RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GGA1	YDR358W	APE3	P37302	537 aa	Known RBP	4.82	□□□□□ -1.64
GGA1	YDR358W	MAL33	P38157	468 aa		4.82	□□□□□ -1.64
GGA1	YDR358W	VID24	P38263	362 aa		4.82	□□□□□ -1.64
GGA1	YDR358W	YEL057C	P39983	233 aa		4.82	□□□□□ -1.64
GGA1	YDR358W	BUD16	P39988	312 aa		4.82	□□□□□ -1.64
GGA1	YDR358W	JHD1	P40034	492 aa		4.82	□□□□□ -1.64
GGA1	YDR358W	SEC28	P40509	296 aa	Known RBP	4.82	□□□□□ -1.64
GGA1	YDR358W	MET28	P40573	187 aa		4.82	□□□□□ -1.64
GGA1	YDR358W	SGF73	P53165	657 aa		4.82	□□□□□ -1.64
GGA1	YDR358W	ART5	P53244	586 aa	Known RBP	4.82	□□□□□ -1.64
GGA1	YDR358W	SKG3	Q06315	1026 aa		4.82	□□□□□ -1.64
GGA1	YDR358W	PDH1	Q12428	516 aa	Known RBP	4.82	□□□□□ -1.64
GGA1	YDR358W	YBR255C-A	Q3E776	120 aa		4.82	□□□□□ -1.64
GGA1	YDR358W	PDE1	P22434	369 aa		4.81	□□□□□ -1.64
GGA1	YDR358W	POL4	P25615	582 aa		4.81	□□□□□ -1.64
GGA1	YDR358W	MVD1	P32377	396 aa	Known RBP	4.81	□□□□□ -1.64
GGA1	YDR358W	GEX2	P36173	615 aa		4.81	□□□□□ -1.64
GGA1	YDR358W	PLB1	P39105	664 aa		4.81	□□□□□ -1.64
GGA1	YDR358W	IME4	P41833	600 aa		4.81	□□□□□ -1.64
GGA1	YDR358W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
GGA1	YDR358W	PEX25	Q02969	394 aa		4.81	□□□□□ -1.64
GGA1	YDR358W	ERB1	Q04660	807 aa	Known RBP	4.81	□□□□□ -1.64
GGA1	YDR358W	GTB1	Q04924	702 aa		4.81	□□□□□ -1.64
GGA1	YDR358W	STP3	Q05937	343 aa		4.81	□□□□□ -1.64
GGA1	YDR358W	YPL191C	Q08930	360 aa		4.81	□□□□□ -1.64
GGA1	YDR358W	YBR085C-A	O43137	85 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	SRB5	P32585	307 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	STB6	P36085	766 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	OTU2	P38747	307 aa	Known RBP	4.8	□□□□□ -1.64
GGA1	YDR358W	POP2	P39008	433 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	YJL055W	P47044	245 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	GPI8	P49018	411 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	DLT1	Q04216	342 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	AIM32	Q04689	311 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	ENB1	Q08299	606 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	LAS17	Q12446	633 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	YOL159C-A	Q3E769	90 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	YOR019W	Q99248	730 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	CET1	O13297	549 aa	Predicted RBP	4.8	□□□□□ -1.64
GGA1	YDR358W	VMA2	P16140	517 aa	Known RBP	4.8	□□□□□ -1.64
GGA1	YDR358W	CLB1	P24868	471 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	PUP2	P32379	260 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	MSS1	P32559	526 aa	Predicted RBP	4.8	□□□□□ -1.64
GGA1	YDR358W	AGP2	P38090	596 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	CST26	P38226	397 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	SDH8	P38345	138 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	LNP1	P38878	278 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	REV7	P38927	245 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	PES4	P39684	611 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	MPS3	P47069	682 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	ERG5	P54781	538 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	IZH3	Q07959	543 aa		4.8	□□□□□ -1.64
GGA1	YDR358W	MET3	P08536	511 aa		4.79	□□□□□ -1.64
GGA1	YDR358W	CTP1	P38152	299 aa		4.79	□□□□□ -1.64
GGA1	YDR358W	OAZ1	Q02803	292 aa		4.79	□□□□□ -1.64
GGA1	YDR358W	EFR3	Q03653	782 aa	Known RBP	4.79	□□□□□ -1.64
GGA1	YDR358W	YML037C	Q03703	340 aa		4.79	□□□□□ -1.64
GGA1	YDR358W	YDR341C	Q05506	607 aa	Known RBP	4.79	□□□□□ -1.64
GGA1	YDR358W	TMA10	Q06177	86 aa		4.79	□□□□□ -1.64
GGA1	YDR358W	YPT6	Q99260	215 aa		4.79	□□□□□ -1.64
GGA1	YDR358W	YRF1-4	O13559	1382 aa		4.79	□□□□□ -1.64
GGA1	YDR358W	STF1	P01098	86 aa		4.78	□□□□□ -1.64
GGA1	YDR358W	YML003W	P0CF16	290 aa		4.78	□□□□□ -1.64
GGA1	YDR358W	CAF20	P12962	161 aa	Known RBP	4.78	□□□□□ -1.64
GGA1	YDR358W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
GGA1	YDR358W	YCR051W	P25631	222 aa		4.78	□□□□□ -1.64
GGA1	YDR358W	MRPL7	P36519	292 aa		4.78	□□□□□ -1.64
GGA1	YDR358W	YNG2	P38806	282 aa	Known RBP	4.78	□□□□□ -1.64
GGA1	YDR358W	UBP5	P39944	805 aa		4.78	□□□□□ -1.64
GGA1	YDR358W	LCB2	P40970	561 aa		4.78	□□□□□ -1.64
GGA1	YDR358W	ZIM17	P42844	174 aa		4.78	□□□□□ -1.64
GGA1	YDR358W	MUP1	P50276	574 aa		4.78	□□□□□ -1.64
GGA1	YDR358W	OCA1	P50946	238 aa	Predicted RBP	4.78	□□□□□ -1.64
GGA1	YDR358W	HOS2	P53096	452 aa	Predicted RBP	4.78	□□□□□ -1.64
GGA1	YDR358W	INA17	Q02888	182 aa		4.78	□□□□□ -1.64
GGA1	YDR358W	GYL1	Q04322	720 aa		4.78	□□□□□ -1.64
GGA1	YDR358W	ESC8	Q08119	714 aa		4.78	□□□□□ -1.64
GGA1	YDR358W	SPE4	Q12455	300 aa		4.78	□□□□□ -1.64
GGA1	YDR358W	TRP4	P07285	380 aa	Predicted RBP	4.77	□□□□□ -1.65
GGA1	YDR358W	STE12	P13574	688 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	ABF1	P14164	731 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	YIH1	P25637	258 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	PAP1	P29468	568 aa	Known RBP	4.77	□□□□□ -1.65
GGA1	YDR358W	MGM1	P32266	881 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	ERC1	P38767	581 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	DOT5	P40553	215 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	THI6	P41835	540 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	UBC11	P52492	156 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	IMO32	P53219	342 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	USA1	Q03714	838 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	BUD22	Q04347	519 aa	Known RBP	4.77	□□□□□ -1.65
GGA1	YDR358W	VPS38	Q05919	439 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	ATG29	Q12092	213 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	YER175W-A	Q8TGU4	54 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	CLC1	P17891	233 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	TRX1	P22217	103 aa	Known RBP	4.77	□□□□□ -1.65
GGA1	YDR358W	STE11	P23561	717 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	PDB1	P32473	366 aa	Known RBP	4.77	□□□□□ -1.65
GGA1	YDR358W	YBR053C	P38235	358 aa		4.77	□□□□□ -1.65
GGA1	YDR358W	VID30	P53076	958 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms