RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W LNP1P38878 278 aa5.14□□□□□ -1.59
DEG1YFL001W SPO22P40511 975 aa5.14□□□□□ -1.59
DEG1YFL001W PHO23P50947 330 aa5.14□□□□□ -1.59
DEG1YFL001W NMA2P53204 395 aa5.14□□□□□ -1.59
DEG1YFL001W RPT6Q01939 405 aaKnown RBP5.14□□□□□ -1.59
DEG1YFL001W ARP9Q05123 467 aa5.14□□□□□ -1.59
DEG1YFL001W MET17P06106 444 aa5.13□□□□□ -1.59
DEG1YFL001W STE4P18851 423 aa5.13□□□□□ -1.59
DEG1YFL001W OCA4P25366 362 aa5.13□□□□□ -1.59
DEG1YFL001W LOT5P34234 306 aa5.13□□□□□ -1.59
DEG1YFL001W PEX5P35056 612 aa5.13□□□□□ -1.59
DEG1YFL001W DEF1P35732 738 aaKnown RBP5.13□□□□□ -1.59
DEG1YFL001W KTR3P38130 404 aaPredicted RBP5.13□□□□□ -1.59
DEG1YFL001W YPT10P38146 199 aa5.13□□□□□ -1.59
DEG1YFL001W RTS1P38903 757 aa5.13□□□□□ -1.59
DEG1YFL001W LSM5P40089 93 aaKnown RBP5.13□□□□□ -1.59
DEG1YFL001W AXL1P40851 1208 aa5.13□□□□□ -1.59
DEG1YFL001W YGR079WP53249 370 aa5.13□□□□□ -1.59
DEG1YFL001W YGR250CP53316 781 aaKnown RBP5.13□□□□□ -1.59
DEG1YFL001W SXM1Q04175 944 aaKnown RBP5.13□□□□□ -1.59
DEG1YFL001W TGS1Q12052 315 aa5.13□□□□□ -1.59
DEG1YFL001W ESP1Q03018 1630 aa5.13□□□□□ -1.59
DEG1YFL001W LCB1P25045 558 aaKnown RBP5.12□□□□□ -1.59
DEG1YFL001W HCM1P25364 564 aa5.12□□□□□ -1.59
DEG1YFL001W RPC53P25441 422 aa5.12□□□□□ -1.59
DEG1YFL001W PXA2P34230 853 aa5.12□□□□□ -1.59
DEG1YFL001W BYE1P36106 594 aa5.12□□□□□ -1.59
DEG1YFL001W PPS1P38148 807 aa5.12□□□□□ -1.59
DEG1YFL001W JHD1P40034 492 aa5.12□□□□□ -1.59
DEG1YFL001W IME4P41833 600 aa5.12□□□□□ -1.59
DEG1YFL001W YNL092WP53934 400 aa5.12□□□□□ -1.59
DEG1YFL001W SSL2Q00578 843 aa5.12□□□□□ -1.59
DEG1YFL001W YLR352WQ06479 807 aa5.12□□□□□ -1.59
DEG1YFL001W MRI1Q06489 411 aaKnown RBP5.12□□□□□ -1.59
DEG1YFL001W NTO1Q12311 748 aa5.12□□□□□ -1.59
DEG1YFL001W YOR019WQ99248 730 aa5.12□□□□□ -1.59
DEG1YFL001W MYO2P19524 1574 aaKnown RBP5.12□□□□□ -1.59
DEG1YFL001W AAC1P04710 309 aa5.11□□□□□ -1.59
DEG1YFL001W YPK1P12688 680 aaKnown RBP5.11□□□□□ -1.59
DEG1YFL001W CBS1P14066 229 aa5.11□□□□□ -1.59
DEG1YFL001W PDX1P16451 410 aa5.11□□□□□ -1.59
DEG1YFL001W MTH1P35198 433 aa5.11□□□□□ -1.59
DEG1YFL001W ARG2P40360 574 aa5.11□□□□□ -1.59
DEG1YFL001W DJP1P40564 432 aa5.11□□□□□ -1.59
DEG1YFL001W YML6P51998 286 aa5.11□□□□□ -1.59
DEG1YFL001W BAG7Q12128 409 aa5.11□□□□□ -1.59
DEG1YFL001W RTN2Q12443 393 aa5.11□□□□□ -1.59
DEG1YFL001W LAM4P38800 1345 aa5.1□□□□□ -1.59
DEG1YFL001W AMD2P22580 549 aa5.1□□□□□ -1.59
DEG1YFL001W RFA2P26754 273 aaKnown RBP5.1□□□□□ -1.59
DEG1YFL001W PEP3P27801 918 aa5.1□□□□□ -1.59
DEG1YFL001W UBP13P38187 747 aa5.1□□□□□ -1.59
DEG1YFL001W SUL1P38359 859 aa5.1□□□□□ -1.59
DEG1YFL001W MAM1P40065 302 aa5.1□□□□□ -1.59
DEG1YFL001W RGI2P40188 164 aa5.1□□□□□ -1.59
DEG1YFL001W NDC80P40460 691 aa5.1□□□□□ -1.59
DEG1YFL001W GLO1P50107 326 aa5.1□□□□□ -1.59
DEG1YFL001W SMX3P54999 86 aaPredicted RBP5.1□□□□□ -1.59
DEG1YFL001W TRS23Q03784 219 aa5.1□□□□□ -1.59
DEG1YFL001W YMR155WQ03795 547 aa5.1□□□□□ -1.59
DEG1YFL001W SKG3Q06315 1026 aa5.1□□□□□ -1.59
DEG1YFL001W YDL242WQ07746 117 aa5.1□□□□□ -1.59
DEG1YFL001W CRT10Q08226 957 aa5.1□□□□□ -1.59
DEG1YFL001W LYS21Q12122 440 aaKnown RBP5.1□□□□□ -1.59
DEG1YFL001W YPK9Q12697 1472 aa5.1□□□□□ -1.59
DEG1YFL001W YBR085C-AO43137 85 aa5.09□□□□□ -1.59
DEG1YFL001W HSP82P02829 709 aaKnown RBP5.09□□□□□ -1.59
DEG1YFL001W CHO2P05374 869 aaKnown RBP5.09□□□□□ -1.59
DEG1YFL001W CDC15P27636 974 aa5.09□□□□□ -1.59
DEG1YFL001W CTS1P29029 562 aa5.09□□□□□ -1.59
DEG1YFL001W SWI3P32591 825 aa5.09□□□□□ -1.59
DEG1YFL001W MAL33P38157 468 aa5.09□□□□□ -1.59
DEG1YFL001W PIH1P38768 344 aa5.09□□□□□ -1.59
DEG1YFL001W SEC24P40482 926 aaKnown RBP5.09□□□□□ -1.59
DEG1YFL001W INA17Q02888 182 aa5.09□□□□□ -1.59
DEG1YFL001W YML119WQ03208 357 aa5.09□□□□□ -1.59
DEG1YFL001W YDR179W-AQ03983 463 aa5.09□□□□□ -1.59
DEG1YFL001W YDL073WQ07454 984 aa5.09□□□□□ -1.59
DEG1YFL001W YOL073CQ08232 322 aa5.09□□□□□ -1.59
DEG1YFL001W TCO89Q08921 799 aa5.09□□□□□ -1.59
DEG1YFL001W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
DEG1YFL001W SIP1P32578 815 aa5.08□□□□□ -1.6
DEG1YFL001W HES1P35843 434 aa5.08□□□□□ -1.6
DEG1YFL001W AUR1P36107 401 aaPredicted RBP5.08□□□□□ -1.6
DEG1YFL001W GMH1P36125 273 aa5.08□□□□□ -1.6
DEG1YFL001W RPF2P36160 344 aaKnown RBP5.08□□□□□ -1.6
DEG1YFL001W SRP72P38688 640 aaKnown RBP5.08□□□□□ -1.6
DEG1YFL001W ERC1P38767 581 aa5.08□□□□□ -1.6
DEG1YFL001W FUN12P39730 1002 aaKnown RBP5.08□□□□□ -1.6
DEG1YFL001W LAS21P40367 830 aa5.08□□□□□ -1.6
DEG1YFL001W PMT6P42934 759 aa5.08□□□□□ -1.6
DEG1YFL001W NPA3P47122 385 aa5.08□□□□□ -1.6
DEG1YFL001W MSY1P48527 492 aa5.08□□□□□ -1.6
DEG1YFL001W CTR1P49573 406 aa5.08□□□□□ -1.6
DEG1YFL001W YGL036WP53185 909 aaPredicted RBP5.08□□□□□ -1.6
DEG1YFL001W GPN2Q08726 347 aaPredicted RBP5.08□□□□□ -1.6
DEG1YFL001W GET3Q12154 354 aaKnown RBP5.08□□□□□ -1.6
DEG1YFL001W LCB4Q12246 624 aa5.08□□□□□ -1.6
DEG1YFL001W GRX6Q12438 231 aa5.08□□□□□ -1.6
DEG1YFL001W SPE4Q12455 300 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms