RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W ADK2P26364 225 aa5.36□□□□□ -1.55
UBC6YER100W PDB1P32473 366 aaKnown RBP5.36□□□□□ -1.55
UBC6YER100W LIP5P32875 414 aa5.36□□□□□ -1.55
UBC6YER100W YKL100CP34248 587 aa5.36□□□□□ -1.55
UBC6YER100W AUR1P36107 401 aaPredicted RBP5.36□□□□□ -1.55
UBC6YER100W SMF1P38925 575 aa5.36□□□□□ -1.55
UBC6YER100W YEL057CP39983 233 aa5.36□□□□□ -1.55
UBC6YER100W JHD1P40034 492 aa5.36□□□□□ -1.55
UBC6YER100W THI6P41835 540 aa5.36□□□□□ -1.55
UBC6YER100W YGR016WP53209 190 aa5.36□□□□□ -1.55
UBC6YER100W SNF12P53628 566 aa5.36□□□□□ -1.55
UBC6YER100W DAK1P54838 584 aaKnown RBP5.36□□□□□ -1.55
UBC6YER100W CIK1Q01649 594 aa5.36□□□□□ -1.55
UBC6YER100W MEH1Q02205 184 aa5.36□□□□□ -1.55
UBC6YER100W ECM22Q05958 814 aaPredicted RBP5.36□□□□□ -1.55
UBC6YER100W YLR345WQ06137 509 aa5.36□□□□□ -1.55
UBC6YER100W SKG3Q06315 1026 aa5.36□□□□□ -1.55
UBC6YER100W MRI1Q06489 411 aaKnown RBP5.36□□□□□ -1.55
UBC6YER100W TCO89Q08921 799 aa5.36□□□□□ -1.55
UBC6YER100W YER175W-AQ8TGU4 54 aa5.36□□□□□ -1.55
UBC6YER100W YBR085C-AO43137 85 aa5.35□□□□□ -1.55
UBC6YER100W KRR1P25586 316 aaPredicted RBP5.35□□□□□ -1.55
UBC6YER100W CNE1P27825 502 aa5.35□□□□□ -1.55
UBC6YER100W ORC2P32833 620 aa5.35□□□□□ -1.55
UBC6YER100W LOT5P34234 306 aa5.35□□□□□ -1.55
UBC6YER100W UBP11P36026 717 aa5.35□□□□□ -1.55
UBC6YER100W KTR3P38130 404 aaPredicted RBP5.35□□□□□ -1.55
UBC6YER100W CST26P38226 397 aa5.35□□□□□ -1.55
UBC6YER100W ARO9P38840 513 aaPredicted RBP5.35□□□□□ -1.55
UBC6YER100W CCT6P39079 546 aa5.35□□□□□ -1.55
UBC6YER100W RPN11P43588 306 aaKnown RBP5.35□□□□□ -1.55
UBC6YER100W UFO1Q04511 668 aa5.35□□□□□ -1.55
UBC6YER100W TMA10Q06177 86 aa5.35□□□□□ -1.55
UBC6YER100W BMS1Q08965 1183 aaKnown RBP5.35□□□□□ -1.55
UBC6YER100W TGS1Q12052 315 aa5.35□□□□□ -1.55
UBC6YER100W ISA2Q12425 185 aa5.35□□□□□ -1.55
UBC6YER100W SPE4Q12455 300 aa5.35□□□□□ -1.55
UBC6YER100W YOR019WQ99248 730 aa5.35□□□□□ -1.55
UBC6YER100W SPT7P35177 1332 aa5.34□□□□□ -1.55
UBC6YER100W HIS7P33734 552 aaKnown RBP5.34□□□□□ -1.55
UBC6YER100W ELF1P36053 145 aa5.34□□□□□ -1.55
UBC6YER100W APL3P38065 1025 aa5.34□□□□□ -1.55
UBC6YER100W AGP2P38090 596 aa5.34□□□□□ -1.55
UBC6YER100W MAL33P38157 468 aa5.34□□□□□ -1.55
UBC6YER100W SRO77P38163 1010 aa5.34□□□□□ -1.55
UBC6YER100W REG2P38232 338 aa5.34□□□□□ -1.55
UBC6YER100W VID24P38263 362 aa5.34□□□□□ -1.55
UBC6YER100W AIM3P38266 947 aaKnown RBP5.34□□□□□ -1.55
UBC6YER100W LNP1P38878 278 aa5.34□□□□□ -1.55
UBC6YER100W PHM8P40025 321 aa5.34□□□□□ -1.55
UBC6YER100W INP52P50942 1183 aa5.34□□□□□ -1.55
UBC6YER100W STR3P53101 465 aaKnown RBP5.34□□□□□ -1.55
UBC6YER100W YGR151CP53287 111 aa5.34□□□□□ -1.55
UBC6YER100W MFM1Q02783 413 aa5.34□□□□□ -1.55
UBC6YER100W CDA2Q06703 312 aa5.34□□□□□ -1.55
UBC6YER100W RKI1Q12189 258 aa5.34□□□□□ -1.55
UBC6YER100W YPT6Q99260 215 aa5.34□□□□□ -1.55
UBC6YER100W CPA2P03965 1118 aaKnown RBP5.33□□□□□ -1.56
UBC6YER100W AAC1P04710 309 aa5.33□□□□□ -1.56
UBC6YER100W PMA1P05030 918 aaKnown RBP5.33□□□□□ -1.56
UBC6YER100W PRP6P19735 899 aaPredicted RBP5.33□□□□□ -1.56
UBC6YER100W CLB3P24870 427 aa5.33□□□□□ -1.56
UBC6YER100W ERG4P25340 473 aa5.33□□□□□ -1.56
UBC6YER100W POL4P25615 582 aa5.33□□□□□ -1.56
UBC6YER100W HES1P35843 434 aa5.33□□□□□ -1.56
UBC6YER100W MAM1P40065 302 aa5.33□□□□□ -1.56
UBC6YER100W SEC24P40482 926 aaKnown RBP5.33□□□□□ -1.56
UBC6YER100W MSE1P48525 536 aa5.33□□□□□ -1.56
UBC6YER100W YGR079WP53249 370 aa5.33□□□□□ -1.56
UBC6YER100W BUD17P53727 317 aa5.33□□□□□ -1.56
UBC6YER100W CRT10Q08226 957 aa5.33□□□□□ -1.56
UBC6YER100W GPN2Q08726 347 aaPredicted RBP5.33□□□□□ -1.56
UBC6YER100W YPL216WQ08964 1102 aa5.33□□□□□ -1.56
UBC6YER100W RIM20Q12033 661 aa5.33□□□□□ -1.56
UBC6YER100W YLR358CO13565 187 aa5.32□□□□□ -1.56
UBC6YER100W CHO2P05374 869 aaKnown RBP5.32□□□□□ -1.56
UBC6YER100W YPT10P38146 199 aa5.32□□□□□ -1.56
UBC6YER100W YHR097CP38809 366 aaKnown RBP5.32□□□□□ -1.56
UBC6YER100W LTP1P40347 161 aa5.32□□□□□ -1.56
UBC6YER100W MSY1P48527 492 aa5.32□□□□□ -1.56
UBC6YER100W YIP4P53093 235 aa5.32□□□□□ -1.56
UBC6YER100W YGL036WP53185 909 aaPredicted RBP5.32□□□□□ -1.56
UBC6YER100W DIP5P53388 608 aa5.32□□□□□ -1.56
UBC6YER100W DCP2P53550 970 aaKnown RBP5.32□□□□□ -1.56
UBC6YER100W ATG4P53867 494 aa5.32□□□□□ -1.56
UBC6YER100W RNT1Q02555 471 aa5.32□□□□□ -1.56
UBC6YER100W YML037CQ03703 340 aa5.32□□□□□ -1.56
UBC6YER100W USV1Q12132 391 aa5.32□□□□□ -1.56
UBC6YER100W TRM13Q12383 476 aa5.32□□□□□ -1.56
UBC6YER100W YOL159C-AQ3E769 90 aa5.32□□□□□ -1.56
UBC6YER100W SES1P07284 462 aaKnown RBP5.31□□□□□ -1.56
UBC6YER100W STE50P25344 346 aa5.31□□□□□ -1.56
UBC6YER100W YIH1P25637 258 aa5.31□□□□□ -1.56
UBC6YER100W RFA2P26754 273 aaKnown RBP5.31□□□□□ -1.56
UBC6YER100W RPF2P36160 344 aaKnown RBP5.31□□□□□ -1.56
UBC6YER100W AAP1P37898 856 aaKnown RBP5.31□□□□□ -1.56
UBC6YER100W LAS21P40367 830 aa5.31□□□□□ -1.56
UBC6YER100W MCM6P53091 1017 aaKnown RBP5.31□□□□□ -1.56
UBC6YER100W SGF73P53165 657 aa5.31□□□□□ -1.56
UBC6YER100W YNL092WP53934 400 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms