RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W YJR107WP47145 328 aa6.16□□□□□ -1.42
RPT3YDR394W STP1Q00947 519 aa6.16□□□□□ -1.42
RPT3YDR394W SKY1Q03656 742 aa6.16□□□□□ -1.42
RPT3YDR394W BUD22Q04347 519 aaKnown RBP6.16□□□□□ -1.42
RPT3YDR394W NRT1Q08485 598 aa6.16□□□□□ -1.42
RPT3YDR394W SPE3Q12074 293 aaKnown RBP6.16□□□□□ -1.42
RPT3YDR394W KCS1Q12494 1050 aa6.16□□□□□ -1.42
RPT3YDR394W AI5_ALPHAQ9ZZX1 630 aa6.16□□□□□ -1.42
RPT3YDR394W TRP3P00937 484 aa6.15□□□□□ -1.42
RPT3YDR394W YMR085WP0CF18 432 aa6.15□□□□□ -1.42
RPT3YDR394W HSP60P19882 572 aaKnown RBP6.15□□□□□ -1.42
RPT3YDR394W HEM3P28789 327 aa6.15□□□□□ -1.42
RPT3YDR394W RIM1P32445 135 aaKnown RBP6.15□□□□□ -1.42
RPT3YDR394W YKR073CP36153 106 aa6.15□□□□□ -1.42
RPT3YDR394W ETP1P38748 585 aaKnown RBP6.15□□□□□ -1.42
RPT3YDR394W NMD3P38861 518 aaKnown RBP6.15□□□□□ -1.42
RPT3YDR394W RIX1P38883 763 aaPredicted RBP6.15□□□□□ -1.42
RPT3YDR394W PRM9P39551 298 aa6.15□□□□□ -1.42
RPT3YDR394W DPH1P40487 425 aaKnown RBP6.15□□□□□ -1.42
RPT3YDR394W RLP7P40693 322 aaKnown RBP6.15□□□□□ -1.42
RPT3YDR394W RRT5P43607 289 aa6.15□□□□□ -1.42
RPT3YDR394W GCV2P49095 1034 aa6.15□□□□□ -1.42
RPT3YDR394W AZR1P50080 613 aa6.15□□□□□ -1.42
RPT3YDR394W NUT1P53114 1132 aa6.15□□□□□ -1.42
RPT3YDR394W UBX4P54730 416 aa6.15□□□□□ -1.42
RPT3YDR394W ADY3Q07732 790 aa6.15□□□□□ -1.42
RPT3YDR394W AAD4Q07747 329 aa6.15□□□□□ -1.42
RPT3YDR394W OSW1Q08692 278 aa6.15□□□□□ -1.42
RPT3YDR394W YOR022CQ12204 715 aa6.15□□□□□ -1.42
RPT3YDR394W GID7P25569 745 aa6.14□□□□□ -1.43
RPT3YDR394W FUB1P25659 250 aa6.14□□□□□ -1.43
RPT3YDR394W SMI1P32566 505 aa6.14□□□□□ -1.43
RPT3YDR394W SEC6P32844 805 aa6.14□□□□□ -1.43
RPT3YDR394W BEM3P32873 1128 aa6.14□□□□□ -1.43
RPT3YDR394W SLA2P33338 968 aa6.14□□□□□ -1.43
RPT3YDR394W DRE2P36152 348 aa6.14□□□□□ -1.43
RPT3YDR394W OMA1P36163 345 aa6.14□□□□□ -1.43
RPT3YDR394W BIT2P38346 545 aa6.14□□□□□ -1.43
RPT3YDR394W OTU2P38747 307 aaKnown RBP6.14□□□□□ -1.43
RPT3YDR394W YHR219WP38900 624 aa6.14□□□□□ -1.43
RPT3YDR394W STL1P39932 569 aa6.14□□□□□ -1.43
RPT3YDR394W PEP8P40335 379 aa6.14□□□□□ -1.43
RPT3YDR394W ALG5P40350 334 aa6.14□□□□□ -1.43
RPT3YDR394W AXL1P40851 1208 aa6.14□□□□□ -1.43
RPT3YDR394W YJL132WP47014 750 aa6.14□□□□□ -1.43
RPT3YDR394W STB4P50104 949 aa6.14□□□□□ -1.43
RPT3YDR394W TEP1P53916 434 aa6.14□□□□□ -1.43
RPT3YDR394W BET4Q00618 327 aa6.14□□□□□ -1.43
RPT3YDR394W LGE1Q02796 332 aaKnown RBP6.14□□□□□ -1.43
RPT3YDR394W RCR2Q03446 210 aaKnown RBP6.14□□□□□ -1.43
RPT3YDR394W AIM32Q04689 311 aa6.14□□□□□ -1.43
RPT3YDR394W GRX8Q05926 109 aa6.14□□□□□ -1.43
RPT3YDR394W RCL1Q08096 367 aaPredicted RBP6.14□□□□□ -1.43
RPT3YDR394W AAD15Q08361 143 aa6.14□□□□□ -1.43
RPT3YDR394W YIG1Q08956 461 aa6.14□□□□□ -1.43
RPT3YDR394W GPM2Q12008 311 aa6.14□□□□□ -1.43
RPT3YDR394W NBP2Q12163 236 aa6.14□□□□□ -1.43
RPT3YDR394W SUT2Q12286 268 aa6.14□□□□□ -1.43
RPT3YDR394W EFG1Q3E705 233 aaKnown RBP6.14□□□□□ -1.43
RPT3YDR394W HTS1P07263 546 aaKnown RBP6.13□□□□□ -1.43
RPT3YDR394W GCY1P14065 312 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
RPT3YDR394W AMD2P22580 549 aa6.13□□□□□ -1.43
RPT3YDR394W HRR25P29295 494 aaKnown RBP6.13□□□□□ -1.43
RPT3YDR394W PMI40P29952 429 aaKnown RBP6.13□□□□□ -1.43
RPT3YDR394W HEM12P32347 362 aaPredicted RBP6.13□□□□□ -1.43
RPT3YDR394W MET4P32389 672 aa6.13□□□□□ -1.43
RPT3YDR394W CYM1P32898 989 aa6.13□□□□□ -1.43
RPT3YDR394W SRP101P32916 621 aa6.13□□□□□ -1.43
RPT3YDR394W TKL2P33315 681 aa6.13□□□□□ -1.43
RPT3YDR394W MAC1P35192 417 aa6.13□□□□□ -1.43
RPT3YDR394W SWH1P35845 1188 aa6.13□□□□□ -1.43
RPT3YDR394W RDH54P38086 958 aa6.13□□□□□ -1.43
RPT3YDR394W RIM2P38127 377 aa6.13□□□□□ -1.43
RPT3YDR394W FUI1P38196 639 aa6.13□□□□□ -1.43
RPT3YDR394W YBR053CP38235 358 aa6.13□□□□□ -1.43
RPT3YDR394W FSH1P38777 243 aaKnown RBP6.13□□□□□ -1.43
RPT3YDR394W PPE1P38796 400 aa6.13□□□□□ -1.43
RPT3YDR394W CRP1P38845 465 aaKnown RBP6.13□□□□□ -1.43
RPT3YDR394W YAT2P40017 923 aa6.13□□□□□ -1.43
RPT3YDR394W ESL1P40456 1118 aa6.13□□□□□ -1.43
RPT3YDR394W FAR3P46671 204 aa6.13□□□□□ -1.43
RPT3YDR394W MIG2P53035 382 aa6.13□□□□□ -1.43
RPT3YDR394W SPC98P53540 846 aa6.13□□□□□ -1.43
RPT3YDR394W BRE5P53741 515 aaKnown RBP6.13□□□□□ -1.43
RPT3YDR394W IST1P53843 298 aaPredicted RBP6.13□□□□□ -1.43
RPT3YDR394W YNL144CP53907 740 aa6.13□□□□□ -1.43
RPT3YDR394W KTR6P54070 446 aa6.13□□□□□ -1.43
RPT3YDR394W YMR160WQ03823 816 aa6.13□□□□□ -1.43
RPT3YDR394W TAF11Q04226 346 aa6.13□□□□□ -1.43
RPT3YDR394W YSH1Q06224 779 aaPredicted RBP6.13□□□□□ -1.43
RPT3YDR394W RRP36Q12481 300 aaPredicted RBP6.13□□□□□ -1.43
RPT3YDR394W RGS2Q99188 309 aa6.13□□□□□ -1.43
RPT3YDR394W INO1P11986 533 aa6.12□□□□□ -1.43
RPT3YDR394W MSH2P25847 964 aa6.12□□□□□ -1.43
RPT3YDR394W SIN4P32259 974 aa6.12□□□□□ -1.43
RPT3YDR394W RRP14P36080 434 aaKnown RBP6.12□□□□□ -1.43
RPT3YDR394W LAM1P38851 1228 aa6.12□□□□□ -1.43
RPT3YDR394W YJL206CP39529 758 aa6.12□□□□□ -1.43
RPT3YDR394W FRT2P39734 528 aa6.12□□□□□ -1.43
RPT3YDR394W JEM1P40358 645 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms