606	800 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	YSC84	P32793	468 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	RPT5	P33297	434 aa	Known RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	KTR3	P38130	404 aa	Predicted RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	MMS4	P38257	691 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	TDP1	P38319	544 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	RRT2	P38332	387 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	ERC1	P38767	581 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	WSS1	P38838	269 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	YMR124W	P39523	943 aa	Known RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	AIM10	P39965	576 aa	Known RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	SLZ1	P40167	298 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	ZAP1	P47043	880 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	TAH11	P47112	604 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	PAN2	P53010	1115 aa	Predicted RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	HOP2	P53187	214 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	TNA1	P53322	534 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	SOK2	P53438	785 aa	Predicted RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	DCP2	P53550	970 aa	Known RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	KAP120	Q02932	1032 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	MUB1	Q03162	620 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	TRS31	Q03337	283 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	VPS64	Q03944	604 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	RQC1	Q05468	723 aa	Known RBP	3.44	□□□□□ -1.86
CCM1	YGR150C	AIM6	Q07716	390 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	YPT6	Q99260	215 aa		3.44	□□□□□ -1.86
CCM1	YGR150C	ERS1	P17261	260 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	ERG6	P25087	383 aa	Known RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	SNT1	P25357	1226 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	SPS22	P25380	463 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	DOA4	P32571	926 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	MRE11	P32829	692 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	AUR1	P36107	401 aa	Predicted RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	RFC3	P38629	340 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	GIP4	P39732	760 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	VFA1	P40080	203 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	LRO1	P40345	661 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.43	□□□□□ -1.86	not detected
CCM1	YGR150C	LIA1	P47120	325 aa	Known RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	RAI1	P53063	387 aa	Known RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	YMR074C	Q04773	145 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	RCL1	Q08096	367 aa	Predicted RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	UAF30	Q08747	228 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	BUD7	Q08754	746 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	YIL002W-A	Q3E7Z5	69 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	TDH1	P00360	332 aa	Known RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	HMG2	P12684	1045 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	TAL1	P15019	335 aa	Known RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	FRS1	P15624	595 aa	Known RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	VPS3	P23643	1011 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	CAD1	P24813	409 aa	Known RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	RPS7A	P26786	190 aa	Known RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	YPT7	P32939	208 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	KES1	P35844	434 aa	Known RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	NNK1	P36003	928 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	NTC20	P38302	140 aa	Predicted RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	RRM3	P38766	723 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	CCT6	P39079	546 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	ZRG8	P40021	1076 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	GID8	P40208	455 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	YJL070C	P40361	888 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	GCN20	P43535	752 aa	Known RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	GIM3	P53900	129 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	AQR1	P53943	586 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	MRPL1	Q04599	285 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	ADE13	Q05911	482 aa	Known RBP	3.43	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms