RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W YLR352WQ06479 807 aa1.08□□□□□ -2.24
SCC2YDR180W VIP1Q06685 1146 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W MDM36Q06820 579 aa1.08□□□□□ -2.24
SCC2YDR180W RIM20Q12033 661 aa1.08□□□□□ -2.24
SCC2YDR180W MED1Q12321 566 aa1.08□□□□□ -2.24
SCC2YDR180W SCM3Q12334 223 aa1.08□□□□□ -2.24
SCC2YDR180W GTT2Q12390 233 aa1.08□□□□□ -2.24
SCC2YDR180W NSI1Q12457 570 aa1.08□□□□□ -2.24
SCC2YDR180W CCH1P50077 2039 aa1.08□□□□□ -2.24
SCC2YDR180W RPS17AP02407 136 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W TUB2P02557 457 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W TEF1P02994 458 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W MATALPHA2P0CY08 210 aa1.08□□□□□ -2.24
SCC2YDR180W HMLALPHA2P0CY09 210 aa1.08□□□□□ -2.24
SCC2YDR180W RPS17BP14127 136 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W EST1P17214 699 aaPredicted RBP1.08□□□□□ -2.24
SCC2YDR180W FUR1P18562 216 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W FAR1P21268 830 aa1.08□□□□□ -2.24
SCC2YDR180W URE2P23202 354 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W SEC21P32074 935 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W DAL1P32375 460 aa1.08□□□□□ -2.24
SCC2YDR180W RPD3P32561 433 aa1.08□□□□□ -2.24
SCC2YDR180W RPN2P32565 945 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W RAD24P32641 659 aa1.08□□□□□ -2.24
SCC2YDR180W YBL055CP34220 418 aaPredicted RBP1.08□□□□□ -2.24
SCC2YDR180W PRX1P34227 261 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W RRN3P36070 627 aa1.08□□□□□ -2.24
SCC2YDR180W CCZ1P38273 704 aa1.08□□□□□ -2.24
SCC2YDR180W HSL7P38274 827 aa1.08□□□□□ -2.24
SCC2YDR180W TSL1P38427 1098 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W RRM3P38766 723 aa1.08□□□□□ -2.24
SCC2YDR180W QNS1P38795 714 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W RRP8P38961 392 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W TIF4631P39935 952 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W YER158CP40095 573 aa1.08□□□□□ -2.24
SCC2YDR180W ESL1P40456 1118 aa1.08□□□□□ -2.24
SCC2YDR180W MET18P40469 1032 aa1.08□□□□□ -2.24
SCC2YDR180W DPH1P40487 425 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W SMK1P41808 388 aa1.08□□□□□ -2.24
SCC2YDR180W BFA1P47113 574 aa1.08□□□□□ -2.24
SCC2YDR180W MIG2P53035 382 aa1.08□□□□□ -2.24
SCC2YDR180W DSL1P53847 754 aa1.08□□□□□ -2.24
SCC2YDR180W VPS75P53853 264 aa1.08□□□□□ -2.24
SCC2YDR180W VAC7P53950 1165 aa1.08□□□□□ -2.24
SCC2YDR180W RCF1Q03713 159 aa1.08□□□□□ -2.24
SCC2YDR180W BUL2Q03758 920 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W VTI1Q04338 217 aa1.08□□□□□ -2.24
SCC2YDR180W YDR222WQ04925 415 aa1.08□□□□□ -2.24
SCC2YDR180W YLR257WQ06146 321 aaKnown RBP1.08□□□□□ -2.24
SCC2YDR180W MMR1Q06324 491 aa1.08□□□□□ -2.24
SCC2YDR180W YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24not detected
SCC2YDR180W PUS9Q12069 462 aa1.08□□□□□ -2.24
SCC2YDR180W NUC1P08466 329 aa1.07□□□□□ -2.24
SCC2YDR180W TUB1P09733 447 aaKnown RBP1.07□□□□□ -2.24
SCC2YDR180W DAP2P18962 818 aa1.07□□□□□ -2.24
SCC2YDR180W APA2P22108 325 aa1.07□□□□□ -2.24
SCC2YDR180W CNA1P23287 553 aa1.07□□□□□ -2.24
SCC2YDR180W HXT2P23585 541 aa1.07□□□□□ -2.24
SCC2YDR180W FPS1P23900 669 aa1.07□□□□□ -2.24
SCC2YDR180W SWI4P25302 1093 aaKnown RBP1.07□□□□□ -2.24
SCC2YDR180W ITR1P30605 584 aa1.07□□□□□ -2.24
SCC2YDR180W HXT4P32467 576 aa1.07□□□□□ -2.24
SCC2YDR180W CDC12P32468 407 aaKnown RBP1.07□□□□□ -2.24
SCC2YDR180W HIR2P32480 875 aa1.07□□□□□ -2.24
SCC2YDR180W TIF3P34167 436 aaKnown RBP1.07□□□□□ -2.24
SCC2YDR180W APM3P38153 483 aa1.07□□□□□ -2.24
SCC2YDR180W FZO1P38297 855 aa1.07□□□□□ -2.24
SCC2YDR180W TSC10P38342 320 aa1.07□□□□□ -2.24
SCC2YDR180W CTM1P38818 585 aa1.07□□□□□ -2.24
SCC2YDR180W YHR202WP38887 602 aa1.07□□□□□ -2.24
SCC2YDR180W PCF11P39081 626 aaPredicted RBP1.07□□□□□ -2.24
SCC2YDR180W GIP2P40036 548 aa1.07□□□□□ -2.24
SCC2YDR180W VHR1P40522 640 aa1.07□□□□□ -2.24
SCC2YDR180W GVP36P40531 326 aaKnown RBP1.07□□□□□ -2.24
SCC2YDR180W ULP2P40537 1034 aaPredicted RBP1.07□□□□□ -2.24
SCC2YDR180W RLP7P40693 322 aaKnown RBP1.07□□□□□ -2.24
SCC2YDR180W GPD2P41911 440 aaKnown RBP1.07□□□□□ -2.24
SCC2YDR180W ELP2P42935 788 aa1.07□□□□□ -2.24
SCC2YDR180W MSE1P48525 536 aa1.07□□□□□ -2.24
SCC2YDR180W RFX1P48743 811 aa1.07□□□□□ -2.24
SCC2YDR180W RNR4P49723 345 aaKnown RBP1.07□□□□□ -2.24
SCC2YDR180W CTF18P49956 741 aa1.07□□□□□ -2.24
SCC2YDR180W UBP15P50101 1230 aa1.07□□□□□ -2.24
SCC2YDR180W DAM1P53267 343 aa1.07□□□□□ -2.24
SCC2YDR180W BTN2P53286 410 aa1.07□□□□□ -2.24
SCC2YDR180W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.07□□□□□ -2.24not detected
SCC2YDR180W YDR249CQ03787 373 aa1.07□□□□□ -2.24
SCC2YDR180W YDL073WQ07454 984 aa1.07□□□□□ -2.24
SCC2YDR180W XYL2Q07993 356 aa1.07□□□□□ -2.24
SCC2YDR180W ESC8Q08119 714 aa1.07□□□□□ -2.24
SCC2YDR180W YDL109CQ12103 647 aa1.07□□□□□ -2.24
SCC2YDR180W LYS21Q12122 440 aaKnown RBP1.07□□□□□ -2.24
SCC2YDR180W PHM7Q12252 991 aa1.07□□□□□ -2.24
SCC2YDR180W BBP1Q12365 385 aa1.07□□□□□ -2.24
SCC2YDR180W NCA2Q12374 616 aa1.07□□□□□ -2.24
SCC2YDR180W GRX6Q12438 231 aa1.07□□□□□ -2.24
SCC2YDR180W DIF1O13577 133 aa1.07□□□□□ -2.24
SCC2YDR180W CDC6P09119 513 aa1.07□□□□□ -2.24
SCC2YDR180W TAL1P15019 335 aaKnown RBP1.07□□□□□ -2.24
SCC2YDR180W GLK1P17709 500 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms