RNA–Protein interactions for RNA: YER038C

KRE29, Transcript of Subunit of the SMC5-SMC6 complex, yeast

Gene KRE29, Length 1,395 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE29	YER038C	YHR218W	P38899	603 aa		4.38	□□□□□ -1.71
KRE29	YER038C	BDH2	P39713	417 aa		4.38	□□□□□ -1.71
KRE29	YER038C	MOB1	P40484	314 aa		4.38	□□□□□ -1.71
KRE29	YER038C	TIM54	P47045	478 aa		4.38	□□□□□ -1.71
KRE29	YER038C	TAN1	P53072	289 aa	Predicted RBP	4.38	□□□□□ -1.71
KRE29	YER038C	HST1	P53685	503 aa		4.38	□□□□□ -1.71
KRE29	YER038C	STP1	Q00947	519 aa		4.38	□□□□□ -1.71
KRE29	YER038C	CDD1	Q06549	142 aa		4.38	□□□□□ -1.71
KRE29	YER038C	SGO1	Q08490	590 aa		4.38	□□□□□ -1.71
KRE29	YER038C	YPL216W	Q08964	1102 aa		4.38	□□□□□ -1.71
KRE29	YER038C	MRH1	Q12117	320 aa	Predicted RBP	4.38	□□□□□ -1.71
KRE29	YER038C	MED1	Q12321	566 aa		4.38	□□□□□ -1.71
KRE29	YER038C	CTF3	Q12748	733 aa		4.38	□□□□□ -1.71
KRE29	YER038C	TOR2	P32600	2474 aa	Known RBP	4.38	□□□□□ -1.71
KRE29	YER038C	RPL22A	P05749	121 aa	Known RBP	4.37	□□□□□ -1.71
KRE29	YER038C	MAS1	P10507	462 aa		4.37	□□□□□ -1.71
KRE29	YER038C	APE1	P14904	514 aa		4.37	□□□□□ -1.71
KRE29	YER038C	HSP60	P19882	572 aa	Known RBP	4.37	□□□□□ -1.71
KRE29	YER038C	PRP4	P20053	465 aa	Known RBP	4.37	□□□□□ -1.71
KRE29	YER038C	TRX2	P22803	104 aa	Known RBP	4.37	□□□□□ -1.71
KRE29	YER038C	PGS1	P25578	521 aa		4.37	□□□□□ -1.71
KRE29	YER038C	VPH1	P32563	840 aa	Known RBP	4.37	□□□□□ -1.71
KRE29	YER038C	SAC6	P32599	642 aa	Known RBP	4.37	□□□□□ -1.71
KRE29	YER038C	TFC3	P34111	1160 aa		4.37	□□□□□ -1.71
KRE29	YER038C	YKT6	P36015	200 aa	Known RBP	4.37	□□□□□ -1.71
KRE29	YER038C	CCT5	P40413	562 aa	Known RBP	4.37	□□□□□ -1.71
KRE29	YER038C	HYR1	P40581	163 aa	Known RBP	4.37	□□□□□ -1.71
KRE29	YER038C	TOS3	P43637	560 aa		4.37	□□□□□ -1.71
KRE29	YER038C	POL31	P46957	487 aa		4.37	□□□□□ -1.71
KRE29	YER038C	YPT11	P48559	417 aa		4.37	□□□□□ -1.71
KRE29	YER038C	KEL2	P50090	882 aa		4.37	□□□□□ -1.71
KRE29	YER038C	SPC98	P53540	846 aa		4.37	□□□□□ -1.71
KRE29	YER038C	ASI2	P53895	289 aa		4.37	□□□□□ -1.71
KRE29	YER038C	TIM8	P57744	87 aa		4.37	□□□□□ -1.71
KRE29	YER038C	DON1	Q05610	365 aa		4.37	□□□□□ -1.71
KRE29	YER038C	MLH2	Q07980	695 aa		4.37	□□□□□ -1.71
KRE29	YER038C	CLP1	Q08685	445 aa	Predicted RBP	4.37	□□□□□ -1.71
KRE29	YER038C	HAL9	Q12180	1030 aa		4.37	□□□□□ -1.71
KRE29	YER038C	RRD2	Q12461	358 aa		4.37	□□□□□ -1.71
KRE29	YER038C	NOP14	Q99207	810 aa	Known RBP	4.37	□□□□□ -1.71
KRE29	YER038C	DDP1	Q99321	188 aa	Known RBP	4.37	□□□□□ -1.71
KRE29	YER038C	GAL80	P04387	435 aa		4.36	□□□□□ -1.71
KRE29	YER038C	KGD2	P19262	463 aa	Predicted RBP	4.36	□□□□□ -1.71
KRE29	YER038C	BET2	P20133	325 aa		4.36	□□□□□ -1.71
KRE29	YER038C	SPO11	P23179	398 aa		4.36	□□□□□ -1.71
KRE29	YER038C	VPS3	P23643	1011 aa		4.36	□□□□□ -1.71
KRE29	YER038C	IMG2	P25642	146 aa	Predicted RBP	4.36	□□□□□ -1.71
KRE29	YER038C	LTV1	P34078	463 aa		4.36	□□□□□ -1.71
KRE29	YER038C	FTR1	P40088	404 aa		4.36	□□□□□ -1.71
KRE29	YER038C	UBP6	P43593	499 aa	Known RBP	4.36	□□□□□ -1.71
KRE29	YER038C	FYV8	P46949	817 aa	Known RBP	4.36	□□□□□ -1.71
KRE29	YER038C	REX2	P54964	269 aa	Known RBP	4.36	□□□□□ -1.71
KRE29	YER038C	ADA2	Q02336	434 aa		4.36	□□□□□ -1.71
KRE29	YER038C	NRG1	Q03125	231 aa		4.36	□□□□□ -1.71
KRE29	YER038C	VMS1	Q04311	632 aa	Known RBP	4.36	□□□□□ -1.71
KRE29	YER038C	RSC3	Q06639	885 aa		4.36	□□□□□ -1.71
KRE29	YER038C	YOL075C	Q08234	1294 aa		4.36	□□□□□ -1.71
KRE29	YER038C	LSP1	Q12230	341 aa	Known RBP	4.36	□□□□□ -1.71
KRE29	YER038C	DBP10	Q12389	995 aa	Known RBP	4.36	□□□□□ -1.71
KRE29	YER038C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
KRE29	YER038C	APM4	Q99186	491 aa		4.36	□□□□□ -1.71
KRE29	YER038C	GPA1	P08539	472 aa		4.35	□□□□□ -1.71
KRE29	YER038C	HMG2	P12684	1045 aa		4.35	□□□□□ -1.71
KRE29	YER038C	NAT1	P12945	854 aa	Known RBP	4.35	□□□□□ -1.71
KRE29	YER038C	OM45	P16547	393 aa		4.35	□□□□□ -1.71
KRE29	YER038C	IME1	P21190	360 aa		4.35	□□□□□ -1.71
KRE29	YER038C	PDE1	P22434	369 aa		4.35	□□□□□ -1.71
KRE29	YER038C	PSO2	P30620	661 aa		4.35	□□□□□ -1.71
KRE29	YER038C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
KRE29	YER038C	AGP2	P38090	596 aa		4.35	□□□□□ -1.71
KRE29	YER038C	RIM4	P38741	713 aa		4.35	□□□□□ -1.71
KRE29	YER038C	PCL5	P38794	229 aa		4.35	□□□□□ -1.71
KRE29	YER038C	YER130C	P39959	443 aa		4.35	□□□□□ -1.71
KRE29	YER038C	YJL163C	P46996	555 aa		4.35	□□□□□ -1.71
KRE29	YER038C	SSY5	P47002	699 aa		4.35	□□□□□ -1.71
KRE29	YER038C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
KRE29	YER038C	SLG1	P54867	378 aa		4.35	□□□□□ -1.71
KRE29	YER038C	HCR1	Q05775	265 aa	Known RBP	4.35	□□□□□ -1.71
KRE29	YER038C	RRP9	Q06506	573 aa	Known RBP	4.35	□□□□□ -1.71
KRE29	YER038C	RUD3	Q12234	484 aa	Known RBP	4.35	□□□□□ -1.71
KRE29	YER038C	TPK1	P06244	397 aa		4.34	□□□□□ -1.71
KRE29	YER038C	YKL097C	P34245	136 aa		4.34	□□□□□ -1.71
KRE29	YER038C	PEX5	P35056	612 aa		4.34	□□□□□ -1.71
KRE29	YER038C	BCD1	P38772	366 aa		4.34	□□□□□ -1.71
KRE29	YER038C	SAK1	P38990	1142 aa		4.34	□□□□□ -1.71
KRE29	YER038C	CIR1	P42940	261 aa		4.34	□□□□□ -1.71
KRE29	YER038C	SMC3	P47037	1230 aa		4.34	□□□□□ -1.71
KRE29	YER038C	HSV2	P50079	448 aa	Predicted RBP	4.34	□□□□□ -1.71
KRE29	YER038C	YGR237C	P50089	785 aa		4.34	□□□□□ -1.71
KRE29	YER038C	ART5	P53244	586 aa	Known RBP	4.34	□□□□□ -1.71
KRE29	YER038C	ALG12	P53730	551 aa		4.34	□□□□□ -1.71
KRE29	YER038C	MUS81	Q04149	632 aa	Predicted RBP	4.34	□□□□□ -1.71
KRE29	YER038C	RRB1	Q04225	511 aa	Known RBP	4.34	□□□□□ -1.71
KRE29	YER038C	IWR1	Q07532	353 aa	Predicted RBP	4.34	□□□□□ -1.71
KRE29	YER038C	AFT2	Q08957	416 aa		4.34	□□□□□ -1.71
KRE29	YER038C	LEA1	Q08963	238 aa	Predicted RBP	4.34	□□□□□ -1.71
KRE29	YER038C	SLX4	Q12098	748 aa		4.34	□□□□□ -1.71
KRE29	YER038C	NDJ1	Q12366	352 aa		4.34	□□□□□ -1.71
KRE29	YER038C	YOL098C	Q12496	1037 aa		4.34	□□□□□ -1.71
KRE29	YER038C	FMP27	Q06179	2628 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms